Lynx rufus (bobcat): 124517697
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Entry
124517697 CDS
T08475
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124517697
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124517697
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
U-box type E3
124517697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
124517697
NCBI-ProteinID:
XP_046943078
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAEAYAIGKKEKPPFLP
EEPSSSSEEDDPIPDELLCLICKDIMTDAVVIPCCGNSYCDECIRTALLESDDHTCPTCH
QNDVSPDALIANKFLRQAVNNFKNETGYTKRLRKQLPPPQPAIPPPRPLIQRNLQPLMRS
PISRQQDPLMIPVTSSTHPAPSISSLTSNQSSLAPPVPGNSSSTPAPVPDITATVSISVH
SEKPDGPFRDSDNKILPAAALASEHSKGTSSIAITALMEEKGYQVPVLGTPSLLGQSLLH
GQLIPTTGPVRINTARPGGGRPGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSER
SQRTQGPSLPATPVFVPVPPPPLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVPP
PGFPPAPANLSTPWVSSGVQTAHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEF
TNDFAKELMEYKKIQKERRRSFSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSR
SHSRSYSRSPPYPRRGRGKSRNYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQSP
NKRNVPQGETEREYFNRYREVPPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEKY
YKGYAAGAQPRPSANRENFSPERFLPLNIRNSPFTRGRREDYAGGQSHRSRNLGGNYPEK
LSTRDSHNQKDNTKSKEKESENNPGDGKGNKHKKHRKRRKGEESEGFLNPELLETSRKSR
EPTSSEENKTDSLFVLPSRDDATPVRDEPMDAESITFKSVSEKDKREKDKPKAKGDKTKR
KNDGSTVSKKENVAKPAKGPQEKLDGEREKSPRSEPPLKKAKEETPKTDNAKSSSSSQKD
EKTIGTPRKAHSKSAKEHQETKPVKEEKVKKDYPKDVKSEKLTNKEEKAKKPSEKSKPPD
SKGEKRKRKTEEKSVEKDFESSSTKVSKLEMTEIVKPSPKRKMEPDIEKMDRTPEKDKIS
SSTAPAKKIKLNRETGKKIGSTENVSNTKEPSEKLESASSKVKQEKVKGKVRRKVAGAEG
SSSTLVDYTSTSSTGGSPVRKSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSK
WDKDDFESEEEDVKATQPMSSVGKPASVIKNVSTKPLNTVKYTEKESESSEKIQKLTKEV
SHEIIQHEIKSSKNSASSEKGKAKDRDHSVLEKENPEKRKNSTQPEKESNLDRLSEPGNF
KSLSQSSKETRTSEKHDSVRGSSTKDFTPNRDKKTDYDNREYSSSKRRDERNELTRRKDS
PSRSKDSASGQKTKPREERDLPKKGTGDSKKSNSSPSRDKKPHDHKATYDTKRSTEETKS
VDKNPCKDREKHTLEARNNKESGGNKLLYVLNPPDPQIEKEQVTGQTDKSAVKPKPQLSH
SSRLSSDLTRETDEAAFEPDYNESDSESNISVKEEETSGKIAKELKDKVVEKAKDSLDTA
AASQVGTARSQSPSSPSVSPSRSHSPSGSRTRSHSSSASSAESQDSKKKKKKKEKKKHKK
HKKHKKHKKHAGTEGELEKSQKHKHKKKKSKKSKDKEKEKEKDDQKAKSVPV
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctctaaactcaactatgataccgtcacctttgat
gggctccacatctccctctgcgatttaaagaagcagattatggggagagagaagttgaaa
gctgccgactgcgacctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgctctaattcctaagaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacatatgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcatctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaacctctaggcccaccacctccatcttatacc
tgttttcgttgtggtaaacctggccattacattaagaattgcccaacaaacggggataaa
aactttgaatctggtccgaggattaaaaagagcactggtattcccagaagttttatgatg
gaagtgaaagatcctaacatgaaaggtgcaatgcttaccaacactggaaagtatgcgata
ccgactatagacgcagaagcatatgcaattgggaagaaagaaaaaccacctttcttacca
gaggaaccatcttcttcttcagaagaagatgatcctatcccagatgaattattgtgtctc
atctgcaaagatattatgactgatgccgttgtcattccctgctgtggaaacagttattgc
gatgaatgtataagaacagcactcttggaatcagatgatcatacatgtccaacatgccat
cagaatgatgtctctcctgatgctttaattgccaataagttcttacgacaggctgttaat
aacttcaaaaatgaaaccggttatacaaaaagactacgaaaacagttacccccaccacag
cccgcaataccacctccgagaccactcattcagcggaacttacaacctctgatgagatct
ccaatatcaagacaacaggatcccctgatgattccagtgacctcttcaactcacccagct
ccttctatatcttcattaacttctaatcagtcttccttggcccctcctgtgcctggaaat
tcatcttctaccccggctcctgtacctgatataactgccacagtgtccatctcagtccac
tctgaaaaaccagatggacctttccgggattctgataataaaatattaccagctgcagcc
cttgcatcagaacattcaaagggaacctcttcaattgcaattactgctcttatggaagag
aagggttaccaggtgcctgtacttggaaccccatctttgcttggacagtcactactgcat
ggacagttgatccccacaactggtccagtaagaataaatactgctcgtccgggtggtggt
cgaccaggttgggaacattccaataagcttggatatctggtttctccgccacagcaaatt
agaaggggggagaggagctgctacagaagtataaaccgcggacgacaccacagcgaaaga
tcacagagaactcaaggcccatcactaccagcaactccagtttttgtgcctgtcccaccc
cctcctttgtatccacctcctccccatacacttcctctccctccaggtgttcctccacca
caattttctcctcagtttcctcctggccagccaccacctgctggatatagtgtccctcct
ccagggtttccgccagctccggccaatttatcgacaccttgggtatcatcaggagtgcag
acagctcattcaaataccatcccaacaacgcaagccccaccgttgtccagggaagaattc
tatagagagcaacgacggctgaaggaagaggaaaagaaaaagtccaagctagatgagttt
acaaatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgc
tcattttccaggtctaaatctccttatagtggttcatcatattcaagaagttcgtatact
tattctaagtcaagatctggttcaacacgttcacgttcttactctcgatcatttagccgc
tcacattctcgttcctattcccgatcacctccatacccccgaagaggcagaggcaagagc
cgaaattaccgttcacggtctagatctcatggatatcatcgatctaggtcaaggtcaccc
ccctatagacgataccattcacggtcaagatctcctcaagcatttaggggacagtctccc
aataaacgtaatgtgcctcaaggggaaacagaacgtgaatattttaatagatacagagaa
gttccgccaccttacgacatgaaagcttattacgggaggagtgttgactttagagaccca
tttgaaaaagagcgttaccgagaatgggaaagaaaatatagagagtggtatgaaaagtat
tataaaggttatgctgccggagcacagcctagaccatcagcaaatagagagaacttttct
cctgagagatttttgcctcttaatatcagaaattctcccttcacgagaggccgcagagaa
gattatgctggtggacaaagtcatagaagtcgaaacttaggtggcaactatccagaaaag
ctttcaacaagagatagtcacaatcagaaggacaacacaaagtcaaaagagaaggagagc
gaaaataatcccggagatggtaaaggaaacaaacataagaaacataggaaaagaagaaag
ggggaagagagtgaaggctttctaaaccccgagttattagaaacttctaggaaatcaaga
gaacctacaagcagtgaagaaaataaaacagactcattgtttgttctcccaagtagagat
gatgctacacctgttagagatgaaccaatggatgcagaatccatcactttcaagtcggtg
tctgaaaaagacaagagggagaaagataaaccaaaagcaaaaggtgacaagaccaaacgg
aaaaatgatgggtctactgtgtccaaaaaagaaaatgttgcaaaacctgctaagggaccc
caagaaaaactagacggagagcgtgaaaaatctcctcgatctgaacctccacttaaaaaa
gccaaagaggagactccaaagactgataatgctaaatcatcatcttcctcccaaaaagat
gaaaagaccattggtacccccagaaaagctcactctaaatcagcaaaagaacaccaagag
acaaaaccagtcaaagaggaaaaagtgaagaaggattaccccaaagacgtcaaatcagaa
aagctgactaataaggaagaaaaggccaagaagcctagtgagaaaagtaagccacctgat
agcaagggagaaaaaagaaaaagaaaaactgaagagaaaagtgtggagaaagattttgag
tcctcttcaacgaaagtctctaaactggaaatgactgaaatagtgaaaccatcaccaaag
cgcaaaatggaacctgatattgaaaaaatggataggacccctgagaaagacaaaatttca
tcatcaactgccccagccaaaaaaattaagctcaacagagaaactggtaaaaaaattggg
agtacagaaaatgtatctaatacgaaagaaccctctgaaaaattggagtcagcatctagc
aaagttaaacaagaaaaagtcaaaggaaaggtcagacgaaaagtagctggagctgaggga
tccagctcaactcttgtggattatacaagcacgagctcaactggaggcagtcctgtgcgg
aaatctgaagaaaaaacagatacaaaacggactgtcattaaaactatggaagagtataat
aatgacaatacagctcctgctgaagacgttattattatgattcaggttcctcagtccaaa
tgggataaagatgactttgaatctgaggaagaagatgttaaggccacacagcctatgtca
agtgtaggaaaacccgccagtgttataaaaaatgttagcactaaaccgttaaatacagtc
aagtatactgaaaaagaaagtgagtcgtcagagaaaattcagaaactcaccaaggaagtt
agccatgaaattatacagcatgagatcaagagttcaaaaaactctgcatccagtgaaaag
gggaaagccaaagatcgagatcattcggtgttggagaaggaaaaccccgaaaagaggaaa
aacagcactcagccagagaaagagagtaacttggaccgtctgagtgaaccaggaaatttt
aaaagtctgtctcaatcttccaaagagacaagaacttcagaaaagcatgattccgttcga
ggttcctcgactaaagacttcactcccaacagagacaaaaaaacagactatgacaacaga
gagtactcgagttccaaacgtagagacgaaaggaatgaattaacaagaaggaaagactcc
ccttctcgaagtaaagattctgcatctggacagaaaactaagccaagggaggagagagat
ttgcctaaaaaaggaacaggagattccaaaaagagcaattctagtccctccagagacaaa
aaacctcatgatcacaaagccacttatgatacgaaacgctcgactgaagagacaaaatct
gtagataaaaatccttgtaaagatcgtgagaagcacacgttagaagcaaggaacaataaa
gaatcgggtggcaacaaattactgtatgtgcttaacccaccagacccgcagattgaaaag
gagcaagttactgggcagactgacaagagcgctgtcaagcctaagccacagttaagccac
tcctcccgactttcctccgacttaactagggaaactgatgaagctgcttttgaaccagac
tataatgaaagtgacagtgaaagcaacatatctgtaaaagaggaggaaacttcgggaaag
attgctaaggaactgaaagataaagtcgtggagaaagcaaaagacagcctggacacggca
gcagccagccaggtaggcactgccaggagccagagtccaagcagccctagtgttagtcca
agcagaagtcatagcccttctggcagccggacccggagccacagcagtagtgccagctcc
gcagagagtcaggacagcaagaagaagaagaagaagaaggaaaagaagaagcacaagaaa
cacaaaaaacacaagaagcataagaagcatgcaggcactgaaggagagttggaaaaaagc
caaaaacacaaacacaagaaaaagaagtcaaagaagagcaaagataaagaaaaggagaag
gagaaagatgaccaaaaagcgaaatctgtccctgtataa
DBGET
integrated database retrieval system
