Lynx rufus (bobcat): 124518328
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Entry
124518328 CDS
T08475
Name
(RefSeq) THO complex subunit 5 homolog
KO
K13174
THO complex subunit 5
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03013
Nucleocytoplasmic transport
lruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124518328
09122 Translation
03013 Nucleocytoplasmic transport
124518328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124518328
03041 Spliceosome [BR:
lruf03041
]
124518328
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
124518328
Spliceosome [BR:
lruf03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
124518328
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
124518328
NCBI-ProteinID:
XP_046944252
LinkDB
All DBs
Position
Unknown
AA seq
683 aa
AA seq
DB search
MSSESSKKRKPKVIRSDGAPSEGKRNRSDTEQEGKYYSEEAEVDLRDPGRDYELYKYTCQ
ELQRLMAEIQDLKSRGGKDVAVEIEDRRIQSCVHFMTLKKLNRLAHIRLKKGRDQTHEAK
QKVDAYHLQLQNLLYEVMHLQKEITKCLEFKSKHEEIDLVSLEEFYKEAPPDISKAEVTM
GDPHQQTLARLDWELEQRKRLAEKYRECLSNKEKILKEIEVKKEYLSSLQPRLNSIMQAS
LPVQEYLFMPFDQAHKQYETARHLPPPLYVLFVQATAYGQACDKTLSVAIEGSVDEAKAL
FKPPEDSQDDESDSDAEEEQTTKRRRPTLGVQLDDKRKEMLKRHPLSVMLDLKCKDDSVL
HLTFYYLMNLNIMTVKAKVTTATELITPISAGDLLSPDSVLSCLYPGDHGKKTPNPANQY
QFDKVGILTLRDYVLDLGHPYLWVQKLGGLHFPKEQPQHTVIADHSLSASHMETTMKLLK
TRVQSRLALHKQFASLEHGIVPVTSDCQYLFPAKVVSRLVKWVTIAHEDYMELHFTKDIV
EAGLAEDTNLYYMALVERGTAKLQAAVVLNPGYSSIPPIFQLCLNWKGEKTNSNDDNIRA
MESEVNVCYKELCGPRPSHQLLTNQLQRLCVLLDVYLETESHDDSVEGPKEFPQEKMCLR
LFRGPSRMKPFKYNHPQGFFSHR
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcagaatcaagcaagaaacggaagcccaaagtgatccgaagtgatggagctcca
tctgaaggcaagcgtaaccgttctgacacagaacaggaaggtaaatactacagcgaggag
gctgaggtggacctgcgggaccctggcagagactatgagctgtacaagtacacgtgccag
gagttgcagaggctcatggctgagatccaggacctgaagagccgaggaggcaaggatgtg
gcagttgagatagaagatcggaggatccagagctgtgtgcatttcatgactctaaagaag
cttaatcgattagcccatatcaggttgaagaaaggaagagatcagacccatgaggccaag
cagaaagtagatgcctatcacctgcagctccagaacctgttgtatgaggtgatgcacctg
cagaaagagatcaccaaatgtctggagtttaagtcgaagcatgaagaaattgatctggtc
agtttagaggagttttataaggaggctcctccagatattagcaaggctgaagtcaccatg
ggagaccctcaccagcaaaccctggcacgtctggactgggagctggagcagcgaaaaagg
ctggcagagaagtaccgagagtgcctgtccaacaaggagaagatcctcaaggagattgag
gtgaagaaggaatacctgagcagcctccagcctcgtctcaatagcattatgcaggcttcc
ctcccagtgcaagagtacctattcatgccgttcgaccaggctcacaagcagtacgagaca
gctagacatctgccaccgcctctctatgtcctctttgtccaggccactgcgtatgggcag
gcctgtgataagacgttgtctgtggcgatcgaaggcagtgtggatgaagccaaggctcta
tttaagcctcctgaagactcccaagatgatgagagcgactccgatgctgaagaggagcag
accacgaaacgccggcgacccacactgggagttcagttggatgacaagcgcaaggagatg
ctgaaaaggcacccgctatctgtcatgctggacctgaagtgcaaagatgacagtgtgctt
cacctgaccttctactacctcatgaacctcaacatcatgacggtaaaggccaaagtgaca
accgccacggagctgatcacccccatcagtgcaggtgacttgctgtctcctgactcagtc
ctgagctgtttgtatccaggggatcatggaaagaagactccgaatccagccaatcagtat
cagtttgataaagttggcatcctgactttgagagactacgtacttgacctaggtcacccc
tatttgtgggtacagaagctaggtggcctccacttccccaaagagcagccccagcacacg
gtgattgctgaccactcgctgagcgccagccacatggagaccaccatgaaactgctgaag
accagggttcaatcccgcctggccctccacaaacagtttgcatccctggaacatggcatt
gtaccagttaccagtgattgccagtacctctttcctgcaaaggttgtctcccgcctggtc
aagtgggtgacaattgcccatgaggattacatggagctgcatttcaccaaggacattgtg
gaggcaggactggctgaggacaccaatctttactacatggcactcgtggaaaggggcaca
gccaaactccaagctgctgtggtgctgaaccctggctactcctccatcccacccattttc
cagctgtgtctgaactggaaaggagagaaaaccaatagcaacgatgacaacattcgggcc
atggagagcgaggtcaacgtgtgctacaaggagctctgtggcccccgacccagccatcag
ctcttgaccaaccagctgcagcgcctatgtgtgctgctggatgtctacctggagacggag
agccacgacgacagcgtggaggggcccaaggaatttccccaggagaagatgtgtctgcgg
cttttcaggggtcccagcaggatgaagccatttaaatataaccaccctcaaggattcttc
agccatcgctga
DBGET
integrated database retrieval system