Lynx rufus (bobcat): 124518134
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Entry
124518134 CDS
T08475
Name
(RefSeq) GATOR complex protein DEPDC5-like
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
124518134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124518134
Membrane trafficking [BR:
lruf04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
124518134
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
IML1
IML1_N
DEP
Motif
Other DBs
NCBI-GeneID:
124518134
NCBI-ProteinID:
XP_046943871
LinkDB
All DBs
Position
Unknown
AA seq
1571 aa
AA seq
DB search
MRTTKVYKLVIHKKGFGGSDDELVMNPKVFPHIKLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVTQVFRLRPYQDVYVNVVDPKDVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVEFAGIRAQAGELWVKNEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSLDEFPEINRA
SIRQDHKGRYYEDFYKVVVQNERREEWTSLLVTIKKLFIQYPVLVRLEQAEGFPQGDNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSAPRDSRLGDDYNIPHWINHSFYTSKSQLFCNSFT
PRIKLAGKKPASEKAKNGRDTSLGTPKESENALPIQVDYDAYDAQVFRLPGPSRAQRLAT
CRSVRERESHNRKSASSCDVSSSPSLPSRTLPTEEVRSQASDDSSLGRSANILMIPHPHL
HQYEVSSSLGYTSTRDVLENMMEPPQRDSSAPGRFHVGSAESMLHVRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGSGQRDPSHSSAELLE
LAYHEAAGRHSTSRQPGDSMSFLNFSGTEELSVSLLSNSGAGMNPRTQNKDSLEDSVSTS
PDPMPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPEADIDRRDEE
GVQMTAQQVFEEFICQRLMQGYQIIVQPKAQKPNPAVPPPLSSSPLYSRGLVSRNRPEEE
DQYWLSMGRTFHKVTLKDKMITVTRYLPKYPYESAQIHYTYSLCPSHSDSEFVSCWVEFS
HERLEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVTATKRITEGEAHCDIY
GDRPRADEEEWQLLDGFIRFVEGLNRIRRRHRSDRMMRKGTAMKGLQMTGPIATHSLEST
GPPVGKKGTSALSALLEMEASQKCMGEQQAAVHSGKSSSQPAESSSVAMTPTYVDSPRKV
SVDQTATPVLDSTSLGVSTGQSVDRGSSQAFGNSQNSGEQSFLSANSSDSSSQQLAASSL
TSSSTLTEILEAMKHPSTGVQLLSEQKGLSPCCFISAEVVHWLVNNVEGVQTQAMAIDIM
QKMLEEQLITHASGEVWRTFIYGFYFYKIVMDKEPDRVAMQQPTTWHTTAVDDFASFQRK
WFEVAFVAEELLHSEIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQAAALLAATVPEQR
TVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMAVTAAVLFEMVQGWHRKATSC
GFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNISCLLKEGSEHLFDSFEPETYWDRMHLF
QEAIAHRFGFVQDKYSASAFNFPAENKPQYIHVTGTVFLQLPYSRRKFSGQQRRRRNSTS
STNQNMFCEERVGYNWAYNTMLTKTWRSSATGDEKFADRLLRDFTDFCINRDNRLVTFWT
SCLEKMHASAP
NT seq
4716 nt
NT seq
+upstream
nt +downstream
nt
atgagaacaacaaaggtctacaaactcgtcatccacaagaagggctttgggggcagtgat
gatgagctagtcatgaaccccaaagtgtttcctcacatcaagcttggagacattgtggaa
attgctcaccccaatgatgaatacagccctctgcttttgcaggtcaaatcacttaaggaa
gatttacagaaagaaactattagcgtggaccagaccgtgactcaagtgttccgtctaaga
ccttatcaagatgtttatgtgaatgttgtagaccctaaggatgtgacccttgacctagtg
gaattaacctttaaggatcaatatattggccgaggggacatgtggcgattaaagaaaagt
ttggtcagcacatgtgcctatatcactcagaaggtggaatttgctggcatcagggcacag
gctggtgagctgtgggtcaagaatgaaaaggtcatgtgtggttatatcagcgaagatacc
agggtggtgttccgttctacgtcggctatggtttacatatttattcagatgagctgtgaa
atgtgggatttcgatatttatggggatctatattttgagaaagctgtgaatggtttcctt
gctgatctctttaccaagtggaaggagaagaactgtagtcatgaagtgacagtggtccta
ttttctagaactttctatgatgcaaaatctcttgatgaatttcctgaaataaaccgagcc
tcaattcgacaggatcacaagggacggtactatgaagacttttataaagtggtggtgcag
aatgagaggagagaagagtggacatcactccttgtgaccattaaaaaactctttatccag
tatccagtgttggtgcgactggaacaggcagagggctttcctcaaggagataattctacc
tcagcacaaggaaactacctagaggccatcaatctgtcattcaatgtgtttgacaagcac
tacatcaaccgcaactttgaccgaactgggcagatgtctgtggtgatcacacctggggtg
ggtgtgtttgaagtggaccgtctactcatgatcttgaccaagcagcgaatgatagataat
ggaattggtgtggacttggtgtgcatgggggagcaaccattacatgctgtcccattgttc
aagctacataatcgaagtgcacctcgtgattctcggctgggcgatgactataatattcct
cactggataaaccacagtttctatacgtctaaaagccagctcttttgtaacagtttcacc
ccgcgaataaaactggcaggaaagaagcctgcctctgagaaagcaaaaaatggccgtgat
acatctcttgggactccaaaagaatctgagaacgcccttcccatccaagtagattatgat
gcctacgacgcccaagtgttcaggctgccaggcccatcccgggctcagcgcctcgctacc
tgcagatctgtgcgagagcgggagagtcataatcgaaagagtgccagctcctgtgatgtc
tcatccagcccttccctgcccagccgcacactgcccactgaggaagtgcggagccaggct
tctgatgacagctccctgggcaggagtgccaacatcctgatgatcccgcacccccacctg
caccagtatgaagtcagcagttccttgggctacaccagcactcgagatgtcctggagaac
atgatggagccaccacagcgagactctagtgcgccgggaaggttccatgtaggcagtgca
gaatccatgctgcatgttcgacctgggggatacacgccccagcgggcactgattaacccc
tttgccccctcacgaatgcccatgaagctcacatccaacagaaggcgctggatgcacact
tttcctgtgggaccatccggagaggccatccagatccatcaccagacccgacagaatatg
gcggagctgcagggcagcgggcagagggacccatctcactcctctgcagagctgctggag
ttagcgtatcatgaagctgctggaaggcacagcacttcccgccagcctggtgacagcatg
tccttcttgaacttcagtggaacagaagagctttctgtcagcctgcttagcaacagtggt
gcaggtatgaatcctaggacccaaaacaaggattctctagaggacagtgtttctacctct
ccagatccaatgccaggcttctgttgcacagttggagtggactggaagtctctcactact
ccggcgtgtctccccctcaccaccgactacttccctgaccgccagggcctgcagaacgac
tacacggagggctgttatgatctcctcccagaagcagacatcgacaggagggatgaggaa
ggtgtgcagatgacggcccagcaggtgtttgaagagttcatctgccagcgtctcatgcag
ggctaccaaatcatagtgcagcccaaggcacagaaacccaaccctgctgtcccacccccg
ctgagcagcagcccactctatagccgaggccttgtatcccgaaaccgccctgaggaggag
gaccagtactggctgagtatgggcagaacgttccacaaagtgacgctgaaggataagatg
atcacagtgacacgttaccttcccaagtacccgtatgaatccgcccagatccactacacc
tacagcctctgtccctcccactcggactcagagttcgtctcctgttgggtggaattctcc
catgagcggctggaggagtacaagtggaattacttagatcaatatatctgttctgctggg
tctgaggacttcagcttaattgagtctctgaagttctggaggacccgcttcctgctgctg
ccagcctgtgtcactgccaccaagcgcatcacagagggggaagcccactgcgacatctat
ggggacaggccccgggcggatgaagaagagtggcagctcctggatggttttatccgcttc
gtggagggtttgaaccggatccgcaggcggcatcgctcagatcgcatgatgcggaaaggg
accgccatgaaaggcttacagatgaccgggcccattgccacacactcccttgagtctacc
ggccccccagttggcaagaagggaacatcagctctgtccgccctgttggagatggaggcc
agtcagaagtgcatgggagaacagcaggcagctgtgcacagtggcaagagctcctcccag
ccagcggagagcagcagcgttgccatgactcccacctacgtggacagcccacgaaaggta
tctgtggaccagacagccaccccggtgttggacagcaccagtctgggggtaagcacaggc
cagtctgtggacagaggcagcagccaagcctttgggaactcccagaattcaggggaacag
agcttcctctctgcaaactccagtgacagcagctctcagcagttggcagcaagctcctta
acctcatcctccaccctgacggagatcctagaagccatgaagcacccctcgacaggagtc
cagctgctctcggaacagaagggcctctcgccatgctgcttcatcagtgcggaggtggtg
cactggctggtgaacaatgtggagggtgtccagacgcaggcaatggccatcgacatcatg
cagaaaatgctggaagagcagctcatcacacacgcatctggtgaagtctggcggaccttc
atctacggcttctatttctacaagatagtcatggacaaagaacctgaccgagtggccatg
cagcagcccactacctggcacacgacagcagtggatgacttcgccagcttccagcgcaag
tggtttgaggtggcctttgtagctgaagaactcttacactccgagattcctgctttcctc
ttgccctggctgcccagccggccagcctcctatgcaagcagacacagctctttcagccga
agctttggggggcggagccaggcagctgcacttttagctgccactgtcccggagcagagg
actgtgaccctggatgtggatgtgaacaaccgcacagaccggttagagtggtgcagctgt
tactatcatggcaacttctccctgaatgcggccttcgagatcaagctccactggatggca
gtgaccgctgccgtcctcttcgagatggtccaaggctggcaccgaaaagctacttcctgc
ggctttctgttggtccccgttttggagggtccctttgcgctgcccagttacctgtatggt
gatccacttcgagctcagctcttcatcccactcaacatcagctgcctgctcaaggagggc
agtgagcatctgttcgatagctttgaaccggaaacatactgggatcgaatgcaccttttc
caggaagccattgcacacaggtttgggtttgtacaagataaatattctgcttctgctttt
aacttccctgccgagaacaagcctcagtacatccatgttacaggaacagtgttcctgcag
ctgccctactccaggcgaaagttctcggggcaacagcgacgtcggcgaaactccaccagc
tccactaaccagaacatgttctgtgaggagcgggttggctacaactgggcctacaacacc
atgctgaccaagacgtggcgatctagtgccacaggggatgagaagtttgctgatcggctg
ctcagggatttcacggacttctgcatcaaccgcgacaaccggctggtcacgttctggacg
agctgcctggagaagatgcatgctagcgccccgtga
DBGET
integrated database retrieval system
