KEGG   Lynx rufus (bobcat): 124518204
Entry
124518204         CDS       T08475                                 
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03030  DNA replication
lruf03410  Base excision repair
lruf03420  Nucleotide excision repair
lruf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124518204
   03410 Base excision repair
    124518204
   03420 Nucleotide excision repair
    124518204
   03430 Mismatch repair
    124518204
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lruf03032]
    124518204
   03036 Chromosome and associated proteins [BR:lruf03036]
    124518204
   03400 DNA repair and recombination proteins [BR:lruf03400]
    124518204
DNA replication proteins [BR:lruf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124518204
  DNA Replication Termination Factors
   ELG1-RFC complex
    124518204
Chromosome and associated proteins [BR:lruf03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    124518204
DNA repair and recombination proteins [BR:lruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124518204
  Check point factors
   HRAD17(Rad24)-RFC complex
    124518204
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_24 AAA_16 AAA_11 AAA_22 AAA_assoc_2 RuvB_N AAA_14 DEAD DUF815 ResIII AAA_5 ATPase_2 AAA_19 AAA_30 PhoH nSTAND3 TIP49 AAA_7 TniB DNAX_ATPase_lid AraA_central Mg_chelatase Thioredoxin_6 bpMoxR NPHP3_N AAA_25 AAA_3 ABC_tran AAA_28
Other DBs
NCBI-GeneID: 124518204
NCBI-ProteinID: XP_046944006
LinkDB
Position
Unknown
AA seq 340 aa
METSAKKEQQQPAEAKIRNLPWVEKYRPQTLNDLISHQDILSTIQKFISEDRLPHLLLYG
PPGTGKTSTILACAKQLYKDKEFGSMVLELNASDDRGIDIVRGPILSFASTRTIFKKGFK
LVILDEADAMTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPE
LMVPRLEHVVEEEKVDISEDGMKALVTLSSGDMRRALNILQSTNMAFGKVTEETVYTCTG
HPLKSDIANILDWMLNQDFTTAYRNITELKTLKGLALQDILTEIHLFVHRVDFPSSVRVH
LLTKMADIEYRLSVGTNEKIQLSSLIAAFQVTRDLIVTEA
NT seq 1023 nt   +upstreamnt  +downstreamnt
atggagacctcagcgaagaaggagcagcagcagcccgcggaggccaagatcagaaacctg
ccctgggttgaaaaataccggccacagacactgaatgatctgatttctcatcaggacatt
ttgagtaccattcagaaatttattagcgaagaccgactgccgcacctgcttctctatggt
cctccagggacaggaaagacctctaccatcctagcctgtgctaaacagctatacaaagat
aaggaatttggctccatggtcttggagctgaatgcttcagacgaccgaggaatagatatc
gttcggggaccaatcctgagctttgccagcacaaggacaatatttaagaaaggcttcaaa
ctagtgatcttggatgaagctgacgccatgactcaagatgcccagaacgccttgaggaga
gtgattgagaaatttaccgaaaatacccgcttttgcctcatctgtaactatctgtcaaag
atcatccccgccttgcagtcccgctgtacgaggttccgattcggtcctctgactcctgaa
ctcatggttccccgcctggaacatgttgtagaagaagagaaggtggacataagtgaggac
gggatgaaagcacttgtgactctttccagcggagatatgcgaagggctctgaacattctg
cagagcaccaatatggcctttgggaaggtgacagaggagaccgtctacacctgtactggg
cacccactcaagtcagacatcgccaacattctggactggatgttgaatcaagacttcacg
acagcctacagaaatattacagagttgaaaacactgaaggggttggcgttacaggacatc
ctgacagagatacacttgtttgtgcacagagttgactttccatcttcagttcgagtacat
ttattgaccaaaatggcagacattgagtacagactttctgttggcaccaacgagaagatt
cagctgagttccctcatagccgctttccaggtcaccagggacctgatcgtcacagaggcc
taa

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