Lynx rufus (bobcat): 124518542
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Entry
124518542 CDS
T08475
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 13-like isoform X1
KO
K15164
mediator of RNA polymerase II transcription subunit 13
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04919
Thyroid hormone signaling pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09150 Organismal Systems
09152 Endocrine system
04919 Thyroid hormone signaling pathway
124518542
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lruf03021
]
124518542
Transcription machinery [BR:
lruf03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
CDK-module
124518542
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Med13_C
MID_MedPIWI
Med13_N
Motif
Other DBs
NCBI-GeneID:
124518542
NCBI-ProteinID:
XP_046944496
LinkDB
All DBs
Position
Unknown
AA seq
2214 aa
AA seq
DB search
MTAAANWVANGASLEDCHSNLFSLAELTGIKWRRYNFGGHGDCGPIISAPAQDDPILLSF
IRCLQANLLCVWRRDVKPDCKELWIFWWGDEPNLVGVIHHELQVVEEGLWENGLSYECRT
LLFKAIHNLLERCLMDKNFVRIGKWFVRPYEKDEKPVNKSEHLSCAFTFFLHGESNVCTS
VEIAQHQPIYLINEEHIHMAQSSPAPFQVLVSPYGLNGTLTGQAYKMSDPATRKLIEEWQ
YFYPMVLKKKEELKEEEELGYDDDFPVAVEVIVGGVRMVYPSAFVLISQNDIPVPQSVAG
AGGHITIGQQGLGSVKDPSNCGMPLTPPTSPEQAVMGESGGTQSAVSHLGSQDGGMITMH
SPKRSGKIPPKLHNHMVHRVWKECILNRTQSKRSQMSTPTLEEEPANNPATWDFVDPTQR
VSCSCSRHKLLKRCAVGPSRPPAASQPGFGAGPSSSSSLPPPASKHKTTERPEKGDKLQK
RPLIPFHHRPSVADEFCVEQDTPGQKLGLAGIDSSLEVSSSRKYDKQMAVPSRNTSKQMN
LNPMDSPHSPISPLPPTLSPQPRGQETESLDPPSVPVNPALYGNGLELQQLSTLDDRTVL
VGQRLPLMAEVSETALYCGIRPSNPESSDKSWNSYRLPPVDDAEFRPPELQGERCDAKME
VNSESTALQRLLAQPNKRFKIWQEKQPQMQPLHFLDPLPLSQQPGDSLGEVNDPYTFEDG
DIKYIFTANKKCKQGAEKDSLKKNKSEDGFGTKDVTTPGHSTPVPDGKNAMSIFSSATKT
DVRQDSAAGRAGSSSLTQVTDLAPSLHDLDNIFDNSDDDELGAASPALRSSKMPAVGAED
RPLGKDGRAAVPYPPTVADLQRMFPTPPSLEQHPAFSPVMNYKDGISSETVTALGMMESP
MVSMVSTQLTEFKMEVEDGLGSPKPEEVKDFSYVHKVPTFQPFVGSSMFAPLKMLPSQCL
LPLKIPDACLFRPSWAVPPKIEQLPMPPAAIFSRDGYNNVPSVGSLADPDYLNTPQMNTP
VTLNSAAPASNSGAGVLPSPATPRFSVPTPRTPRTPRTPRGGGTASGQGSVKYDSTDQGS
PASTPSTTRPLNSVEPATMQPIPEAHSLYVTLILSDSVMNIFKDRNFDSCCICACNMNIK
GADVGLYIPDSSNEDQYRCTCGFSAIMNRKLGYNSGLFLEDELDIFGKNSDIGQAAERRL
MMCQTTFLPQVEGARKSQEPPISLLLLLQNQHTQPFASLSFLDYISSNSRQTLPCVSWSY
DRVQADNNDYWTECFNALEQGRQYVDNPTGGKVDEALVRSATVHSWPHSNVLDISMLSSQ
DVVRMLLSLQPFLQDAIQKKRTGRTWENIQHVQGPLTWQQFHKMAGRGTYGSEESPEPLP
IPTLLVGYDKDFLTISPFSLPFWERLLLDPYGGHRDVAYIVVCPENEALLEGAKTFFRDL
SAVYEMCRLGQHKPICKVLRDGIMRVGKTVAQKLTDELVSEWFNQPWSSEENDNHSRLKL
YAQVCRHHLAPYLATLQLDGSLLIPPKYQSPPAAAQGQATPGNAGPLASNSGSAAPSAGS
AFNPTSSSSSGNPAAGSSASGSSVPPVSASAPAPAPAPVVNQISTTSSSGFSASVGGQNP
GSGAGSADRTQGSAGCGGDPEPGQSSSQPSQDGQESVTERERIGIPTEPDSADSQAYPPA
VVIYMVDPFTYTADEDSTSGNFWLLSLMRCYTEMLDNLPEHMRNSFILQIVPCQYMLQTM
KDEQVFYIQYLKSMAFSVYCQCRRPLPTQIHIKSLTGFGPAASIEMTLKNPERPSPIQLY
SPPFILAPIKDKQTELGETFGEASQKYNVLFVGYCLSHDQRWLLASCTDLHGELLETCIV
NIALPNRSRRSKVSARKIGLQKLWEWCIGIVQMTSLPWRVVIGRLGRLGHGELKDWSILL
GECSLQTISKRLKDVCRMCGISAADSPSILSACLVAMEPQGSFVVMPDAVTMGSVFGRST
ALNMQSSQLNTPQDASCTHILVFPTSSTIQVAPANYPNEDGFSPNNDDMFVDLPFPDDMD
NDIGILMTGNLHSSPNSSPVPSPGSPSGIGVGSHFQHSRSQGERLLSREAPEELKQQPLA
LGYFVSTAKAENLPQWFWSSCPQAQNQCPLFLKASLHHHISVAQTDELLPARNSQRVPHP
LDSKTTSDVLRFVLEQYNALSWLTCNPATQDRTSCLPVHFVVLTQLYNAIMNIL
NT seq
6645 nt
NT seq
+upstream
nt +downstream
nt
atgactgcggcagcgaactgggtggcgaacggggcgagcctggaggattgtcactccaac
ctcttctcgctggctgaactcacgggaatcaaatggcgtaggtacaattttggagggcat
ggggactgtggacccataatttcagccccagcccaagatgatccaatcctgttaagtttc
atccgctgtttgcaagccaacttgctgtgtgtatggcgtcgcgatgtcaaaccagattgc
aaagagttatggattttctggtggggagacgaacccaacctagtgggtgtaatacatcat
gaactgcaggttgtggaagaaggactctgggaaaatggcctttcctatgaatgtcggaca
ctgctcttcaaagcgatccacaatctgttagaaaggtgcctaatggataagaacttcgtt
aggattgggaagtggtttgtccgaccgtatgaaaaggatgaaaaaccagtcaacaaaagt
gagcatctgtcctgcgcgttcacattctttcttcatggagaaagtaatgtgtgcacaagt
gtggagattgcccaacaccagccaatttatttaatcaatgaggaacatatacacatggct
cagtcttcacctgcaccatttcaagtactggtaagtccttatggcttaaatggcacgctg
acaggccaagcatacaagatgtcagaccccgccacccgtaagttgattgaggaatggcag
tatttctacccaatggtgctgaaaaagaaagaggagttgaaagaagaagaggagttggga
tatgatgatgatttccctgtggcagtcgaagtaattgttggtggcgttcggatggtttat
ccttcagcatttgttttaatctctcagaatgacataccggttcctcagagcgttgccggt
gctggaggccacattaccatcgggcagcagggactaggtagtgtgaaggacccaagtaac
tgtggaatgcctctcacccctcccacctctccagaacaggctgtaatgggggagagcgga
ggtacgcagagtgcggtcagtcacctaggttcccaagacggggggatgataactatgcac
agtccaaagagatcggggaagattcctccaaaactccacaatcacatggtccatcgagtc
tggaaggaatgcatcctcaacagaacccagtccaagaggagccaaatgtcgactccaact
cttgaagaagagcctgctaataatcctgctacttgggattttgtggatccaacccaaaga
gtcagctgttcttgctctaggcataaacttctaaaacgttgtgcggtaggacccagtcga
cctcccgcagcatctcagcctgggttcggtgcaggaccatcatcatcttcatctttacca
cctcctgcttccaagcacaaaacgacagaaagaccagaaaagggagacaagttgcagaag
agacccttgataccatttcaccacaggccgtctgtggctgatgagttctgtgtggagcaa
gatacaccaggacagaagctagggttggcagggatcgactcctccctagaggtgtctagc
agtaggaagtatgataaacaaatggccgtgccttccagaaatacaagcaagcaaatgaat
ctgaatcctatggattcacctcattcccctatttcccctctgccgccaacactcagccct
cagccacgaggtcaggaaacggagagtttggacccgccatctgtccctgtgaacccagcc
ctctatggaaacgggctagaactccagcagttgtcaactctggatgacagaactgtcctc
gtaggccaaagactgcctctgatggcagaggtcagcgagacagccttatattgtgggatt
aggccctcgaacccggagtcgtcagacaagtcgtggaacagctaccgtctcccgcccgtt
gacgatgctgagttccggcctccagagctccagggcgagaggtgtgatgccaaaatggag
gtaaactcagagagcaccgcgctgcaaagactcttagcacaacctaacaaacggtttaaa
atctggcaagaaaagcagccccagatgcagccactccacttccttgacccattgcctctg
tctcagcaacctggagacagtttgggagaagtcaatgatccatacacctttgaggatggc
gacataaaatacatctttacggcaaacaagaaatgcaaacaaggggcagagaaagattcc
ctgaaaaagaataagtcagaggatggatttggtaccaaggatgtcactacaccaggtcat
tccacgccggtgcctgatgggaaaaatgccatgtctattttcagttctgctactaaaaca
gatgtccggcaggacagtgctgctggcagagccggctccagtagccttacccaggtgaca
gatctggcaccttccctgcacgacctagacaacatctttgataattccgatgacgacgaa
cttggggctgcatcacctgcgctgcgctcatccaaaatgcctgcagttggggcagaagac
cggcctcttgggaaggacggaagagctgctgttccgtacccaccaacagttgcagacttg
caaaggatgtttcccacccctccttctttggaacagcaccctgcattttctcctgtgatg
aattataaagatggaatcagttcagagacagtgacagcattaggcatgatggagagccct
atggtcagtatggtttcaacacagctcactgaattcaaaatggaagtagaagatggatta
ggaagtcccaagccagaggaagtaaaggacttttcatacgtgcacaaagttccaactttt
caacctttcgtgggttcctccatgtttgctccactgaagatgttgccgagccagtgcctg
ctacctctgaagatacctgatgcctgtctgtttcggccttcgtgggcggtgcctcccaaa
attgaacagctgcccatgccgcctgcagccattttcagtagagacggttacaacaacgtg
cctagtgtcgggagcctagcagacccagactacctgaatacgccccagatgaacacgccg
gtgacgttgaacagcgctgccccagccagcaacagcggggcaggagttttgccatctcca
gcaacccctcgcttctctgtccccacaccacgaacccccaggaccccaagaactcccaga
ggagggggcactgccagtggtcaagggtcggttaaatacgacagcaccgatcagggctca
cctgcctctactccctccaccacgcggccccttaactctgtggagcctgccaccatgcag
ccgattcccgaagcccacagtctctacgtcaccctgatcctctcagattccgtgatgaat
atttttaaagacagaaactttgacagctgttgcatctgtgcctgcaacatgaacatcaaa
ggggcagatgttgggctttacatccccgattcttccaacgaggaccagtatcgctgtacc
tgtgggtttagtgcgattatgaatcgcaaacttggctacaattcgggactcttcctggaa
gatgagttggatatctttgggaagaattctgatattggtcaggccgcggagaggcgctta
atgatgtgtcagactaccttccttcctcaggtggagggagccagaaagtcccaggagcca
cctataagcctcctcctcctcctccagaatcagcatacacaaccttttgcttcactgagt
ttcttggactacatttcctccaacagtcgccagactcttccctgtgtaagctggagttac
gaccgggtgcaggcagataataatgattattggacggaatgctttaatgccttggagcag
ggccgacagtatgtggacaatcccacgggtggaaaagtagacgaagcgctggtgagaagt
gccactgtgcactcttggcctcacagcaatgtgctggacatcagtatgctctcctcccaa
gatgtggtccgtatgctgttgtctctgcagccctttctccaagacgccatccagaagaag
cgcacaggcaggacctgggagaatatccagcatgtgcagggaccgctaacctggcagcag
ttccacaagatggcaggacgggggacctacggttccgaagaatctcctgagccgttgccc
atccccaccctgctggtaggctatgacaaggacttcctcaccatctcgccgttctccttg
ccattttgggagaggctgctgttggacccatatgggggccaccgggatgttgcctatatt
gtggtgtgtccagaaaacgaggccttgctcgaaggagccaaaactttcttcagggacttg
agcgctgtatatgagatgtgtcggcttgggcagcacaagcccatctgcaaagtgctacga
gatgggatcatgcgcgtgggaaagactgtggcacagaagctgacggatgagcttgtgagc
gagtggtttaaccagccgtggagcagcgaggagaatgacaatcattccagactcaaactt
tatgcgcaagtttgccgccatcacctagcaccttatctagccactctgcagctcgatggc
agcctgctgataccacctaagtaccagtccccaccagcagcagcacagggacaagccacc
cccgggaacgctgggcctctagcttcaaattcaggatcggcagcgccctcagccggcagt
gcgttcaaccccacctccagcagcagttccgggaaccccgcggcaggcagctcggcctcc
gggtcctctgtgccgccggtctccgcctccgcccccgcccccgcccccgcccccgttgtt
aaccagatcagcactacctcttcttcaggattcagtgctagcgtcggagggcagaacccc
ggcagcggggccggttctgcagacagaacgcaagggagcgcaggctgtggcggagacccg
gagcccgggcagagctcctctcagccctcacaggatggacaagaaagtgtcacagaaagg
gaaagaataggaattcccactgaacccgactctgcagacagccaagcctatcctccagct
gtggtcatttacatggtggaccccttcacctacactgcagacgaagactccacttccgga
aacttttggctgttgagtttgatgcgctgctacacggagatgctggataatttacccgaa
catatgagaaattctttcattctccagatcgtgccttgccagtacatgctgcagacaatg
aaggacgaacaagttttctacattcagtacttgaagtccatggcattttcggtgtactgc
cagtgccggcgccctctgcccacacagatccacattaagtccctcacgggatttgggcct
gccgccagcatcgagatgaccctcaagaacccagagcgacccagtccaatccagctttac
tcccctccttttatattggccccaattaaagataagcagacggagctgggagaaactttt
ggggaggcgagccagaagtacaacgtgctctttgtgggctactgtctgtctcatgaccag
cgctggcttttggcttcctgcactgacctccatggggaattattagaaacttgtattgta
aatattgctttaccaaacaggtcacggaggagtaaagtatctgcacgtaaaattggacta
cagaagttatgggagtggtgcataggtattgtccaaatgacatccctaccctggagagtt
gtaatcggcagacttgggcggcttggccatggagagcttaaagattggagtatcctcctt
ggcgaatgttcactacagacaatcagcaaacggctcaaagacgtgtgccggatgtgtggg
atctctgccgctgactctccctctatccttagtgcctgcctggttgccatggagccccag
gggtcctttgtagtgatgccagacgctgtcacaatgggctctgtatttggccgaagcacc
gcgctgaacatgcagtcgtcgcagctgaacacccctcaagatgcctcctgcacacacatc
ctggtgttccccacctcgtcaaccatccaggtggccccggcaaactatcccaacgaagac
gggttcagccccaacaacgatgacatgtttgttgaccttccattcccagatgatatggat
aatgacattggcatcttaatgactggcaacctccattcctctcccaactcctccccagtt
ccttccccaggctctccttctggaattggtgtgggctctcacttccagcatagtcggagt
cagggtgagcgtcttctttctagagaggcacccgaggagctgaagcagcagcccctggcc
cttgggtatttcgtgtcaactgccaaagcggagaatctcccccagtggttttggtcatcg
tgtccccaggctcagaaccagtgccccctcttcctaaaggcttcgctgcaccaccacatt
tctgtagcacagacggatgaacttctccctgccaggaattctcagcgggttccccatcct
cttgactccaaaaccacatctgacgttttaaggttcgttttggagcagtacaacgctctg
tcctggctcacgtgcaatccggccacccaggaccgcacctcctgccttcccgtccacttt
gtggtgctcactcagttgtacaacgccatcatgaacatactttaa
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integrated database retrieval system
