KEGG   Lynx rufus (bobcat): 124517128
Entry
124517128         CDS       T08475                                 
Name
(RefSeq) WD repeat-containing protein 7
  KO
K24738  rabconnectin-3b
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf04142  Lysosome biogenesis
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04142 Lysosome biogenesis
    124517128
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lruf04131]
    124517128
Membrane trafficking [BR:lruf04131]
 Endosome - Lysosome transport
  Acidification regulators
   Rabconnectin-3 complex
    124517128
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz Beta-prop_WDR36-Utp21_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WD40_Gbeta Beta-prop_EML CFAP251_N WDR55 EIF3I ASA1 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_VPS8 WD40_MABP1-WDR62_2nd Beta-prop_NOL10_N DSE1_N Beta-prop_Aladin Beta-prop_ACSF4 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_SCAP PAC11 NBCH_WD40 Beta-prop_WDR19_1st WDR90_beta-prop_4th PEP5_VPS11_N WDR72_alpha-sol Ge1_WD40 Beta-prop_Vps41 Tricorn_2nd PD40 Beta-prop_DCAF4 LRS4 Arminin
Other DBs
NCBI-GeneID: 124517128
NCBI-ProteinID: XP_046942348
LinkDB
Position
Unknown
AA seq 1454 aa
MAGNSLVLPIVLWGRKAPTHCISAVLLTDDGTTIVTGCHDGQICLWDLSVELEVNPRALL
FGHTASITCLSKACASTDKQYIVSASESGEMCLWDVNDGRCIEFTKLACTHTGIQFYQFS
VGNQKEGRLLCHGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAL
SVTGILKVWIVTSEISGMQDTEPIFEEESKPIYCQNCQSISFCAFTQRSLLVVCSKYWRV
FDAGDYSLLCSGPSENGQTWTGGDFVSADKVIIWTENGQSYIYRLPASCLPASDSFRSDV
GKAVENLIPPVQHSLLDRTDKELLICPPVTRFFYGCREHIHKLLIQGDSSGRLNIWNISD
TPDKQEELKMTTSISLQEAFDKLNPCPAGIIDQLSVIPNSSEPLKVTASVYIPAHGRLVC
GREDGSIIIVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCLLYPHQVSARYDQR
YLISGGVDFSVIIWDIFSGEMKHIFCVHGGEITQLLVPPENCSARVQHCICSVASDHSVG
LLSLREKKCIMLASRHLFPVQVIKWRPSDDYLVVGCSDGSVYVWQMDTGALDRCVMGITA
VEILNACDEAVPAAADSLSHPAINLKQAMTRRSLAALKNMAHHKLQTLATNLLASEASDK
GNLPKYSHNSLMVQAIKTNLTDPDIHVLFFDVEALIIQLLTEEASRPNTALISPENLQKA
SGSSDKGGSFLTGKRAAVLFQQVKETIKENIKEHLLDDEEEDEEIMRQRREESDPEYRAS
KSKPLTLLEYNLTMDTAKLFMSCLHAWGLNEVLDEVCLDRLGMLKPHCTVSFGLLSRGGH
MSLMLPGYNQPARKLSHGKAEVGRKLPAAEGAGKGTYGVSRAVTTQHLLSIISLANTLMS
MTNATFIGDHMKKGPTRPPRPSTPDLSKARGSPPTSSNIVQGQIKQGWSQLAAMHCVMLP
DLLGLDKFRPPLLEMLARRWQDRCLEVREAAQALLLAELRRIEQAGRKEAIDAWAPYLPQ
YMDHVISPGVSAEAMQTIGTAPDALGPEAKVQEEEHDLADDDITTGCLSSIPQMKKISTS
YEERRKQATAIVLLGVIGAEFGAEIEPPKLLTRPRSSSQIPEGFGLTSGGSNYSLARHTC
KALTFLLLQPPSPKLPPHSTIRRTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQL
ANITMGLPLSPAADSARSARHALSLIATARPPAFITTIAKEVHRHTALAANTQSQQSVHT
TALARAKGEVLRVIEILIEKMPTDVVDLLVEVMDIIMYCLEGSLVKKKGLQECFPAICRF
YMVSYYERNHRIAVGARHGSVALYDIRTGKCQTIHGHKGPITAVAFAPDGRYLATYSNTD
SHISFWQMNTSLLGSIGMLNSAPQLRCIKTYQVPPVQPASPGSHNALRLARLIWTSNRNV
ILMAHDGKEHRFMV
NT seq 4365 nt   +upstreamnt  +downstreamnt
atggcaggaaacagccttgtcctacccattgttctttggggtcgcaaagcaccaacacat
tgcatctcagcggtacttttaacagacgacgggaccacgattgtaactggatgccatgat
ggacaaatatgtctctgggatctctcagtagaattggaagttaatcctcgagcactgttg
tttggtcacacagcctcaatcacctgtttgtctaaagcttgtgcttctactgacaaacag
tatattgtgagcgcgtctgaaagtggagagatgtgtctttgggatgtgaatgatggcaga
tgtattgaatttacaaaattagcctgcacacatacaggcatacagttctaccagttttct
gttggaaatcagaaagaaggcaggcttctgtgccatggccactaccctgaaatcctcgtt
gtggatgccaccagccttgaggtgttatactccttagtatcaaagatctctccagactgg
attagctccatgagtattattcgatcccatcgaacacaagaggatactgtggtagccctt
tcagtgacgggcatcttgaaggtgtggattgtcacctctgaaataagtggcatgcaggat
actgagccaatatttgaggaggaatccaaaccaatttattgtcagaattgccaaagcatt
tctttttgtgcattcacacaaagatcgcttttggttgtgtgctccaaatattggagggta
tttgatgctggagattattccttgctgtgttcaggtcctagtgaaaacggacagacgtgg
actggaggtgactttgtatcagcagataaagtaatcatttggactgaaaatggacaaagt
tatatttacagactacctgccagttgccttccagctagtgattcattccgcagtgatgta
gggaaagcagttgaaaatttaattcctcccgtacagcatagcctcttggaccgaacagat
aaagagttactaatttgtcctcctgttactcggttcttctacggatgcagggaacacatt
cataaactcttaattcaaggtgattcttcaggaagattgaatatttggaacatatcagac
acacctgataaacaggaagagctgaaaatgacaacctcgattagcttgcaagaagcattt
gataaactgaatccttgtcctgctggaattatagatcagctgagcgtgattcccaatagt
agtgaacctcttaaagtcaccgcaagcgtgtacatcccggctcacggacgacttgtctgt
ggccgtgaggacggaagcatcattattgtgcccgccacccagacggccatcgtgcagctg
ctgcaaggggaacacatgctccgccgaggttggccacctcacagaacactccgtggtcat
cggaacaaagtcacatgtttgctatatcctcatcaggtctcagctcgttatgatcaaaga
tacctgatatctggaggtgtggatttttcagtcataatttgggacatattttctggagaa
atgaagcacatcttctgtgtgcatggtggcgagattactcaacttctagttccacctgaa
aactgtagtgcaagagtgcagcactgtatctgctccgtagccagtgaccactcagtagga
ctcctaagtctgcgagagaaaaaatgcattatgctggcatctcgtcatctgttccccgtt
caagtaatcaagtggaggccttctgatgattacctagtagtgggatgttcagatggctcg
gtgtacgtctggcaaatggacactggcgcgttggatcgctgcgtgatggggataaccgcc
gtagagatactgaatgcctgtgatgaagcagttcccgctgcggctgactcacttagtcac
ccagccatcaacctcaagcaggctatgacccggcgtagtcttgctgctcttaaaaacatg
gcccatcataagctccagactcttgcaactaacctcttggcttccgaggcatctgacaaa
gggaatttacctaaatattcccataactccctgatggttcaagcaataaagacaaaccta
acagatccggacatacatgtgcttttctttgatgtggaagcgttgattattcaactcttg
actgaagaagcctctaggccgaataccgcgcttatttccccagagaatttgcaaaaagca
tctggcagttcagacaaagggggctcttttctaactggaaaacgagcagcagttctcttc
caacaagtgaaagaaaccatcaaagagaacataaaggaacatctccttgatgatgaagag
gaggatgaggagataatgaggcagaggagggaagaaagcgatccagaataccgggccagc
aaatctaagccattgaccctattagaatataatttaacaatggacactgcaaaattgttc
atgtcctgtcttcacgcctggggtttaaatgaagttctggatgaagtttgtcttgatcgc
cttggaatgctgaaaccccattgcacagtatcttttggtctcctgtctcgaggaggtcat
atgtcattgatgcttcctggttataatcagcctgctcgtaaactatcacatgggaaagcg
gaagtaggaaggaagctgccagcagccgagggcgcaggaaagggaacttacggagtgtcc
cgagccgtcaccacccagcatctactgtctatcatatctttggcaaatacgttaatgagt
atgaccaacgcaacgtttattggtgatcatatgaagaagggtcctaccaggccacctcga
ccaagcaccccagacctttctaaggcaaggggttcccctccaacttccagtaatattgtg
caaggacagattaaacaaggatggagtcagttggctgctatgcattgtgttatgctgcca
gacctgctgggattggacaagtttaggcctccacttctagagatgctggctcggagatgg
caagatcgatgcttggaggtcagagaagccgcgcaggccctgcttctagctgaactgaga
agaattgagcaagcaggacggaaggaagccattgatgcctgggccccgtacttacctcag
tatatggaccatgtcatatcacctggagtctcagcagaagccatgcagactatcggcact
gctcctgatgccctggggccagaagccaaagtccaggaagaagagcatgaccttgcagat
gatgacatcacaaccggttgcttatcaagtatcccacaaatgaaaaagatttccacatct
tatgaggaaagacggaagcaagctactgctattgttttactaggagtcataggagctgaa
tttggtgctgaaattgaacctcccaaattgttgaccagaccgcgaagctctagccagatt
cctgagggatttggcttgactagtggtggatccaactactcactggccagacacacttgt
aaggcgctgacatttctactgttgcagcccccgagccccaaactgcccccccacagcacg
atccgaagaacagccattgatctgattggccgtggcttcacagtctgggagccttacatg
gacgtgtctgcagtcctcatggggcttctcgaactttgtgctgatgccgagaaacagctt
gccaacatcacaatggggctgcctcttagcccggctgctgactccgcccgctctgcgagg
cacgccctctcgctcattgccactgccagaccacccgccttcatcacaactatcgccaaa
gaggtgcacagacacacagctcttgcagcaaatacccagtcacagcagagcgtgcacaca
acagctcttgcacgagctaaaggggaagttctgagagtcattgagattcttattgaaaag
atgcccacagatgttgtggatcttctcgtagaggttatggacatcattatgtactgcctt
gaaggatctttagttaaaaagaaaggtcttcaagaatgtttcccagccatctgcaggttc
tacatggtcagctattatgagcggaatcacagaatagccgttggagctcgccacggttca
gtggccctgtacgacatccggactggaaaatgtcagacgatccatggacacaagggacca
atcactgcagtggcctttgctcctgatggacgatatcttgccacctactcaaatacggac
agccacatttctttctggcagatgaacacgtcgctgctgggaagcatcggcatgctgaac
tcggcccctcagctgcgctgcatcaaaacctaccaggtgccgcccgtgcagcccgcctcg
cccggctcgcacaacgccctccgcctggcccggctcatctggacgtccaaccgcaacgtc
atcctcatggcccacgacgggaaggagcaccgcttcatggtctag

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