KEGG   Lynx rufus (bobcat): 124516532
Entry
124516532         CDS       T08475                                 
Name
(RefSeq) splicing factor 3B subunit 1 isoform X1
  KO
K12828  splicing factor 3B subunit 1
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124516532
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lruf03041]
    124516532
   03036 Chromosome and associated proteins [BR:lruf03036]
    124516532
Spliceosome [BR:lruf03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    124516532
 Complex B
    124516532
 Complex C
   U2 SnRNP specific factors
    124516532
Chromosome and associated proteins [BR:lruf03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    124516532
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG DUF2298 TALPID3
Other DBs
NCBI-GeneID: 124516532
NCBI-ProteinID: XP_046941854
LinkDB
Position
Unknown
AA seq 1158 aa
MNARTYMDVMREQHLTKEEREIRQQLAEKAKAGELKVVNGAAASQPPSKRKRRWDQTADQ
TPGATPKKLSSWDQAETPGHTPSLRWDETPGRAKGSETPGATPGSKIWDPTPSHTPAGAA
TPGRGDTPGHATPGHGGATSSARKNRWDETPKTERDTPGHGSGWAETPRTDRGGDSIGET
PTPGASKRKSRWDETPASQMGGSTPVLTPGKTPIGTPAMNMATPTPGHIMSMTPEQLQAW
RWEREIDERNRPLSDEELDAMFPEGYKVLPPPAGYVPIRTPARKLTATPTPLGGMTGFHM
QTEDRTMKSVNDQPSGNLPFLKPDDIQYFDKLLVDVDESTLSPEEQKERKIMKLLLKIKN
GTPPMRKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDL
VRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRN
TTARAFAVVASALGIPSLLPFLKAVCKSKKSWQARHTGIKIVQQIAILMGCAILPHLRSL
VEIIEHGLVDEQQKVRTISALAIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAF
LKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYI
KTEILPPFFKHFWQHRMALDRRNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRK
MVMETIEKIMGNLGAADIDHKLEEQLIDGILYAFQEQTTEDSVMLNGFGTVVNALGKRVK
PYLPQICGTVLWRLNNKSAKVRQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEY
PEVLGSILGALKAIVNVIGMHKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG
AEYVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQER
QNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYI
YAVTPLLEDALMDRDLVHRQTASAVVQHMSLGVYGFGCEDSLNHLLNYVWPNVFETSPHV
IQAVMGALEGLRVAIGPCRMLQYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPR
IYNDDKNTYIRYELDYIL
NT seq 3477 nt   +upstreamnt  +downstreamnt
atgaatgctaggacttacatggatgtaatgcgagaacagcatttaaccaaagaagagaga
gaaattaggcaacaactagcagaaaaagctaaagctggagaattaaaagttgtcaatgga
gcagcagcgtcccagcctccctcaaaacgaaaacggcgttgggatcaaacagccgatcag
actcctggtgccactcctaaaaaactatcaagttgggatcaagcagagacccccggacat
accccttccttaagatgggatgagacaccaggtcgtgcaaagggaagtgagactcctgga
gcaaccccaggctcaaaaatatgggatcctacacctagccacacaccagcgggagctgct
actcctggacgcggcgatacgccaggccatgcaacaccaggccacggaggtgcaacttcc
agtgctcgtaaaaacagatgggatgagacccccaaaacagaaagagatactcctgggcat
ggaagcggatgggctgagactcctcgaacagatcgaggtggagattcaattggtgaaaca
ccaactcctggagccagtaaaagaaagtcacgttgggatgaaacaccagctagtcagatg
ggtggaagcactcctgttctgacacctggaaagacaccaattggcacaccagccatgaac
atggctacccctactccaggtcacataatgagtatgactcccgaacagcttcaagcttgg
aggtgggaaagagaaattgatgagagaaaccgtccactttctgatgaagaattagatgcc
atgtttccagaaggatataaggtacttccccctccagctggttatgttcctattcgaact
ccagctcgaaagctgacagcaactccaacgcctttgggtggtatgactggtttccacatg
caaactgaagatagaacaatgaaaagtgttaatgaccaaccatctgggaatctgccattt
ttaaaacctgatgatattcagtactttgataaacttttggttgatgttgatgaatcaaca
cttagtccagaagagcaaaaagagagaaaaataatgaagcttcttttaaaaattaagaat
ggaacacctccaatgagaaaggctgcattgcgtcagattactgataaagctcgtgaattt
ggagctggtcctttgtttaatcagattcttcctctactgatgtctcctacacttgaggat
caagagcgtcatttacttgtgaaagttattgatcgaatattatacaaacttgatgactta
gttcgaccatatgtgcacaagatccttgtggtcattgaaccattgctaattgatgaagat
tactatgctagagtggaaggtcgagagattatttctaatttggcaaaggctgctggtctg
gctactatgatctctaccatgagacctgatatagataacatggatgagtatgttcgtaac
acaacagctagagcttttgctgttgtagcctctgccctgggcattccttcattgttgccc
ttcttaaaagctgtgtgtaaaagtaagaagtcctggcaagcgagacacactggtattaag
attgtacagcagatagctattcttatgggctgtgccatcttgccacatctcagaagttta
gttgaaatcattgagcatggtcttgtggatgagcaacagaaagttcggaccattagtgct
ttggccattgctgccttggctgaagcagcaactccttatggtatcgaatcttttgattct
gtgttaaagcctctatggaagggtatccgtcaacacagaggaaagggtctggctgctttc
ttaaaggctattggctatcttattcctcttatggatgcagaatatgccaactactatact
agagaagtgatgttaatccttattcgagaatttcagtcacctgatgaagaaatgaagaaa
attgtgctgaaggtggtaaagcagtgttgtggaacagatggtgtagaagcaaactacatt
aaaacagagattcttcctcctttttttaaacacttctggcaacacagaatggctttggat
agaagaaattaccgacagttagttgatactactgtggaattggcaaacaaagtaggtgca
gcagaaattatttccaggattgtggatgatctgaaggatgaagctgaacagtacagaaaa
atggtgatggagacaattgagaaaattatgggcaacttgggagcagcagatattgatcat
aaacttgaagaacagttgattgatggtattctttatgctttccaagaacagactacagag
gactctgtaatgttgaatggctttggcacagtggtcaatgctcttggcaaacgagtcaaa
ccttacttgcctcagatctgtggtacagttttgtggcgtttaaataacaaatcagcaaaa
gttaggcaacaggcagctgacttgatttctcgaactgctgttgtcatgaagacttgtcaa
gaggaaaaattgatggggcacttgggtgttgttttgtatgagtatttgggtgaagagtac
cctgaagtattgggcagcattcttggagcgttgaaggccattgtaaatgtaataggtatg
cataagatgaccccaccaattaaagatctcctgcctagactcacccccatcttaaagaac
aggcatgaaaaagtacaagagaattgtattgatcttgttggacgtattgctgacagggga
gctgagtatgtgtctgcgagagaatggatgaggatttgttttgagcttctggagctctta
aaagctcacaaaaaagctattcgtagagccacagtcaacacatttggttacattgcaaag
gccattggtcctcatgatgtattggctacactcttaaacaacctcaaagttcaggaaagg
cagaacagagtttgtaccactgtagcaatagctattgttgccgaaacgtgttcacccttc
acagtactacctgccttaatgaatgaatacagagttcctgagctgaatgtccaaaatgga
gtcttaaaatcactttccttcttgtttgaatatattggtgaaatgggaaaggactacatt
tatgctgtaacaccattacttgaagatgctttaatggatagggaccttgtacacagacag
acggctagtgcagtggtgcaacacatgtcacttggggtttatggatttggttgtgaagat
tcactgaatcacttgttgaactatgtatggcccaatgtgtttgagacatcgccccatgta
attcaagcagttatgggagccctggagggcctgagagttgctattggaccatgtagaatg
ttacagtattgtttacagggtttgtttcacccggcccggaaagtcagagacgtgtattgg
aaaatttacaactccatctacattggttcacaggatgctctcatagcacattacccaaga
atctacaatgatgataagaacacctatattcgttatgaacttgactatatcttataa

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