KEGG   Lynx rufus (bobcat): 124516100
Entry
124516100         CDS       T08475                                 
Name
(RefSeq) BRCA1-associated RING domain protein 1-like
  KO
K10683  BRCA1-associated RING domain protein 1
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    124516100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lruf03019]
    124516100
   04121 Ubiquitin system [BR:lruf04121]
    124516100
   03036 Chromosome and associated proteins [BR:lruf03036]
    124516100
   03400 DNA repair and recombination proteins [BR:lruf03400]
    124516100
Messenger RNA biogenesis [BR:lruf03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Negative regulators of mRNA 3' end processing
     124516100
Ubiquitin system [BR:lruf04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   BRCC complex
    124516100
Chromosome and associated proteins [BR:lruf03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     124516100
DNA repair and recombination proteins [BR:lruf03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    BRCA1-core complex
     124516100
SSDB
Motif
Pfam: zf-RING_6 Ank_4 Ank Ank_2 Ank_5 Ank_3 BRCT BRCT_2 zf-RING_5 zf-C3HC4 ANK_LRRK2 Ank_KRIT1 SICA_C NIBRIN_BRCT_II zf-C3HC4_2 RTT107_BRCT_5
Other DBs
NCBI-GeneID: 124516100
NCBI-ProteinID: XP_046941211
LinkDB
Position
Unknown
AA seq 773 aa
MPGNRQPRVRSGNEPRPAPAMEPEGRGAWAHSRAAFDRLEKLLRCSRCTNILREPVCLGG
CEHIFCSNCVSDCIGTGCPVCYTPAWIQDVKINRQLDSMIQLCSKLRNLLHDNKLSDLKE
DTSRQNVFNDAENKKNSIKMWFSPRSKKVRYVVTKVSVQTQPQVIDDGNAQQASVYKFVS
TSPPTGVPERAKKASTRSGKKQKKKTLAEINQEWNFEAEKEDGEPDSKEEFKEKLVSFCS
QPSVIASPQTNGDIDLLASDSVTESECSRSLTEVSLPLAEQIESPETESRNEDATPEKNA
CVNHLTSKQPLPSGHNGRPGRRSRRSSLISKRCRSSIPGTSGQQMLLSENKPLPGCSSPP
PSKRKVGDTLRRKNSNISDESMSLSPGSPPSTLNSPSYRRMMFSPSAMKLSPGSLTAVKR
NHRGETLLHIASIKGDLPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHK
ALVNSTGYQNDSPLHDAAKNGHMDIVKLLLSYGASRNAVNIFGLRPVDYADGENMKSLLL
LPEENESSSTRHCSVTNTGQRRDGPLVLIGSGLSSEQQKMLSELAVILKAKKCAEFDSTV
THVIVPGDTVQSTLKCMLGILNGCWILKFEWVKACLQRKACEQEEKYEIPEGPQRSRLNK
EQLLPKLFDGCYFYFGGAFKHHPKDNLVKLVTAAGGQVLSRKPKPDSDVTQTINTVAYHA
KADSDQRFCTQYIIFEDLSNHRPERVRQGKVWMAPSSWFIDCVMSFELLPLDS
NT seq 2322 nt   +upstreamnt  +downstreamnt
atgccggggaaccggcagccgagagtccggtccgggaacgagcctcgtcccgcgcccgcc
atggagccggaggggcgcggggcctgggcccacagccgcgccgcgttcgaccggttggag
aagctgctgcgctgctcgcgttgcactaatattctgagggagcctgtgtgtttaggggga
tgtgagcacatcttctgtagtaattgtgtaagtgactgcattggaaccggatgtccagtg
tgttacaccccagcctggatacaagatgtgaagataaatagacagttggacagcatgatc
cagctttgtagtaagctccggaatttgctgcatgacaataagctatcagatttgaaagaa
gacacatctaggcaaaatgtattcaatgatgcagaaaataagaagaattcaataaaaatg
tggtttagtcctcgaagtaagaaggtcagatatgttgtgactaaagtttcagtgcaaacc
cagcctcaagtgatagatgatgggaacgctcagcaggcctcagtgtacaaatttgtctct
acaagtcctccaacaggtgttcctgagagggctaaaaaggcttccacgaggtccggaaaa
aaacaaaaaaagaaaactttagctgaaatcaaccaagaatggaatttcgaggcagaaaaa
gaagatggtgaacctgactccaaagaggaatttaaggaaaagctggtgtctttctgtagc
cagccatctgttatcgctagtcctcagacaaatggtgacatagacttactagcaagtgac
tctgtaaccgaatcggagtgttctagaagcttaactgaagtctctttaccattggctgag
caaatagagtctccagaaacagagagcaggaatgaagacgcgactcctgagaagaatgct
tgtgtgaatcatcttacatctaagcagcccttgccatcaggtcataatgggcgacctgga
cgtcgcagcagacggtccagtctcatttctaagagatgcagaagcagcattcctggcacg
agtgggcagcaaatgctgctttcagaaaacaaaccactgcctggctgctcttcaccacct
ccaagcaaacgtaaagttggtgacacattaaggaggaaaaacagtaatatatcagacgaa
tccatgagcctttcaccaggttcaccaccttctacactgaatagtccaagttacagacgg
atgatgttcagcccttcagcaatgaagctgtctcccggtagccttacagctgtgaaaaga
aatcatagaggagagactttgcttcatattgcttcaattaagggcgacctaccttctgtg
gaatacctcttacaaaatggaagtgacccaaatgttaaagatcatgctggatggacacca
ttgcacgaagcctgcaaccatgggcacctgaaggtggtggaattgttgctacagcacaag
gcgttggtgaactccactgggtatcagaatgattcaccacttcatgacgctgccaagaat
gggcacatggatatagtcaagctcttactttcttatggagcctccaggaacgccgttaac
atatttggtttgcggcctgtggattatgcagacggtgaaaatatgaagtcactattgctg
ctaccagaggagaatgaatcatcatcaactcgccattgctcagtaacaaacactggtcag
cgtagggatggacctctcgtgcttataggcagtgggctttcttcagaacagcaaaaaatg
ctcagtgagcttgcagtgattcttaaggctaaaaaatgtgctgaattcgacagtacagta
actcatgtcattgttcctggagatacagttcaaagtaccctaaaatgtatgcttgggatt
ctcaatggatgttggatcttaaaatttgaatgggtgaaagcatgtctacaaagaaaagca
tgtgaacaagaggaaaagtatgagattcctgaaggaccacagcgaagcaggctcaacaaa
gaacagctgttgccaaagctgtttgatggctgctacttctattttgggggagccttcaaa
caccatccaaaggacaaccttgttaagcttgtcactgcagctgggggccaggttctcagt
agaaagcccaagccggacagcgacgtgactcagaccatcaatactgtcgcgtaccatgcg
aaagctgactccgatcagcgcttctgcacgcagtatatcatctttgaggatctgtctaac
catcgcccagagagggtgcggcagggcaaagtctggatggctccttccagctggtttata
gattgtgtgatgtcctttgagttgctccctcttgacagctaa

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