Lynx rufus (bobcat): 124517754
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Entry
124517754 CDS
T08475
Name
(RefSeq) E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04120
Ubiquitin mediated proteolysis
lruf04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124517754
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
124517754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124517754
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124517754
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124517754
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
124517754
NCBI-ProteinID:
XP_046943205
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDGADSPSEDSEKPRVLYSL
EFTFDADARVAITIYCQAVEEFLNGTAVYSPRSPALQSETVHYKRGVSQQFSLPSFKIDF
SEWKDDELNFDLDRGVFPVVIQAVVDEGDVVEVTGHAHVLLAAFEKHVDGSFSVKPLKQK
QIVDRVSYLLQEIYGIENKNNQETKPSDEENSDNSNECVVCLSDLRDTLILPCRHLCLCN
SCADTLRYQASNCPICRLPFRALLQIRAVRKKPGALSPVSFSPVLAQSMDHDEHSCPFKK
SKAHPASLASKKPKRETSSDSIPPGYEPISLLEALNGLRAISPAVPSAPLYEEITYSGVS
DGLSQAGCPLAGIDRILESSHQKGKPRSKSPDSTLRSPSSPIHEEDEEKLSQDSDAPPPL
SGAGLALSSSPESFVTEDVDEASALKQGSRVPSIENVLQDGSPEPCSRGQPRLPADIYLP
GWSTSVEMPRSLRTTGPPRPVLGGPSPDSGATELTPL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgggctccatcctgagccgccgcatcgcgggcgtggaggacatcgacatccaggcgaac
tcggcctatcgctaccccccgaagtccggaaactactttgcctctcactttttcatggga
ggtgagaaattcgacacccctcaccctgaaggttacctctttggagagaacatggatctg
aatttcctgggcaatcgcccggtccagtttccttacgtcacccccgccccccatgagccg
gtgaagacactgaggagcctggtgaacatccggaaagactctctccgactggtgaggtac
aaagatggtgccgacagcccctccgaggacagcgagaagccgcgcgtcctctacagcctg
gagttcacctttgatgccgacgcccgcgtggccatcaccatctactgccaggcggtggag
gagttcctgaacgggacggctgtgtacagccccaggagccctgccctgcagtccgagacc
gtccactacaagagaggggtgagccagcagttttccctgccctccttcaagatcgacttc
tccgagtggaaggatgatgagttgaactttgacctggaccggggcgtgtttccagtggtc
atccaggccgtggtagatgaaggagatgttgtggaggtgaccggccacgcccacgtgctc
ttggctgcctttgaaaagcacgtcgacggtagcttctctgtgaaacctttaaagcagaag
caaattgtggaccgggtcagctacctgctgcaggagatctatggcatcgagaacaagaac
aaccaggagacaaagccgtcggacgaggagaacagcgacaacagcaacgagtgtgtggtg
tgcctgtcggacctgcgggacacgctgatcctgccctgccggcacctgtgcctgtgcaac
tcgtgcgccgacacgctgcgctaccaggccagcaactgccccatctgccggctgcctttc
cgggccctcctgcagatccgggcggtgaggaagaagccaggagccctgtctccggtctcc
ttcagccctgttctggcccagagcatggaccacgatgagcattcctgtccctttaaaaaa
tcaaaggcgcaccccgcctcactggccagcaagaaacctaaaagggaaacaagctctgac
agcatcccacccggctatgagcccatctccctgcttgaggcgctcaacggccttcgggcc
atctccccggccgtcccttcagcccccctttacgaagagatcacctactcaggcgtctca
gatggcctgtcccaggccggttgtccccttgctgggatcgatcgaatcctggaaagcagc
caccagaagggcaagccgaggagcaaatcccccgacagcaccctgcggtctccgtcgtct
cccatccacgaggaggatgaggagaagctctcccaggactcggacgcccctcccccgctg
agtggggcggggctggcgctaagcagctcccccgagagctttgtgacggaggacgtggac
gaggcgtcggcactaaagcaagggagccgagtgccatccatcgagaacgtcctgcaggac
ggcagccctgagccctgcagccgcggccagccccgcctgccggccgatatctacctgcca
ggatggtccacctccgtggagatgccccgcagcctccgtaccactggcccaccccggcct
gtgcttggtggccccagtcctgattctggggccaccgagctgaccccactctga
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