Lynx rufus (bobcat): 124516978
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Entry
124516978 CDS
T08475
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lruf04515
]
124516978
Cell adhesion molecules [BR:
lruf04515
]
Cadherins
Protocadherins
124516978
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Syndecan
Motif
Other DBs
NCBI-GeneID:
124516978
NCBI-ProteinID:
XP_046942103
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MIRLLPLLLGLLGPGGYLFLPGGCQEVATLTVRYQVSEEVPSGTVIGKLSRELGWEERHG
QTGTAFQILQLPQALPIRVDPEDGLLSTGRRLDREQLCRQQDPCLVSFDVLATGDLALIH
VEIQVLDINDHEPQFPKGEQELEISESASLRTRIPLDRALDPDTGPNTLHSYTLSPSEHF
ALDVIVGPDETKHAELVVVKELDREIHSFFDLVLTAYDSGTPPKSGTSLVKVNVLDSNDN
SPVFAESSLALEIQEDAAPGTLLINLTATDPDQGPNGEVEFFLSKHVPPEVLDTFSIDAK
TGQVILRQPLDYEKNPAYEVDVQARDLGPNPIPAHCKVLIKVLDVNDNAPSIHITWASQP
SLVSEALPKDSFIALVMANDLDSGNNGLVHCWLSQELGHFRLKRTNGNTYMLLTNTTLDR
EQWPKYTLTLLAQDQGPQPLSARKQLSIHISDANDNAPVFEKSRYEVSTRENNLPSLHLI
TIKAHDADLGINGKISYRIQESPVSHLVAIDSDTGEVTARRSLDYEHMAGFEFRVIAEDW
GQPQLASSVSVWVSLLDVNDNAPEVIHPVLVDGKASLSVLVNASTGHLLVPVETPNGLGP
VGADTTPLTTHSSRLFLLTTIVARDADSGANGELLYSIRSGNEARLFVLNPHLGQLFINI
TNASSLIGSEWELEVVVEDRGSPSLQTRALLSVLFVTSVDHLRDRAREPGTLSTSVLTVI
CLVVLLAIFGLVLALIMSICRTEKKDSGVYNCREAKSTYRHQPKRPQKHIQKADIHLVPV
LRGQVDEPSEVGQPHQEAGKEGTMEAGWDPCLQAPFHLTPTLYRTLRNQGNQGALAESQE
VLQDTVNLLFHHPRQRNASRENLNIPESQPVMGQPRSRPPKAMGSPAGRLPGDAGSEEAP
LSPPASSATLRRQRNLNGKVTPEKETGPRQILRSLVRLSVAAFAERNPVEELTMDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPSGGRSTVPDTDGPGARAGSQAEPDQEEGPLD
SEDDLSVKQLLEEELSNLLDPHTGLALDRLSVPDPAWMARLSLPLTTNYRDNVFSPDTPA
MEEPRTFQTFGKATGPELSLTGTQLASTFVSEMSSLLEMLLEQRSSVPVEAASEVLRRLS
VCGRTLSLDLATSGASGAEGQGGPGGKKGAEGRTGSSSSSRGLWIQEPGMLGSPGAKDPG
TRAAF
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgatacgacttctgccacttctgctggggcttttggggccaggtggctacttgttcctt
ccagggggttgtcaggaggtggccactctcactgtgagataccaagtgtcagaagaagtg
ccgtctggcacagtgataggcaagctgtcccgggaactgggctgggaggagaggcatggg
caaacggggactgccttccagatcttgcagctgcctcaggcgctccccatccgggtggat
cctgaggacggcctgcttagcacagggaggcggctggacagagagcagctttgccggcag
caggatccctgcttggtttcctttgacgtgcttgccacaggggatttggctctgatccac
gtagagatccaggtgctggacatcaatgaccatgagccacagtttcctaaaggcgagcag
gagctggaaatctctgagagtgcctctctgcgcacccggatacccttggacagagctctg
gacccagacactggccccaacaccctgcactcctacacgctgtcccccagcgagcacttt
gccctggatgtcattgtagggcctgatgagaccaaacatgcggaacttgtggtggtgaag
gagctagacagggaaatccactcattttttgatctggtgctaactgcctatgacagtggg
accccccccaagtcaggcaccagcttggtcaaggtcaatgtcctggactccaatgacaac
agccctgtgtttgctgagagctcactagcactagaaattcaagaagatgctgcccctggt
actctcctcataaacttgactgccacggaccctgatcaaggccccaatggggaggtggag
ttcttcctcagtaagcacgtgcctccagaggtgctggacaccttcagtattgatgcaaag
acgggccaagtgattctgcgtcaacccctagactacgagaagaatcctgcctatgaggtg
gatgtccaggcaagggacttgggtcccaatcccatcccagcccattgcaaagtactcatc
aaggttctggacgtcaatgacaatgccccaagcatccacattacatgggcctcccagcca
tcgctggtatcagaggctcttccaaaggatagtttcattgctctcgtcatggcaaatgac
ttggactcaggaaataatggtctggtccactgttggctgagccaagaactgggtcacttt
agactgaaaaggacaaatggcaatacatacatgctactaaccaacaccacactggacaga
gagcagtggcccaaatatacactcactctgttggctcaagaccaaggaccccagccctta
tcagccagaaaacagctcagcattcacatcagtgatgccaatgacaatgcacctgtgttt
gagaagagcaggtatgaggtctctactcgggaaaacaacctaccttctcttcacctcatt
accatcaaggctcatgacgcagacttgggcattaatggaaaaatctcataccgtatccag
gaatccccagtttctcacttggtagctattgattcagacacaggagaggtcactgctcgg
aggtcactggactatgaacacatggctggttttgagtttcgcgtgatcgcagaggactgg
gggcagcctcaacttgcatccagcgtctctgtgtgggtcagcctcttggatgtcaacgat
aatgccccagaggtgattcatcctgtcctcgttgatggaaaagccagcctctcagtgctc
gtaaatgcctccacaggccaccttctggtacccgttgaaactcctaatggcttgggtcca
gtgggtgctgatacaacgccactgacaacccacagttcccggctgttccttttgacaaca
attgtagcaagagatgcagactcaggtgcaaatggagagctcctctacagtattaggagt
ggaaatgaagcccgtctctttgttctcaacccccacctggggcagttgttcatcaacatc
accaatgccagcagtctcattgggagtgagtgggagctggaggtagtggtagaagaccgt
ggcagcccctccttgcagacccgagccctgttgagcgtcttgtttgtcaccagtgtggac
cacttgagggacagggcccgtgagcctgggaccctgagcacatcggtgctgacagtgatt
tgcctggtcgtacttctggccatctttgggttggtcttggctctgatcatgtccatctgc
cggacagagaagaaggacagtggggtgtacaactgtcgggaggctaagtctacctatcgc
caccagcccaagaggccccagaaacacattcagaaggcagacatccaccttgtgcctgtg
ctcaggggtcaggtggatgagcccagcgaggttgggcagccccaccaggaggcaggcaag
gaagggacgatggaagcaggctgggacccctgcctacaggccccctttcacctcactcca
accctgtacaggaccctgcgtaaccaaggcaaccagggagcattggctgagagccaagag
gtgctgcaggacactgtcaacctccttttccaccatcctaggcagaggaacgcctccagg
gagaacctgaacattcctgagtcccagcctgtgatgggccagccacgctcaaggccccca
aaggctatgggcagccccgcagggaggctgccaggagacgcaggcagcgaggaggctcca
ctgagtccaccggcctcctctgcaaccctgaggcggcagcggaatctcaatggaaaagtg
acccctgagaaagagacaggtccccgtcagatcctgcggagcctggtccggctatctgtg
gctgcctttgcagagcggaaccctgtggaggaactcacgatggattcccctcctgttcag
caaatctcccagctgctgtccttgctgcatcagggccaattccagcccaaaccaaaccac
cggggaaataagtacttggccaagcccagcggcggcaggagcacagtcccagacacagat
ggcccaggtgccagggctggtagccaggcagaaccagaccaggaggaagggcccctggat
tctgaagatgatctctctgtgaagcagctgctagaagaagagctgtcaaacctgttggac
ccccacacaggcttggccctggaccggctgagcgtccctgacccggcctggatggcgagg
ctctctttgcccctcaccacgaactaccgtgacaacgtgttctcaccagacactccggcc
atggaggagccaaggacctttcagacgttcggcaaggcgacggggcctgagctgagcctg
acaggcacgcagctggccagcacctttgtctcggagatgagctcactgttggaaatgctg
ctcgaacaacgctccagcgtgcctgtggaggctgcctccgaggtgctgcggaggctctct
gtctgcgggaggaccctcagtctggacctggccaccagcggggcctcgggcgcagaagga
caggggggcccaggtggaaagaagggggccgagggcaggactggcagcagcagcagcagc
agggggctgtggatccaagaaccagggatgttagggagcccaggcgctaaggatcctggg
acacgagctgctttctaa
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integrated database retrieval system