Lynx rufus (bobcat): 124517246
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Entry
124517246 CDS
T08475
Name
(RefSeq) ATP-dependent RNA helicase DHX29 isoform X1
KO
K18995
ATP-dependent RNA helicase DHX29 [EC:
5.6.2.6
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
lruf03012
]
124517246
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
124517246
Translation factors [BR:
lruf03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
124517246
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UBA_DHX29
OB_NTP_bind
Helicase_C
DEAD
DSRM_DHX29
HA2_C
AAA_22
HA2_N
nSTAND3
AAA_16
ATPase
AAA_19
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
124517246
NCBI-ProteinID:
XP_046942519
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MGGKNKKHKAPGAAAVRAAVSASRAKSAEAGAAGEAQNKKPVARPPPAAAASTREPRVKQ
GPKIYSFNSTNDSGGPANLDKSILKVVINHKLEQRIIGVINEHKKQNNDKGVISGRLTAK
KLQDLYMALQAFSFKTKDIEDAMTNTLLQGGDLHSALDWLCLNLSDDALPEGFSQEFEEQ
QTKSKPKFQSPQIPATVSPPLQPKIKKPEDTKIKPKKEEKNLEVNMKAWILQYAEQQNEE
EKSENSKSLEEEKFDPNERYLHLAAKLLDAKEQAATFKLEKNKQGQKEAQEKIRKFQREM
ETLEDHPVFNPAIKISHQQNERKKPLVATEEERALNFNLFEKSVAATEEEKEKKKEPHDV
RNFDYTARSWTGKSPKQFLIDWVRKNLPKSPNPSFEKVPVGRYWKCRVRVIKSEDDVLVV
CPTILTEDGMQAQHLGATLALYRLVKGQSVHQLLPPTYRDVWLEWSDAEKKKEELNKMET
NKPRDLFIAKLLNKLKQQQQQQQQHSENKRENSEDPEESWENLVSDEDFSALSLESEKAE
DLEPVRALFRKLQSTPKYQRLLKERQQLPVFKHRNSIVETLKRHRVVVVAGETGSGKSTQ
VPHFLLEDLLLNEWGASKCNIVCTQPRRISAVSLATRVCDELGCENGPGGRNSLCGYQIR
MESRASESTRLLYCTTGVLLRKLQEDGLLTNVSHVIVDEVHERSVQSDFLLIILKEILQK
RSDLHLILMSATVDSEKFSTYFTHCPILRISGRSYPVEVFHLEDIIEETGFVLEKDSEYC
QKFLEEEEEITINVTSKAGGIKKYQEYIPVQTGSSADLNPFYQKYSSRTQHAILYMNPHK
INLDLILELLIYLDRSPQFRNVEGAVLIFLPGLAHIQQLYDLLSTDRRFFSERYKVIALH
SILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKYHESSQMSS
LVETFVSKASALQRQGRAGRVRDGFCFRMYTRERFEGFMDYSVPEILRVPLEELCLHIMK
CSLGSPEDFLAKALDPPQLQVISNAMNLLRKIGACELNEPTLTPLGQHLAALPVNVKIGK
MLIFGAIFGCLDPVATLAAVMTEKSPFTTPIGRKDEADLAKSALAMADSDHLTIYNAYLG
WKKSRQEGGYRSEIAYCRRNFLNRTSLLTLEDVKQELIKLVKAAGFSSSTASNDWEGNRA
SHTLSFQEIALLKAVLAAGLYDNVGKIIYTKSVDVTEKLACIVETAQGKAQVHPSSVNRD
LQTYGWLLYQEKVRYTRVYLRETTLITPFPVLLFGGDIEVQHRERLLSVDGWIYFQAPVK
IAVIFKQLRVLIDSVLRKKLENPKMSLENDKILQIITELIKTENKN
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgggaggcaagaacaagaaacacaaggcgcccggggccgcggcggtccgggccgccgtg
tctgcttccagagccaaatccgccgaggccggagctgctggggaggcccaaaacaagaag
ccggtggccaggccgccccccgcagctgccgctagcaccagggagccccgagtcaagcaa
ggtccgaaaatttatagttttaattctacaaatgattctggaggtcctgcaaatctggat
aaatctattttgaaagtggtaattaatcacaaactagagcaaagaattattggagtgata
aatgagcataaaaagcaaaataatgacaaaggagtgatttctggaagacttactgccaaa
aaattacaggatttatacatggctttacaagcattttcatttaagactaaagacattgaa
gatgccatgactaacacactcttgcagggaggtgatctccattctgccttggattggctc
tgtttaaatctttcagatgatgcacttcctgaaggattcagtcaagaatttgaagagcaa
caaactaaaagtaagccaaaattccagtctcctcaaataccagccactgtttcacctcca
ttgcaacctaaaatcaaaaaaccagaagatactaagattaagccaaaaaaggaagaaaaa
aatttggaagtaaatatgaaagcatggattttgcagtatgccgaacagcaaaatgaagaa
gaaaagagtgagaattctaaaagtttagaagaggaaaaatttgaccctaatgaaaggtac
ttgcaccttgcagcaaaacttctggatgcaaaggagcaggcagctacctttaaactagaa
aaaaacaagcaaggccaaaaagaggctcaagaaaaaataaggaaatttcaaagagaaatg
gaaactttagaagaccatccagtattcaatccagccataaagatttcacatcaacagaat
gaaaggaaaaagcctcttgtagccacagaagaagaaagggctttgaactttaacttattt
gaaaaatctgtagctgctactgaagaagagaaagagaaaaagaaagaacctcatgatgta
agaaattttgactatacagctcgaagctggactggaaaatctcccaaacaatttctgatc
gattgggtcaggaagaatcttcccaagagtccaaatccttcctttgaaaaagttccagta
ggtagatactggaaatgtagggtaagagtaatcaagtctgaagatgacgtactggtagta
tgccctacaatcttaacagaagatggcatgcaagctcagcacctgggagcaactctagct
ctgtaccgtttagtgaaagggcagtctgtgcaccagttacttcctcccacttaccgagat
gtttggttggagtggagtgatgcagaaaagaaaaaggaagaattaaataaaatggaaacc
aataagccacgtgatctttttattgccaaacttctgaacaaattgaaacagcagcagcag
cagcagcaacaacattctgaaaataagagagaaaactctgaagatcctgaggaatcttgg
gaaaatttagtttctgatgaggatttttctgcactgtccttggaatcagaaaaggcagaa
gatttggaacctgttagagccctctttaggaagttgcaaagcacacctaagtaccagaga
cttctaaaggaaaggcagcagttaccagtgttcaagcataggaattcaattgttgaaact
cttaaaaggcaccgggtagtggttgtggcaggtgaaacggggagtggcaaaagtactcaa
gtaccacatttcctcttggaagatttgcttctaaatgagtggggagctagtaagtgtaac
attgtctgcacccagccccgaagaatctcagcagtgagtttagccacaagagtatgtgat
gagttgggctgtgaaaatggacctggaggaaggaattctttgtgtggatatcagatccgg
atggaatctcgagctagtgaatctacaaggttactctattgtacaacaggagttttgcta
aggaaacttcaggaagatggtctcctaaccaatgtgtctcatgttattgtagacgaggtt
catgaaagaagcgtccagtcagacttcttactaattatcttgaaggaaattttacagaaa
cgctctgatctacacttgattctaatgagtgccactgtagacagtgaaaagttttccacg
tatttcacacactgccctattcttagaatttcaggaagaagctatcctgtggaggttttt
catcttgaagatataatagaagaaacaggatttgtactggagaaagactcagaatattgt
cagaaatttctggaggaggaagaagaaataaccattaatgttacaagcaaagcaggggga
ataaaaaagtaccaggaatatataccagttcagactggatcaagtgctgatttaaatcca
ttttaccaaaagtatagtagccgcactcagcatgctattctctacatgaatcctcataaa
atcaaccttgatctcattttggaacttcttatatatttagacagaagtccccaattcaga
aatgttgaaggagcagtgttgatctttttaccaggccttgctcatattcaacagctgtat
gatctcctgtcaactgacagaagatttttttctgaacgatataaagtgatagctctgcat
tctattctttcaactcaagaccaagctgcagcattcacacttcctcctcctggagtcagg
aagattgttttagcaacaaatattgcagagacaggtatcactattccagatgttgtattt
gtaattgacactggaagaacaaaagaaaataagtaccatgaaagcagtcagatgagttct
ttggttgagacatttgtcagtaaagcaagtgctctgcagcgccagggcagagctgggagg
gtcagagatggcttctgcttccgaatgtacacaagagaaagatttgaaggttttatggac
tattctgtccctgaaattttgcgtgtgcctctggaggagttatgtcttcatattatgaaa
tgcagtcttggttctcctgaagatttccttgccaaagctttagatcctcctcagcttcaa
gtgatcagcaatgcaatgaatttactccgaaagattggagcatgtgaactaaatgagcct
acactgactccattgggccagcaccttgcagccctgcctgtgaatgtcaagattggcaag
atgcttatttttggtgccatatttggctgccttgacccagtggcaacactagctgcggtg
atgacagagaagtctccttttactacaccaattggtcgaaaagatgaggcagatcttgca
aaatcagctttggctatggctgattcagaccacctgacgatctacaatgcatacctagga
tggaagaagtcccggcaagaaggaggctatcgttctgaaattgcgtattgtcggaggaat
tttcttaatagaacatcactgttaaccctagaagatgtaaagcaggagttaataaagttg
gttaaggcagcaggattttcatcatccacagcatctaatgactgggaaggaaacagagcc
tcacacacactgtccttccaagaaattgcccttcttaaagctgtattggctgctggacta
tatgacaacgtgggaaagatcatctatacaaaatcagttgatgttacagaaaaattggct
tgtattgtggagacagcccaaggcaaagctcaagtacatccctcctcagtaaatcgagat
ttgcaaacttatggatggctcttataccaagagaaggtaaggtatacccgagtatatttg
agggaaactaccctaataaccccttttccagttttactttttggtggtgatatagaagtt
caacaccgggaacgtcttctttctgttgatggctggatctattttcaggcccctgtaaaa
atagctgtcattttcaagcagcttagagttcttattgattccgttttaagaaaaaagctt
gaaaatcctaagatgtcccttgaaaatgacaagatactacagatcattacagaattgata
aaaacagagaataagaactga
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integrated database retrieval system
