Lynx rufus (bobcat): 124518363
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Entry
124518363 CDS
T08475
Name
(RefSeq) transient receptor potential cation channel subfamily V member 4 isoform X1
KO
K04973
transient receptor potential cation channel subfamily V member 4
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04218
Cellular senescence
lruf04750
Inflammatory mediator regulation of TRP channels
lruf05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
124518363
09150 Organismal Systems
09157 Sensory system
04750 Inflammatory mediator regulation of TRP channels
124518363
09160 Human Diseases
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
124518363
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124518363
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124518363
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
Motif
Other DBs
NCBI-GeneID:
124518363
NCBI-ProteinID:
XP_046944303
LinkDB
All DBs
Position
Unknown
AA seq
871 aa
AA seq
DB search
MADPSGGPHAGPGEVAETPGDESGTPGAEAFPLSSLANLFEGEDGSPSPSPADTSRPAGP
GDGRPNLRMKFQGAFRKGVPNPIDLLESTLYESSVVPGPKKAPMDSLFDYGTYRHHPSDN
RRWRKKVIEKQPQSPKAPAPQPPPILKVFNRPILFDIVSRGSTTDLDGLLPFLLTHKKRL
TDEEFREPSTGKTCLPKALLNLSSGRNDTIPVLLDIAERTGNMREFINSPFRDIYYRGQT
ALHIAIERRCKHYVELLVAQGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHI
VNYLTENPHKKADMRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLLKCARLFPDS
NLEAVLNNDGLSPLMMAAKTGKIGVFQHIIRREVTDEDTRHLSRKFKDWAYGPVYSSLYD
LSSLDTCGEEASVLEILVYNSKIENRHEMLAVEPINELLRDKWRKFGAVSFYINVVSYLC
AMVIFTLTAYYQPLEGTPPYPYRTTVDYLRLAGEIITLLTGILFFFTNIKDLFMKKCPGV
NSLFIDGSFQLLYFIYSVLVIVSAALYLAGIEAYLAVMVFALVLGWMNALYFTRGLKLTG
TYSIMIQKILFKDLFRFLLVYLLFMIGYASALVSLLNPCANMKVCGEDPTNCTVPTYPSC
RDSETFSTFLLDLFKLTIGMGDLEMLSSTKYPVVFIILLVTYIILTFVLLLNMLIALMGE
TVGQVSKESKHIWKLQWATTILDIERSFPVFLRKAFRSGEMVTVGKSSDGTPDRRWCFRV
DEVNWSHWNQNLGIINEDPGKSENYQYYGFSHTVGRLRRDRWSSVVPRVVELNKNSNPDD
VVVPLDNMGTPSCDGHQQSYPPKWRTDAAPL
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcccagcggaggcccccacgcagggcccggggaggtggctgagacccccggg
gacgagagcgggacccccggggctgaggccttcccgctctcttctctggccaacctgttt
gaaggggaggatggctccccctccccctccccggctgacaccagccgccccgctgggcca
ggtgatgggcgaccaaatctgcgcatgaagttccagggtgccttccgcaagggggtgccc
aaccccattgacctgctggagtccaccctgtatgagtcctcggtggtgcctggacccaag
aaggcacccatggactcgctctttgactatggcacctatcgtcatcaccccagcgacaac
aggcggtggaggaagaaggtcatcgagaagcagccgcagagccccaaagctcctgcaccc
cagccgccccccatccttaaagtcttcaaccggcctatcctctttgacatcgtgtcccgg
ggctctactactgacctggatgggctgcttcccttcttgctgacccacaagaagcgcctg
actgacgaggagttccgggagccatccacagggaagacctgtctgcccaaggccctgctg
aatctgagcagtggccgtaatgacaccatccctgtgctcctggacatcgccgagcggaca
ggcaacatgcgggagttcatcaactcgcctttccgggacatctactaccgaggccagact
gccctgcacatcgccatcgagcgccgctgcaaacactacgtggagctcctggtggcccaa
ggagctgacgtccatgcccaggcccgggggcgcttcttccagcccaaggacgagggaggc
tatttctactttggcgagctgcccctgtcgctggccgcctgcaccaaccagccccacatc
gtcaactacctgacagagaacccgcacaagaaggcggacatgcggcggcaggactcccgc
ggcaacacggtgctgcacgcgctggtggccatcgccgacaacacccgtgagaacaccaag
ttcgtcaccaagatgtacgacctgttgctgctcaagtgtgctcgcctcttccccgacagc
aacctggaggccgtgctcaacaacgatgggctctcgcccctcatgatggccgccaagacc
ggcaagattggggtctttcagcacatcattcgccgggaggtgacagacgaggatacgagg
cacctgtcccgcaagttcaaggactgggcctacgggccggtgtattcctcactgtatgac
ctctcctccctggacacatgtggggaagaggcctctgtgctggagatcctggtgtataac
agcaagatcgagaaccgccacgagatgctggccgtggagcccatcaatgaactgctgagg
gacaagtggcgcaagttcggggctgtctccttctacatcaacgtggtctcctatctgtgc
gccatggtcatcttcaccctcaccgcctactaccagccactggagggcactcctccgtac
ccttaccgcaccaccgtggactacctgaggctggcgggcgagatcatcacgctcttgacc
ggcatcctgttcttctttaccaacatcaaagacttgttcatgaagaaatgcccgggagtg
aattctctcttcatcgatggctccttccagctactctacttcatctactctgtgctagtg
attgtctcagcggccctctacctggcgggaattgaagcctacctggctgtcatggtcttt
gccttggtcctgggctggatgaacgccctttactttacccgcgggctgaagctgacggga
acctatagcatcatgatccagaagatcctcttcaaagaccttttccgcttcctgctggtc
tacttgctcttcatgattggctatgcttcagccctggtgtccctcctgaacccgtgcgcc
aacatgaaggtgtgcggcgaggaccccaccaactgcacggtgcccacgtacccgtcctgc
cgcgacagcgagaccttcagcaccttcctcctggacctcttcaagctgaccatcggcatg
ggtgacctggagatgctgagcagcaccaagtaccccgtggtcttcatcatcctgcttgtc
acttacatcatcctcaccttcgtgctacttctcaacatgctcatcgccctcatgggggag
acggtgggccaggtgtccaaggagagcaagcacatctggaagctgcagtgggccaccacc
attctggacatcgagcgttccttccccgtgttcctgaggaaggccttccgctctggcgag
atggtgaccgtgggcaagagctcagatggcaccccagaccgcaggtggtgcttcagggtg
gacgaggtgaactggtctcactggaaccagaacttgggcatcatcaatgaggacccgggc
aagagcgagaactaccagtactatggtttctcgcacaccgtgggccggctccggagggat
cggtggtcctcggtggtgccgcgcgtggtggagctgaacaagaactcaaacccagacgac
gtggtggtgcctctggacaacatggggacccccagctgcgacggccaccagcagagttac
ccccccaagtggaggacagatgccgctcccctctag
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