Lynx rufus (bobcat): 124517518
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Entry
124517518 CDS
T08475
Name
(RefSeq) transcription factor GATA-6
KO
K17897
GATA-binding protein 6
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124517518
Transcription factors [BR:
lruf03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
124517518
BRITE hierarchy
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Paralog
GFIT
Motif
Pfam:
GATA-N
GATA
DUF7573
Zn_Ribbon_TF
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-GeneID:
124517518
NCBI-ProteinID:
XP_046942821
LinkDB
All DBs
Position
Unknown
AA seq
593 aa
AA seq
DB search
MALTDGGWCLPKRFGAAAADASDSGAFPAREPSTPPSPISSSSSSCCSRGGERGPGGASN
CRTPQLDTEAAAGPPARSLLLSPYASHPFGAPHGPSAPGVAGPGSALSSWEDLLLFTDLD
QAATASKLLWSSRGAKLSPFAPEQPEEMYQTLAALSSQGPAAYDGAPGGFVHSAAAAAAA
AAAASSPVYVPTTRVGSMLPGLPYLQGAGSGPANHAGGAGAHPGWPQASADSPPYGSAGG
AAGGGAAGPGSAGSAAAHVSARFPYSPSPPVANGAARDPGGYAAAGGGGAGGVGGGGGGS
LAAMGGREHQYSSLSAARPLNGTYHHHHHHHPNPYSPYVGAPLTPAWPAGPFETPVLHSL
QSRAGAPLPVPRGPSADLLEDLPESRECVNCGSIQTPLWRRDGTGHYLCNACGLYSKMNG
LSRPLIKPQKRVPSSRRLGLSCANCHTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLA
MKKEGIQTRKRKPKNINKSKACSGSSNNSVPMTPTSTSSNSDDCSKNTSPTTQPTSSGAG
TSVMSGAGESTNPENSELKYSGQDGLYIGVSLASPAEVTSSVRQDSWCALALA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggccttgactgacggcggctggtgcctgccgaagcgcttcggggccgcggctgccgac
gccagcgactccggagcctttccagcgcgggagccctccacgccgccttcccccatctcc
tcttcttcctcctcctgctgctcccggggtggggagcgtggccccggcggcgccagcaac
tgcaggacgcctcagctcgatacggaggcagcggcgggacccccggcccgctcgctgctg
ctcagcccatacgcctcgcatcccttcggggctccccacggaccttcggcgcccggggtc
gcaggccccgggagcgccctgtcgagctgggaggacctactgctcttcactgacctcgac
caggccgcgacagccagcaagctgctgtggtccagccgcggcgccaagctgagccccttc
gcccccgagcagcccgaggagatgtaccagaccctcgccgccctctccagccaggggccg
gccgcttacgacggcgcgcccggcggcttcgtgcactcggcagccgccgccgcagcggcc
gcggccgcggccagctccccagtctacgtgcccaccacccgcgtaggctccatgctaccg
ggcctgccgtacctgcagggggcgggcagcgggcccgccaaccacgcgggcggcgccggc
gcgcaccccggctggcctcaggcctcggccgacagccccccgtacggcagcgcgggcggc
gcggccggcggtggggccgcagggcccggcagcgccggctcggcagcagcgcacgtctct
gcgcgcttcccctactcgcccagcccgcccgtggccaacggcgcggcgcgggaccccggg
ggctacgcggcggcgggtggcggtggcgctggcggcgtgggcggcggcggcggcggcagc
ctggcggccatgggcggccgcgagcaccagtacagctcgctgtcggccgcgcggccgctg
aacgggacctaccaccatcaccatcaccaccacccgaacccctactcgccctacgtgggt
gcgccgctgactcccgcctggcccgcaggacctttcgagaccccagtcctgcacagcctg
cagagccgtgccggagccccgctcccggtcccgcggggccccagtgcagacctgctggag
gacctgcctgaaagccgtgagtgcgtgaactgcggctccatccagacgccgctgtggcgg
cgggacggtaccggccactacctgtgcaacgcctgcggcctctacagcaagatgaacggc
ctcagtcggcccctcatcaagccgcagaagcgcgtgccttcctcccggcggcttggattg
tcctgtgccaactgccacaccacaaccaccactttgtggcgcagaaatgctgaaggcgaa
cctgtgtgcaatgcttgtggactctacatgaagctccatggggtgcctcgaccgcttgct
atgaaaaaagagggaattcaaaccaggaaaagaaaacctaagaacataaataagtcaaaa
gcttgctctggtagtagcaataattctgttcctatgactccaacttccacctcttctaac
tcagatgactgcagcaaaaacacttcccctacaacacaaccgacatcctcaggggcgggc
acctcagtgatgtctggcgcgggagagagcactaatcctgagaacagcgagctcaagtac
tcaggtcaagatgggttgtacataggcgtcagcctggcctctccggctgaagtcacatcc
tcggtgagacaggattcctggtgcgccctcgccctggcctga
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