Lynx rufus (bobcat): 124516639
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Entry
124516639 CDS
T08475
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04136
Autophagy - other
lruf04140
Autophagy - animal
lruf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
124516639
04136 Autophagy - other
124516639
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
124516639
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124516639
03029 Mitochondrial biogenesis [BR:
lruf03029
]
124516639
Membrane trafficking [BR:
lruf04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
124516639
Others
Specific organelles associated proteins
Auto phagosome
124516639
Mitochondrial biogenesis [BR:
lruf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
124516639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG16
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_WDR90_POC16_2nd
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_RFWD3
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
CCDC93_CC
Beta-prop_DCAF12
Beta-prop_Nup120_160
eIF2A
TolB_like
Vma22_CCDC115
Fez1
Phage_GPO
Motif
Other DBs
NCBI-GeneID:
124516639
NCBI-ProteinID:
XP_046942049
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MSSGLRAADFPRWKRHISEELRRRDRLQRQAFEEIILQYNKLLEKSDLHSVLAHKLQAEK
HDVPNRHEISPGHDGAWNDSQLQEMAQLRIKHQEELTELHKKRGELAQLVIDLNNQMQQK
DREMQMNEAKIAECLQTISDLETECQELRGKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEENQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEQDDDI
EVIVDETSDHAEETSPVRAISRAATKRLSQPAGGLLDSITNIFGRRSVSSFPVPQDNVDT
HPGSSKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVFGDKCEFKG
SLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDYRLRHTLTGHSGKVLSAKFLLDN
ARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRSES
IVREMELLGKVTALDLNPERTELLSCSRDDLLKIIDLRVNAVRQTFSAPGFKCGSDWTRV
VFSPDGGYVAAGSAEGSLYVWSVLSGKVEKVLSKQHGPLTPDLHPAVEEASRDREHGGHR
EDRQGCTKPRYLQEDLPGQIGKWYRSEQLDAVFLKELFQE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgggcctccgcgccgccgacttcccccgctggaagcgccacatttcggaggag
ctgaggcggcgggaccggctgcagaggcaggcatttgaagagatcatcctgcagtataac
aagttgctagaaaagtcagatcttcattcagtgctggcccataagctacaagctgaaaag
catgacgtccccaacaggcatgagataagtcctggccacgacggtgcatggaatgatagt
cagctacaagaaatggcccagctgaggattaaacaccaagaagaactgactgaattacac
aagaaacgtggggagttagctcagttggtgattgacctgaataaccaaatgcagcagaag
gatagggagatgcagatgaatgaagcaaaaattgcagagtgcttgcagaccatctctgac
ctggagacagagtgccaagaactgcgtggtaagcttcaggacctcgaaagagccaaccag
accctgaaggatgagtatgatgccctgcagatcacgtttactgccttggaggagaaactg
aggaaaactactgaagagaaccaggagctggtcaccagatggatggccgagaaagcccag
gaagccaaccgcctcaatgcagagaatgagaaggattcaaggcggcggcaagcccggctg
cagaaagagcttgcagaagcggcaaaggaacctctacctgttgaacaggatgatgacatt
gaagtcatcgtggatgaaacctctgatcacgccgaggagacttctcctgtgcgagccatc
agcagagcggccactaagcgactctcgcagcctgctggaggccttctggattctatcact
aatatctttgggaggcgctctgtctcttcctttccagttccccaggataacgtggatact
catcctggttctagtaaagaagtgagggtgccaacgaccgccatatgtgtctttgacgct
catgatggggaagtcaacgctgtgcagttcagtccgggctcccggttgctggccacagga
ggcatggatcggagagttaagctttgggaagtgtttggagataaatgtgagttcaagggc
tccctgtccggcagtaatgcaggaattacaagcattgaatttgacagtgctggatcttac
ctcttagcagcttcaaatgattttgcaagtcgaatctggactgtggatgattatcggtta
cggcacacgctcacaggacacagcggcaaagtgctgtctgccaagttcctgctggacaac
gcgcgcattgtttccggaagtcatgaccggaccctcaagctctgggatctccgcagcaaa
gtctgcataaagaccgtgtttgcaggatccagctgcaacgatatcgtctgcacagagcag
tgtgtgatgagtggacacttcgacaagaaaattcgtttctgggacatccgatcggagagc
atcgtccgggagatggagctgctgggcaaggtcactgccctggacttaaacccggagaga
accgaactcctcagctgctctcgcgatgatcttctaaaaatcatcgatcttcgagtaaac
gccgtcagacagacgtttagcgcccctgggttcaagtgcggctctgattggaccagagtt
gtgttcagccctgacggtggttacgtggcagcgggctcggctgagggctccctctacgtc
tggagcgtgctctcggggaaagtggagaaggtcctttcaaagcagcatggccctctaaca
cctgacttacatcccgcggtggaagaagcttccagggacagagaacatggcggccatcgg
gaagaccggcaaggctgcaccaaaccacgttatcttcaagaagatctcccgggacaaatc
ggtaagtggtacagaagtgagcaacttgatgcagtttttttaaaggagctttttcaagaa
tag
DBGET
integrated database retrieval system
