KEGG   Lynx rufus (bobcat): 124516978
Entry
124516978         CDS       T08475                                 
Name
(RefSeq) protocadherin-12
  KO
K16499  protocadherin delta 2
Organism
lruf  Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lruf04515]
    124516978
Cell adhesion molecules [BR:lruf04515]
 Cadherins
  Protocadherins
   124516978
SSDB
Motif
Pfam: Cadherin Cadherin_2 Syndecan
Other DBs
NCBI-GeneID: 124516978
NCBI-ProteinID: XP_046942103
LinkDB
Position
Unknown
AA seq 1205 aa
MIRLLPLLLGLLGPGGYLFLPGGCQEVATLTVRYQVSEEVPSGTVIGKLSRELGWEERHG
QTGTAFQILQLPQALPIRVDPEDGLLSTGRRLDREQLCRQQDPCLVSFDVLATGDLALIH
VEIQVLDINDHEPQFPKGEQELEISESASLRTRIPLDRALDPDTGPNTLHSYTLSPSEHF
ALDVIVGPDETKHAELVVVKELDREIHSFFDLVLTAYDSGTPPKSGTSLVKVNVLDSNDN
SPVFAESSLALEIQEDAAPGTLLINLTATDPDQGPNGEVEFFLSKHVPPEVLDTFSIDAK
TGQVILRQPLDYEKNPAYEVDVQARDLGPNPIPAHCKVLIKVLDVNDNAPSIHITWASQP
SLVSEALPKDSFIALVMANDLDSGNNGLVHCWLSQELGHFRLKRTNGNTYMLLTNTTLDR
EQWPKYTLTLLAQDQGPQPLSARKQLSIHISDANDNAPVFEKSRYEVSTRENNLPSLHLI
TIKAHDADLGINGKISYRIQESPVSHLVAIDSDTGEVTARRSLDYEHMAGFEFRVIAEDW
GQPQLASSVSVWVSLLDVNDNAPEVIHPVLVDGKASLSVLVNASTGHLLVPVETPNGLGP
VGADTTPLTTHSSRLFLLTTIVARDADSGANGELLYSIRSGNEARLFVLNPHLGQLFINI
TNASSLIGSEWELEVVVEDRGSPSLQTRALLSVLFVTSVDHLRDRAREPGTLSTSVLTVI
CLVVLLAIFGLVLALIMSICRTEKKDSGVYNCREAKSTYRHQPKRPQKHIQKADIHLVPV
LRGQVDEPSEVGQPHQEAGKEGTMEAGWDPCLQAPFHLTPTLYRTLRNQGNQGALAESQE
VLQDTVNLLFHHPRQRNASRENLNIPESQPVMGQPRSRPPKAMGSPAGRLPGDAGSEEAP
LSPPASSATLRRQRNLNGKVTPEKETGPRQILRSLVRLSVAAFAERNPVEELTMDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPSGGRSTVPDTDGPGARAGSQAEPDQEEGPLD
SEDDLSVKQLLEEELSNLLDPHTGLALDRLSVPDPAWMARLSLPLTTNYRDNVFSPDTPA
MEEPRTFQTFGKATGPELSLTGTQLASTFVSEMSSLLEMLLEQRSSVPVEAASEVLRRLS
VCGRTLSLDLATSGASGAEGQGGPGGKKGAEGRTGSSSSSRGLWIQEPGMLGSPGAKDPG
TRAAF
NT seq 3618 nt   +upstreamnt  +downstreamnt
atgatacgacttctgccacttctgctggggcttttggggccaggtggctacttgttcctt
ccagggggttgtcaggaggtggccactctcactgtgagataccaagtgtcagaagaagtg
ccgtctggcacagtgataggcaagctgtcccgggaactgggctgggaggagaggcatggg
caaacggggactgccttccagatcttgcagctgcctcaggcgctccccatccgggtggat
cctgaggacggcctgcttagcacagggaggcggctggacagagagcagctttgccggcag
caggatccctgcttggtttcctttgacgtgcttgccacaggggatttggctctgatccac
gtagagatccaggtgctggacatcaatgaccatgagccacagtttcctaaaggcgagcag
gagctggaaatctctgagagtgcctctctgcgcacccggatacccttggacagagctctg
gacccagacactggccccaacaccctgcactcctacacgctgtcccccagcgagcacttt
gccctggatgtcattgtagggcctgatgagaccaaacatgcggaacttgtggtggtgaag
gagctagacagggaaatccactcattttttgatctggtgctaactgcctatgacagtggg
accccccccaagtcaggcaccagcttggtcaaggtcaatgtcctggactccaatgacaac
agccctgtgtttgctgagagctcactagcactagaaattcaagaagatgctgcccctggt
actctcctcataaacttgactgccacggaccctgatcaaggccccaatggggaggtggag
ttcttcctcagtaagcacgtgcctccagaggtgctggacaccttcagtattgatgcaaag
acgggccaagtgattctgcgtcaacccctagactacgagaagaatcctgcctatgaggtg
gatgtccaggcaagggacttgggtcccaatcccatcccagcccattgcaaagtactcatc
aaggttctggacgtcaatgacaatgccccaagcatccacattacatgggcctcccagcca
tcgctggtatcagaggctcttccaaaggatagtttcattgctctcgtcatggcaaatgac
ttggactcaggaaataatggtctggtccactgttggctgagccaagaactgggtcacttt
agactgaaaaggacaaatggcaatacatacatgctactaaccaacaccacactggacaga
gagcagtggcccaaatatacactcactctgttggctcaagaccaaggaccccagccctta
tcagccagaaaacagctcagcattcacatcagtgatgccaatgacaatgcacctgtgttt
gagaagagcaggtatgaggtctctactcgggaaaacaacctaccttctcttcacctcatt
accatcaaggctcatgacgcagacttgggcattaatggaaaaatctcataccgtatccag
gaatccccagtttctcacttggtagctattgattcagacacaggagaggtcactgctcgg
aggtcactggactatgaacacatggctggttttgagtttcgcgtgatcgcagaggactgg
gggcagcctcaacttgcatccagcgtctctgtgtgggtcagcctcttggatgtcaacgat
aatgccccagaggtgattcatcctgtcctcgttgatggaaaagccagcctctcagtgctc
gtaaatgcctccacaggccaccttctggtacccgttgaaactcctaatggcttgggtcca
gtgggtgctgatacaacgccactgacaacccacagttcccggctgttccttttgacaaca
attgtagcaagagatgcagactcaggtgcaaatggagagctcctctacagtattaggagt
ggaaatgaagcccgtctctttgttctcaacccccacctggggcagttgttcatcaacatc
accaatgccagcagtctcattgggagtgagtgggagctggaggtagtggtagaagaccgt
ggcagcccctccttgcagacccgagccctgttgagcgtcttgtttgtcaccagtgtggac
cacttgagggacagggcccgtgagcctgggaccctgagcacatcggtgctgacagtgatt
tgcctggtcgtacttctggccatctttgggttggtcttggctctgatcatgtccatctgc
cggacagagaagaaggacagtggggtgtacaactgtcgggaggctaagtctacctatcgc
caccagcccaagaggccccagaaacacattcagaaggcagacatccaccttgtgcctgtg
ctcaggggtcaggtggatgagcccagcgaggttgggcagccccaccaggaggcaggcaag
gaagggacgatggaagcaggctgggacccctgcctacaggccccctttcacctcactcca
accctgtacaggaccctgcgtaaccaaggcaaccagggagcattggctgagagccaagag
gtgctgcaggacactgtcaacctccttttccaccatcctaggcagaggaacgcctccagg
gagaacctgaacattcctgagtcccagcctgtgatgggccagccacgctcaaggccccca
aaggctatgggcagccccgcagggaggctgccaggagacgcaggcagcgaggaggctcca
ctgagtccaccggcctcctctgcaaccctgaggcggcagcggaatctcaatggaaaagtg
acccctgagaaagagacaggtccccgtcagatcctgcggagcctggtccggctatctgtg
gctgcctttgcagagcggaaccctgtggaggaactcacgatggattcccctcctgttcag
caaatctcccagctgctgtccttgctgcatcagggccaattccagcccaaaccaaaccac
cggggaaataagtacttggccaagcccagcggcggcaggagcacagtcccagacacagat
ggcccaggtgccagggctggtagccaggcagaaccagaccaggaggaagggcccctggat
tctgaagatgatctctctgtgaagcagctgctagaagaagagctgtcaaacctgttggac
ccccacacaggcttggccctggaccggctgagcgtccctgacccggcctggatggcgagg
ctctctttgcccctcaccacgaactaccgtgacaacgtgttctcaccagacactccggcc
atggaggagccaaggacctttcagacgttcggcaaggcgacggggcctgagctgagcctg
acaggcacgcagctggccagcacctttgtctcggagatgagctcactgttggaaatgctg
ctcgaacaacgctccagcgtgcctgtggaggctgcctccgaggtgctgcggaggctctct
gtctgcgggaggaccctcagtctggacctggccaccagcggggcctcgggcgcagaagga
caggggggcccaggtggaaagaagggggccgagggcaggactggcagcagcagcagcagc
agggggctgtggatccaagaaccagggatgttagggagcccaggcgctaaggatcctggg
acacgagctgctttctaa

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