Lynx rufus (bobcat): 124517147
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Entry
124517147 CDS
T08475
Name
(RefSeq) transcription factor SOX-1
KO
K09267
transcription factor SOX1/3/14/21 (SOX group B)
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124517147
Transcription factors [BR:
lruf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
124517147
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
124517147
NCBI-ProteinID:
XP_046942446
LinkDB
All DBs
Position
Unknown
AA seq
393 aa
AA seq
DB search
MYSMMMETDLHSPGGAQAPTNLSGPAGAGGGGGGGGGGGGGGGGVAKANQDRVKRPMNAF
MVWSRGQRRKMAQENPKMHNSEISKRLGAEWKVMSEAEKRPFIDEAKRLRALHMKEHPDY
KYRPRRKTKTLLKKDKYSLAGGLLAAGAGGGGAAVAMGVGVGVGAAAVGQRLESPGGAAG
GGYAHVNGWANGAYPGSVAAAAAAAAMMQEAQLAYGQHPGAGGAHPHAHPAHPHPHHPHA
HPHNPQPMHRYDMGALQYSPISNSQGYMSASPSGYGGLPYGAAAAAAAAAGGAHQNSAVA
AAAAAAAASSGALGALGSLVKSEPSGSPPAPAHSRAPCPGDLREMISMYLPAGEGGDPAA
AAAAAAQSRLHSLPQHYQGAGAGVNGTVPLTHI
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgatgatggagaccgacctgcactcgcctggcggcgcccaggcccccacg
aacctgtcgggcccggccggggcgggcggcggtgggggtggcggtggcggcggcggcggc
ggcggcggcggggtcgccaaggccaaccaggaccgggtcaagcggcccatgaacgccttc
atggtgtggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaac
tcggagatcagcaagcgcctgggcgccgagtggaaggtcatgtccgaggccgagaagcgg
ccgttcatcgacgaggccaagcggctgcgcgcgctgcacatgaaggagcacccggattac
aagtaccggccgcgccgcaagaccaagacgctgctcaagaaggacaagtactcgctggcc
ggcgggctgctggcggccggcgcgggcggcggcggcgcggcggtggccatgggcgtgggc
gtgggcgtgggcgcggcggccgtgggccagcgcctggagagcccgggcggcgcggcgggc
ggcggctacgcgcacgtcaacggctgggccaacggcgcctaccccggctcggtggcggcg
gcggcggcggccgcggccatgatgcaggaggcacagctggcctacgggcagcacccgggc
gcgggcggcgcgcacccgcacgcccacccggcgcacccgcacccgcaccacccgcacgcg
cacccgcacaacccgcagcccatgcaccgctacgacatgggcgcgctgcagtacagcccc
atctctaactcgcagggctacatgagcgcctcgccctcgggctacggcggcctcccctac
ggcgccgcggccgccgccgccgccgccgcgggcggcgcgcaccagaactcggccgtggcg
gcggcggcagcggcggcggccgcgtcgtcgggcgccctgggcgcgctgggctcgctcgtc
aagtccgagcccagcggcagcccgcccgcccccgcgcactcgcgggcgccgtgccccggg
gacctgcgcgagatgatcagcatgtacttgcccgccggcgagggcggagacccggcggcg
gccgcggcggccgcggcgcagagcaggctgcactcgctgccgcagcactaccagggcgcg
ggcgcgggcgtcaacggcacggtgcccctgacgcacatttag
DBGET
integrated database retrieval system
