Lynx rufus (bobcat): 124517923
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Entry
124517923 CDS
T08475
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124517923
03036 Chromosome and associated proteins [BR:
lruf03036
]
124517923
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
124517923
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Gene silencing
piRNA pathway
124517923
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
124517923
NCBI-ProteinID:
XP_046943607
LinkDB
All DBs
Position
Unknown
AA seq
1905 aa
AA seq
DB search
MRELEAKATKDVERNLSRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQKIKVPEQIK
PSVSQPQPANSNNGTSTATSTNNNAKRATANNPQQPQPPQQPPQPPQQPQQPQPQPQPPQ
ALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLSSQSESSALTNQQPQNNG
EVQNSKNQSDLNHNTSGSHYENSQRGPVSSPSDSSTNCKNAVVNDSPEKEVWPSVPGSDP
ELASECMDADSVSSSESERNITIMASGNTGGEKDGLRNSTGLGSQNKFVVGSSSNNVGHG
GSTGPWGFSHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLNPASNH
GAWPVLENNGLALKGPVGSGSSGINIQCSTIGQMPNNQSINSKVGGSATHGTWGSLQETC
ESEVSGTQKVSFSGQPQNITTEMTGPNNTTNFMTSSLPNPGSVQNNELPSNTGAWRVSTM
NPPQIQAPSVMNGTSLSHLSNGESKSGGSYGTTWGAYGSNYSGDKCSSPNGQANGDTVNA
TLMQPGMNGPVGTNFQVNANKGGGVWESGAAGSQSASWGSGNGASSGGSRRGWGAPAQNT
GTNLPGAEWSKLPSNQHSNDSANGNGKKFTNGWKSTEEEDQGAATSQTNEQNSVWAKTGG
TVESEGSTESTGRLEEKATGESQSRDRRKIDQHTLLQSIVNRTDLDPRVLSNSGWGQTPI
KQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSGACVDKTSPTSNDTSSVSGWGDPKP
ALRWGDSKGSNCQGGWEDDSAATGTVKSNQWGNCKEEKSTWNDSQKSKQGWGDGQKSNQG
WAVSASDNWGETSRSNHWGEANKKSSSGGSDSDRSVSGWNELGKTSSFTWGNNINPNNSS
GWDESSKPNPSQGWGDPPKSNQSLGWGDSSKPVGSPDWNKPQDLVGSWGIPPATGKPPGT
GWLGGPIPAPTKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNRNVPN
GSGRSDQQAQVQQLLPSASAISSKEAGGGSGWGEPWGEPSTPATTVDNGTSAWGKPIDSG
PSWGEPVAAASSTSTWGSSSVGPQALSKSGPKSMQDGWCGDDMPLPGNRPTGWEEEEDVE
IGMWNSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGTMKGGNKQEEAWINPFVKQF
SNISFSRDSPEENVQSNKMDLSGGMLQDKRMDIDKHSLNIGDYNRTVGKGPGSRPQISKE
SSMERSPYFDKNGNPSMFGVGNTAAQARGLQQPPAQPLSSSQPNLRAQVPPPLLSPQVPV
SLLKYAPNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRAQSQRSVPSGNR
QQQDQQGRPLSVQQQMMQQSRQLDPNLLVKQQTPPAQQQPLHQPAMKPFLENVMPHTTPE
LQKGPSPINAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKH
GAISSGFRLEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEP
WKGYPNIDPETDPYVTPGSVINNLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIR
ASNYNVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGL
TGQKPPLSTWDNSPLRVGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTL
RTLCMQHGPLITFHLNLPHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEIS
RFFAQSQSLTPSPGWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTSCGDLHGTS
LWGAPHYSTSLWGPPSSSDPRGMSSPSPINAFLSVDHLGGGGESM
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgagagaattggaagctaaagctaccaaagacgtagaaaggaatcttagcagggattta
gtgcaagaagaagaacagttgatggaagaaaagaaaaagaaaaaagacgacaagaaaaag
aaggaagctgctcaaaagaaggccactgaacaaaaaatcaaagtgccagaacagataaag
cccagtgtaagccagcctcagcctgccaactctaataacggcacttccacagcaaccagc
actaataataatgccaagcgagccacagccaacaatccgcagcagccgcagccgccgcag
cagccgccacagccgccacagcagccgcagcagccgcagccgcagccgcagccaccacag
gccttgcctcggtatcctcgggaagtaccaccacgatttcgccaccaggaacacaaacag
cttctaaagaggggtcagcattttcctgtcatagcagcaaacctgggatctgctgttaaa
gtgttaagcagccagtcagaaagcagtgctttaacaaatcaacagccacaaaataacgga
gaggtgcagaacagcaaaaaccagtcagatctaaaccacaatacttcaggatcccattat
gaaaattcgcagcggggacctgtgtcttctccgagtgactctagcacaaattgtaagaat
gctgttgtgaacgactcccctgagaaagaagtatggccctcagtccctggcagtgatcca
gagttggcttcagaatgtatggatgctgattctgtctccagttctgaatcagagagaaac
atcactatcatggcttcagggaacacaggtggtgaaaaagatggccttcggaatagcact
ggacttggttcccaaaacaagtttgtggttggtagcagcagcaataatgtgggccatgga
ggtagtactgggccgtggggtttttcccatggagccataataagcacatgtcaggtctct
gtggatgctcctgaaagcaaatcagaaagtagcaacaatagaatgaatgcttggggcact
gtaagttcttcatcaaatggagggttaaatccaagcactttgaatccagctagcaaccat
ggtgcctggccagtattagaaaacaacggacttgccctaaaagggcctgtagggagcggt
agttccggcatcaatattcagtgcagtaccataggccagatgcctaacaatcagagtatt
aactctaaagtgggtggttctgccacccatggtacctggggaagccttcaggaaacttgt
gaatctgaagtaagtggtacacagaaggtttcattcagtggtcaacctcagaatattacc
actgaaatgactggaccaaataacactactaactttatgacctctagtttaccaaacccc
ggttcagtacagaataacgaactgcctagtaatacaggggcctggcgtgtgagcacaatg
aatcctcctcagatacaggctccgtcagttatgaatggcacttccctttctcaccttagc
aatggagagtcaaaaagtggaggctcttacggtactacgtggggtgcctatggttctaat
tactctggagacaaatgttcgagccctaacggccaagctaatggtgacactgtgaatgca
actctaatgcagcctggcatgaatgggcctgtgggcactaactttcaagttaacgcaaat
aaaggaggaggcgtgtgggagtccggggcagcgggttcccagagtgcgtcatggggaagc
gggaatggcgccagttctggaggaagtcgaagagggtggggagctcccgcacaaaacact
ggcactaatctacccggcgcggagtggagcaaactgcctagcaatcagcattccaatgac
agtgcaaacggcaatggtaagaagtttacaaacggatggaaatctactgaggaagaggat
cagggtgctgccacatcccagacaaacgagcagaacagcgtgtgggccaaaacaggagga
acagtggagagcgaaggtagtacagaaagcactggacgcctcgaggaaaaagcaactggg
gaaagtcagagtagagacaggaggaaaattgatcagcacacattactccaaagcatcgtg
aacaggactgacttggatccacgtgtcctctccaactctggttggggacagactccgatt
aagcagaatactgcctgggacaccgaaacttcacctagaggggaaagaaagactgacaat
gggacagaggcctggggaagctctgccacacagacttttaactcaggggcgtgtgtagat
aagactagccctactagtaacgatacctcatctgtatcggggtggggagatcccaaacct
gctctgcggtggggagattccaaaggctcgaactgccaggggggatgggaagatgattct
gctgctacaggaacggtcaagagcaatcagtgggggaactgcaaagaagagaagtccacg
tggaatgattcgcaaaagagcaaacagggatggggtgacgggcaaaaatcaaaccaaggg
tgggccgtgtccgccagcgataactggggagaaacttcgaggagtaaccattggggtgag
gctaataagaaatctagctcaggaggtagtgacagtgaccggtccgtttccggttggaac
gaacttggtaaaactagttcttttacttggggaaataacataaatccaaataattcatca
ggatgggatgaatcttctaaacctaatccttcccagggatggggagatcctccaaagtct
aatcagtctctaggttggggagattcgtcgaagccagtcggttctccagactggaacaag
ccacaagaccttgtcggatcctgggggatcccgccagctacaggcaaacctcccggtaca
ggctggctgggaggacctataccagccccgacaaaggaagaagagcccacaggctgggag
gaaccatccccggaatccatacgtcgcaaaatggagattgatgacggaacttcggcttgg
ggagacccaagcaagtacaactacaaaaatgtgaacatgtggaacagaaacgtcccgaac
ggcagcggccgttcagaccagcaagcacaggtccagcagctgctcccgtctgcaagtgcc
atctccagcaaagaggcgggcggcggctccggctggggtgagccctggggggagccttct
actccagccacaactgtggataatggtacttcagcatggggtaaacccatagacagtggt
cccagctggggggagcccgttgctgcggcatccagcacgtccacgtggggctccagctct
gttggtcctcaagcgttaagcaaatctgggccaaaatctatgcaagatggctggtgtggt
gatgatatgccattgcctggaaatcgccccactggctgggaagaggaagaggatgtagag
attggaatgtggaatagtaattcatctcaagagcttaactcatctttaaattggccacca
tatacaaagaaaatgtcatcgaagggtctgagtggcaaaaaaaggagaagggaaagggga
accatgaaaggtggaaacaaacaagaagaagcgtggataaatccattcgttaaacagttt
tcaaatatcagtttttcgagagactcaccagaagaaaacgtacagagcaataagatggac
ctttctggaggaatgttacaagacaaacgaatggacatagataaacatagcctaaatatt
ggtgattacaatcgaacggtcgggaaaggccctggttctcggcctcagatttccaaagag
tcttccatggagcgcagtccttattttgataagaatggcaatcccagtatgttcggtgtt
ggaaacacagcagcacaagcccggggcctgcagcagcctccagcacaacctcttagttca
tctcagcctaatctccgtgctcaagtgcctcctccattactctcccctcaggttccagtt
tcattgctgaagtatgcaccaaacaacggtggcctgaatccgctctttggccctcaacag
gtagccatgctgaaccagctatcccaactaaaccagctttctcagatctcccagttacag
cgattgttagcgcagcagcaaagggcgcagagtcagagaagcgtgccttctgggaaccgg
cagcagcaagaccagcagggtcgacctcttagtgtgcagcagcaaatgatgcagcagtct
cgccagctggaccccaacctgttggtgaagcaacagaccccgccagctcagcagcagcca
ctccatcagccagccatgaaacctttcctcgagaacgtcatgccccacactacacccgag
ctgcagaaagggccgtcaccaataaatgctttcagcaacttccctataggcttgaactca
aacttgaatgtaaatatggatatgaacagtattaaagagccacagtcaagactaaggaag
tggactacagtggacagcatttctgtgaacacatctttggatcaaaactccagcaaacat
ggtgctatttcaagtggtttcaggctggaagagtctccgtttgttccctatgactttatg
aacagcagtacttctccagccagtcctccaggttcaataggagacggctggccacgtgcc
aaatcgcctaacggctctagcagtgttaattggccaccagaatttcgccctggtgaacca
tggaaaggttatccaaacatcgaccctgaaactgacccttacgtcactcctggcagtgtc
ataaacaatctttcaattaatactgtgcgggaagttgaccacctcagggacaggaacagt
gggtcatcctcatccttgaacaccacgctgccttcaactagtgcctggtcatccattcgt
gcctccaactacaacgttcccctcagcagtacagcacaaagcacttcagccagaaatagt
gattccaaattgacatggtctcctggttcagttacaaacacctctctggctcatgagctg
tggaaggtccctttaccacctaaaaacatcactgctccgtcccgcccacctccgggactg
actggtcagaagccacccttgtctacgtgggataactctccccttcgtgtaggtggagga
tggggaaattctgacgccaggtataccccaggttccagctggggtgagagcagctcaggg
agaataacaaattggcttgttctaaagaaccttacacctcagatcgatggctcaactctg
cgtactctgtgcatgcagcacggcccactgataacattccacctgaacctcccacatgga
aatgctctggtccgttacagctcaaaagaagaggtagtgaaggcacagaagtctctgcac
atgtgtgtattggggaacactactattcttgctgagtttgccagtgaagaggagatcagc
cgtttctttgcacaaagtcagtctctgaccccttctcccggctggcagtctctcgggtcc
agccagagccggctgggctccctcgactgttcgcactcgttctccagccggaccgatctc
aatcactggaatggtgctgggctgtcgggaacgagctgtggagaccttcacggcacttca
ctctggggggccccccattattccacaagcctgtgggggcctcccagcagcagcgacccc
cggggaatgagcagcccgtcccccattaatgcttttctttctgttgaccacctgggtggg
ggtggagagtccatgtag
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integrated database retrieval system
