Lynx rufus (bobcat): 124516031
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Entry
124516031 CDS
T08475
Name
(RefSeq) cysteine protease ATG4C isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04136
Autophagy - other
lruf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124516031
04136 Autophagy - other
124516031
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lruf01002
]
124516031
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124516031
03029 Mitochondrial biogenesis [BR:
lruf03029
]
124516031
Peptidases and inhibitors [BR:
lruf01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
124516031
Membrane trafficking [BR:
lruf04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
124516031
Mitochondrial biogenesis [BR:
lruf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124516031
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
ATG4_LIR
Motif
Other DBs
NCBI-GeneID:
124516031
NCBI-ProteinID:
XP_046941114
LinkDB
All DBs
Position
Unknown
AA seq
458 aa
AA seq
DB search
MEATGTDEVDKLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDENKLLP
ARSGCTIEDHVIAGNVEEFRKDFISRIWLTYREEFPQIEGSALTTDCGWGCTLRTGQMLL
AQGLILHFLGRAWTWPDALNIENSDSESWTSNTVKKFTASFEASLSGERELKTPAVSQKE
TIRRYSDDHEMRNEIYHRKIISWFGDSPLALFGLHQLIEYGKKSGKKAGDWYGPAVVAHI
LRKAVEEARHPDLQGITIYVAQDCTVYSSDVIDKQCTSMASDNTDDKAVIILIPVRLGGE
RTNTDYLDFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKRASEEITKMLKISSKEKYPLFTFVN
GHSRDYDFTSTTTNEEDLFSEDEKKRLKRFSTEEFVLL
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atggaggccacaggaacagatgaagttgacaagctaaaaactaaatttatatctgcttgg
aacaacatgaaatatagttgggtgttgaaaacaaagacatattttagtagaaattcccct
gtattgttgcttggaaaatgttaccattttaaatatgaagatgaaaataaactgttacct
gcaagatcaggatgtacaatagaagatcatgtaattgcgggaaatgtagaagaatttcgt
aaagatttcatttcaagaatatggctgacctacagggaagaatttcctcaaatagaaggc
tcggctttgacaacagactgtggttggggctgtacattaagaactggccagatgctattg
gctcaaggactcatactacactttcttggtagagcttggacctggcctgatgctttgaac
attgaaaattcagactctgaatcatggacttccaacactgtaaaaaaatttactgcatca
tttgaagcatcactttcaggggaaagagaactcaaaaccccagcagtttctcagaaggaa
acaatcaggagatactctgatgatcatgaaatgcgaaatgaaatttatcacaggaaaatc
atctcttggtttggtgattcccctttggctctctttggtttacaccaactaatagaatat
ggaaaaaagtctgggaaaaaagccggagactggtatggaccagctgtggttgctcacatt
ttaagaaaagcagttgaagaagcaagacatcctgatttacaaggaataactatttatgtt
gcacaagactgtacagtttatagttctgatgtaattgataaacagtgcacttccatggcc
tctgataatacagatgacaaagctgttattattctaatccctgttagacttggtggagaa
agaaccaacaccgactacttagattttgtaaagggtattttaagccttgaatattgtgtg
ggtattattggtggcaaacctaaacagtcatactactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc
cctcttgagacattccactgcccttctcccaaaaagatgtcatttcgaaaaatggatcct
agctgtacaataggattttactgtcgaaatgttcaggacttcaaacgagcttctgaagaa
atcactaagatgctgaaaatttcttctaaggagaaataccccttatttacttttgtaaat
ggtcactccagagactatgattttacatctactacaaccaatgaagaagaccttttctca
gaggatgaaaagaaaagattaaaaagatttagcacagaagagtttgtcttgctctaa
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