KEGG   Lynx rufus (bobcat): 124518328
Entry
124518328         CDS       T08475                                 
Name
(RefSeq) THO complex subunit 5 homolog
  KO
K13174  THO complex subunit 5
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03013  Nucleocytoplasmic transport
lruf03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    124518328
  09122 Translation
   03013 Nucleocytoplasmic transport
    124518328
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lruf03019]
    124518328
   03041 Spliceosome [BR:lruf03041]
    124518328
Messenger RNA biogenesis [BR:lruf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     124518328
Spliceosome [BR:lruf03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    124518328
SSDB
Motif
Pfam: FmiP_Thoc5
Other DBs
NCBI-GeneID: 124518328
NCBI-ProteinID: XP_046944252
LinkDB
Position
Unknown
AA seq 683 aa
MSSESSKKRKPKVIRSDGAPSEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAVEIEDRRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
HLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
QFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLSASHMETTMKLLK
TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHEDYMELHFTKDIV
EAGLAEDTNLYYMALVERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGEKTNSNDDNIRA
MESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
LFRGPSRMKPFKYNHPQGFFSHR
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgtcatcagaatcaagcaagaaacggaagcccaaagtgatccgaagtgatggagctcca
tctgaaggcaagcgtaaccgttctgacacagaacaggaaggtaaatactacagcgaggag
gctgaggtggacctgcgggaccctggcagagactatgagctgtacaagtacacgtgccag
gagttgcagaggctcatggctgagatccaggacctgaagagccgaggaggcaaggatgtg
gcagttgagatagaagatcggaggatccagagctgtgtgcatttcatgactctaaagaag
cttaatcgattagcccatatcaggttgaagaaaggaagagatcagacccatgaggccaag
cagaaagtagatgcctatcacctgcagctccagaacctgttgtatgaggtgatgcacctg
cagaaagagatcaccaaatgtctggagtttaagtcgaagcatgaagaaattgatctggtc
agtttagaggagttttataaggaggctcctccagatattagcaaggctgaagtcaccatg
ggagaccctcaccagcaaaccctggcacgtctggactgggagctggagcagcgaaaaagg
ctggcagagaagtaccgagagtgcctgtccaacaaggagaagatcctcaaggagattgag
gtgaagaaggaatacctgagcagcctccagcctcgtctcaatagcattatgcaggcttcc
ctcccagtgcaagagtacctattcatgccgttcgaccaggctcacaagcagtacgagaca
gctagacatctgccaccgcctctctatgtcctctttgtccaggccactgcgtatgggcag
gcctgtgataagacgttgtctgtggcgatcgaaggcagtgtggatgaagccaaggctcta
tttaagcctcctgaagactcccaagatgatgagagcgactccgatgctgaagaggagcag
accacgaaacgccggcgacccacactgggagttcagttggatgacaagcgcaaggagatg
ctgaaaaggcacccgctatctgtcatgctggacctgaagtgcaaagatgacagtgtgctt
cacctgaccttctactacctcatgaacctcaacatcatgacggtaaaggccaaagtgaca
accgccacggagctgatcacccccatcagtgcaggtgacttgctgtctcctgactcagtc
ctgagctgtttgtatccaggggatcatggaaagaagactccgaatccagccaatcagtat
cagtttgataaagttggcatcctgactttgagagactacgtacttgacctaggtcacccc
tatttgtgggtacagaagctaggtggcctccacttccccaaagagcagccccagcacacg
gtgattgctgaccactcgctgagcgccagccacatggagaccaccatgaaactgctgaag
accagggttcaatcccgcctggccctccacaaacagtttgcatccctggaacatggcatt
gtaccagttaccagtgattgccagtacctctttcctgcaaaggttgtctcccgcctggtc
aagtgggtgacaattgcccatgaggattacatggagctgcatttcaccaaggacattgtg
gaggcaggactggctgaggacaccaatctttactacatggcactcgtggaaaggggcaca
gccaaactccaagctgctgtggtgctgaaccctggctactcctccatcccacccattttc
cagctgtgtctgaactggaaaggagagaaaaccaatagcaacgatgacaacattcgggcc
atggagagcgaggtcaacgtgtgctacaaggagctctgtggcccccgacccagccatcag
ctcttgaccaaccagctgcagcgcctatgtgtgctgctggatgtctacctggagacggag
agccacgacgacagcgtggaggggcccaaggaatttccccaggagaagatgtgtctgcgg
cttttcaggggtcccagcaggatgaagccatttaaatataaccaccctcaaggattcttc
agccatcgctga

DBGET integrated database retrieval system