Lynx rufus (bobcat): 124518161
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Entry
124518161 CDS
T08475
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124518161
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124518161
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124518161
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
HECT type E3
124518161
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
124518161
NCBI-ProteinID:
XP_046943927
LinkDB
All DBs
Position
Unknown
AA seq
1068 aa
AA seq
DB search
MFTVSQTSRAWFIDRARQAREERLVQKERERAAVEIQAHVRSFLCRRRLQREIRREIDEF
FKADDVESSKRSALCIFKIARKLLFLFRIKEDNERFEKLCRCILSSMDAENEPKVWYVSL
ALSKDLTLLWIKQIKHILWCCCEFLEQLKPEILQDSRLITLYLTMLVTFTDTSTWKILRG
KGENLRPAMNHICANIMGHLNQHGFYPVLQMLLTRGLARPRPCLSKSTLTATFSLALRPV
IAAQFSDSLLRPFLIHIMSVPALVTHLSTVTPERLTVLESHDMLRKFIAFLRNEDRCRDV
CESLEGCHTLCLMGNLLQLGSLSPKVLEEETDGFVSLLTQMLCYCQKYVSQKKSNLTHWH
PVLGWFSQSVDYGLNESMPLITKQLQFLWGVPLIRIFFSDILNKKLLENQEPAHAQPASP
QNVLPVKNLLKRAFQKSASVRNILRPVGGKRVDSAEVQKVCNICVLYQTSLTTLTQIRLQ
ILTGLTYLDDLLPKLWAFICELGPHGGLKLFSECLNNDTEESKQLLAMLTLFCDCSRHLV
TILDDIEVYEEQISFKLEELVTISSFLNSFVFKMIWDGIVENAKGDTLELFHSVHGWLMV
LYERDCRRRFAPEDHWLRKDLKPSVLFQELDKDRRRAQLILQYVPHVVPHKNRVLLFRNM
VTKEKEKLGLVETSSASPHVTHITIRRSRMLEDGYEQLRQLSQHAMKGVIRVKFVNDLGV
DEAGIDQDGVFKEFLEEIIKRVFDPALNLFKTTSGDERLYPSPTSYIHENYLQLFEFVGK
MLGKAVYEGIVVDVPFASFFLSQLLGHHHSVFYSSVDELPSLDSEFYKNLTSIKRYEGDI
ADLGLTLSYDEDVMGQLVCHELTPGGKTTPVTNANKISYIHLMAHFRMHTQIKNQTAALI
SGFRSIIKPEWIRMFSTPELQRLISGDNAEIDLEDLKKHTVYYGGFHGSHRVIIWLWDIL
ASDFTPDERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFT
IRKREPGGRLPTSSTCFNLLKLPNYSRKSVLREKLRYAVSMNTGFELS
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgttcaccgtttctcagacctcgagagcgtggttcatcgatagagcccgtcaggctcgg
gaggaaaggctggtgcagaaggagcgggagcgggcggccgtcgagatccaggcccatgtt
cgcagtttcctgtgtcggaggcgactgcagagagagatccggagagagatcgatgagttt
tttaaagccgatgacgtggagtccagtaaaagaagcgcactttgtatttttaagattgcc
aggaaactgctgttcttgttcagaattaaagaggataatgagagatttgagaagttgtgt
cgctgcatcctgagcagcatggatgctgagaacgaacccaaggtgtggtatgtgtccttg
gctctttccaaggatctcaccctcctgtggattaaacagatcaaacacattctttggtgt
tgctgtgagtttcttgagcagctcaagcctgaaatcttacaggactccagactcatcacg
ctgtacctcacaatgcttgtcaccttcacagacacttcaacatggaaaatcctccgcgga
aaaggggagaatcttcggccagccatgaaccacatctgtgcgaatataatgggacatctc
aaccagcatggattctatcctgtgctgcagatgctgttaacccgtggcctggcaagaccc
cggccttgtctgtccaaaagcactttaactgcgaccttttctctcgcactgcgccctgtg
attgctgcacaattttcagacagtctgcttcggccattcctcatccacatcatgtctgtg
cctgctctcgtgactcacctcagcacagtgacccctgagcgcctcactgttttagaatct
catgacatgcttcgtaaattcatcgcatttttaagaaacgaagatcgatgccgtgacgta
tgtgaaagcttagaaggatgccatacgctttgtctaatgggcaaccttctgcagttgggc
tccctcagccccaaggtgttagaggaagagacggatgggttcgtgagtttgctcacccag
atgctgtgctactgtcagaagtacgtgtcccagaagaaatccaacctgacgcactggcac
cccgtcctcggctggttctcccaatctgtggactatggccttaacgagtccatgcccttg
atcaccaaacagctgcagttcctgtggggggtgcctctgatccggatcttcttcagtgac
atcctgaacaagaagcttctggagaaccaggagccagcccacgcgcagccggcatccccc
cagaacgtgcttcccgtgaagaacctcctgaagcgcgcgtttcagaagtccgcatcagtt
cggaatattctcaggcctgttgggggtaagcgtgtggactctgcggaggtccagaaggtc
tgcaacatctgcgtcctctaccagacctcgctgacgactctgacccagatccggctgcag
atactcacaggactcacttaccttgatgacctgctccccaaactgtgggcgtttatctgt
gagctggggccccacggagggttaaagctcttctcggagtgcctcaacaatgacaccgaa
gagtccaagcagctcttggccatgctgacgctgttctgtgactgctcccggcacctcgtc
acgatccttgacgacatcgaagtttacgaagaacaaatttcattcaaactggaagagctg
gtcaccatctcctctttcctgaactcctttgtgtttaagatgatctgggatgggatcgta
gagaacgccaagggggacaccttggagctgttccattctgtccacggctggctgatggtg
ctgtacgagagggactgccggcggcgctttgcccccgaggaccactggctgcgaaaggac
ctcaaacctagcgtgctcttccaagaactggacaaggacagaagacgggcgcagctgatc
ctgcagtacgtccctcatgtcgttccccacaaaaacagagttctcctgttccgaaacatg
gttaccaaggagaaggagaaactggggctcgtggaaaccagctcagcctctccccacgtc
acccacatcacaatccgacggtctcgcatgttggaggatggctacgagcagctccggcag
ctgtcccagcacgccatgaagggcgtgatccgtgtgaagttcgtcaatgacctcggggtg
gacgaggccggcattgaccaggatggtgttttcaaggagttcctggaggaaatcatcaag
agggtgttcgacccggcactcaatctgttcaagacaaccagcggggacgagaggctgtac
ccttcacccacgtcctacattcatgagaactatctacagctcttcgagtttgtgggcaag
atgctggggaaggctgtgtatgagggaattgtggtggacgtgcccttcgcctccttcttc
ctgagccagctgctcgggcaccaccacagtgtcttctatagctccgtggacgagcttcct
tcactggactcagagttctacaaaaacctcacttctattaagcgttacgaaggggacatc
gctgacctgggcctgactctgtcgtacgatgaggacgtcatgggtcagctcgtttgccat
gaactgactcctggagggaagaccacgccagttacgaatgcaaataagattagctacatc
catctgatggcccactttcgaatgcacactcagatcaaaaaccagacagctgccctcatt
agcgggttccgttccattatcaagcccgagtggatccggatgttctcgacccccgagcta
cagcgtctcatctccggtgacaatgctgagattgacctggaagatttaaagaagcacacg
gtgtactacggtgggtttcacggaagtcacagggtcatcatctggctctgggatattctg
gcctctgacttcacacctgacgagagagccatgtttctgaagtttgtgaccagctgctcc
aggcccccgctcctgggattcgcctacctcaagcctcctttttccatccgctgtgttgaa
gtgtcagacgatcaggacaccggggacaccctcggcagtgtcctccggggcttcttcacc
atccgcaagcgggagccaggcggccgcctgcccacatcctccacctgcttcaacctgctc
aagctgcccaactacagcaggaagagcgtgctccgcgagaagctgcgctatgccgtcagc
atgaacacgggcttcgagctttcctag
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integrated database retrieval system
