Lynx rufus (bobcat): 124516159
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Entry
124516159 CDS
T08475
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator isoform X1
KO
K09097
aryl hydrocarbon receptor nuclear translocator
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04066
HIF-1 signaling pathway
lruf04148
Efferocytosis
lruf04934
Cushing syndrome
lruf05200
Pathways in cancer
lruf05207
Chemical carcinogenesis - receptor activation
lruf05208
Chemical carcinogenesis - reactive oxygen species
lruf05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
124516159
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
124516159
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124516159
05207 Chemical carcinogenesis - receptor activation
124516159
05208 Chemical carcinogenesis - reactive oxygen species
124516159
09162 Cancer: specific types
05211 Renal cell carcinoma
124516159
09167 Endocrine and metabolic disease
04934 Cushing syndrome
124516159
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124516159
Transcription factors [BR:
lruf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
124516159
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
PAS_11
PAS
HLH
PAS_9
Per3-like_PAS-A
bHLH_NCOA
bHLH_INO2
Motif
Other DBs
NCBI-GeneID:
124516159
NCBI-ProteinID:
XP_046941313
LinkDB
All DBs
Position
Unknown
AA seq
790 aa
AA seq
DB search
MAATAANPEMTSDVPSLGPAIASGNPGAGIQGGGAIVHRAIKRRSGLDFDDDGEGNSKFL
RCDDDQMSNDKERFARSDDEQSSADKERLARENHSEIERRRRNKMTAYITELSDMVPTCS
ALARKPDKLTILRMAVSHMKSLRGTGNTSTDGTYKPSFLTDQELKHLILEAADGFLFIVS
CETGRVVYVSDSVTPVLNQPQSEWFGSTLYDQVHPDDVDKLREQLSTSENALTGRILDLK
TGTVKKEGQQSSMRMCMGSRRSFICRMRCGNSSVDPVSMNRLSFVRNRCRNGLGSVKDGE
PHFVVVHCTGYIKAWPPAGVSLPDDDPEAGQGSKFCLVAIGRLQVTSSPNCTDMSNVCQP
TEFISRHNIEGIFTFVDHRCVATVGYQPQELLGKNIVEFCHPEDQQLLRDSFQQVVKLKG
QVLSVMFRFRSKNREWLWMRTSSFTFQNPYSDEIEYIICTNTNVKNSSQEPRPTLSNTIQ
RPQLGPTANLPLEMGSGQLASRQQQQQTELDVVSGRDGLAGYNHSQVSVQPVTTTGPEHS
KPLEKSDSLFAQDRDPRFSEIYSNINADQSKGISSSTVPATQQLFSQGNTFPPTPRPAEN
FRNSGLASPVTIVQPSASAGQMLAQISRHSNPPQGAAPTWTPSTRPGFSAQQVATQATAK
TRSSQFGVGSFQTPSSFSPMSLPGASTASPGAAAYPSLTNRGSNFAPETGQTTGQFQTRT
AEGVSVWPQWQGQQPHHRSSSSEQHVQQPSAQQPGQPEVFQEMLSMLGDQSNSYNNEEFP
DLTMFPSFSE
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgactgctgctaaccccgaaatgacatcagatgtaccatcactgggtccagcc
attgcctcaggaaaccctggggctgggattcaaggtggaggagccattgtccacagggct
attaagcggcgatcagggttggattttgatgatgatggagaagggaacagtaaatttttg
aggtgtgatgatgatcagatgtctaatgataaggagcgatttgccaggtcggatgatgag
cagagctctgcggataaagagagactcgccagggagaatcacagtgaaattgaacggcgg
cgacggaacaagatgacagcctacatcacagaactgtcagacatggtgcccacctgtagt
gccctggctcgaaaaccagacaagctaaccatcttacgcatggcagtctctcacatgaag
tccttgcgaggaactggaaatacatccactgatggcacctacaagccttcgttcctcact
gatcaggaactcaaacatttgatcttggaggcagcagatggctttctgtttattgtctca
tgtgagacaggtcgggtggtttatgtctctgactcagtgacccctgttttgaaccagcct
cagtctgaatggtttggtagcacactctatgatcaggtgcatccagatgatgtggacaaa
cttcgtgagcagctttccacttcggaaaatgccctgacagggcgtatccttgatctgaag
actggaacagtgaaaaaggaaggccagcagtcttccatgaggatgtgtatgggctcaagg
agatcgtttatttgccgtatgaggtgtggcaatagctctgtggaccccgtctccatgaat
agactgagctttgtgaggaacagatgcaggaatggacttggctctgtgaaggatggggaa
cctcattttgtggtggtccactgcacaggctatatcaaggcctggcccccagcaggtgtc
tccctcccagatgatgatccagaggctggccaggggagcaaattttgcctagtggccatt
ggcagactacaggtaaccagttctcccaactgtacagacatgagtaacgtttgtcaacca
acagagttcatctctcggcacaacattgaggggatcttcacttttgtggatcaccgctgt
gtggctactgttggctatcaaccacaggaactcttaggaaagaatattgtggaattctgt
catcctgaagaccaacagcttctaagagacagcttccaacaggtggtgaagttaaaaggc
caggtgctgtctgtcatgttccggttccggtctaagaaccgggaatggctctggatgaga
accagctcctttactttccagaacccttactcagatgaaattgagtacatcatctgtacc
aacaccaatgtgaagaactccagccaggaaccaaggcctacactgtccaacacaatccag
agaccacagctaggtcccacagctaatttacccttggagatgggctcagggcagttggca
tccaggcagcagcaacagcaaacagaattggatgtggtatcaggaagagatggactggct
ggctacaatcattcccaggtttctgttcagcctgtaacaaccacagggccagaacacagt
aagccccttgagaagtcagatagtctgtttgcccaggatagagatccaagattttcagaa
atctactctaacatcaatgcagatcagagtaaaggcatctcctccagcactgtccctgct
acccaacagctattctcacagggcaacacattccctcctaccccccggccggcagagaat
ttcagaaatagtggtctggcctctcctgtaaccatcgtccagccatcagcttctgcaggg
cagatgttggcccagatttcccgccactccaacccaccccaaggagcagccccaacttgg
acccctagcacccgcccaggcttctctgcccagcaggtggctactcaggctacagccaag
actcgttcttcccagtttggtgtgggcagctttcagactccgtcctccttcagccccatg
tccctccctggtgcttcaactgcgtcacctggtgctgctgcctaccctagtctcaccaat
cgtggatccaactttgctcctgagactggacagactacaggacaattccagacacggaca
gcagagggtgtaagtgtctggccacagtggcagggccagcagcctcatcatcgctcgagt
tctagcgagcaacatgttcaacagccatcagcacagcaacctggccagcctgaggtcttc
caggagatgctgtccatgctgggagaccagagcaacagctacaacaacgaagaatttcct
gacctaactatgtttccctccttttcagaatag
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integrated database retrieval system
