Lynx rufus (bobcat): 124518543
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Entry
124518543 CDS
T08475
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124518543
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
124518543
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
TP_0584_N
Helicase_C
Motif
Other DBs
NCBI-GeneID:
124518543
NCBI-ProteinID:
XP_046944500
LinkDB
All DBs
Position
Unknown
AA seq
1393 aa
AA seq
DB search
MVEPGQDLLLAALSESGISPNDLFDIDGGDAGLATPTPTPPVQQSVPLSALELGLETEAA
VPVKPEQETVPTPALLNVRQQPPSTTTFVLNQINQLPTLGSTIVMTKTPPVTTNRQTITL
TKFIQTTANTRPSVSAPAVRNAMTSAPSKDQVQLKDLLKNNSLNELMKLKPPANIAQPVA
TAATDVSNGTVKKESSNKEVARIWINDMKMRSFSPTMKVPVVKEEDEPEEEDEEEMGHAE
TYAEYMPIKLKIGLRHPDAVVETSSLSSVTPPDVWYKTSISEETIDNGWLSALQLEAITY
AAQQHETFLPNGDRAGFLIGDGAGVGKGRTIAGIIYENYLLSRKRALWFSVSNDLKYDAE
RDLRDIGAKNILVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQSGGKYKTRLKQ
LLHWCGDDFDGVIVFDECHKAKNLCPVGSSKPTKTGLAVLELQNKLPKARVVYASATGAS
EPRNMAYMNRLGIWGEGTPFREFSDFIQAVERRGVGAMEIVAMDMKLRGMYIARQLSFTG
VTFKIEEVLLSQSYVKMYNKAVKLWVIARERFQQAADLIDAEQRMKKSMWGQFWSAHQRF
FKYLCIASKVKRVVQLAREEIKNGKCVVIGLQSTGEARTLEALEEGGGELNDFVSTAKGV
LQSLIEKHFPAPDRKKLYSLLGIDLTAPSNNSSPRDSPCKENKVKKRKGEEITREAKKAR
KVGGLTGSSSDDSGSESDASDHEESDYESSKNMSSGDDDDFNPFRDESSEDDEDDPWLIR
KDHKKNKDKKKKKSIDPDSIQSALLASGLGSKRPSFSSTPVILPAPNSAPANSNTNSNSS
LITSQDAVERAQQMKKDLLDKLEKLAEDLPPNTLDELIDELGGPENVAEMTGRKGRVVSN
DDGSISYESRSELDVPVEILNITEKQRFMDGDKNIAIISEAASSGISLQADRRAKNQRRR
VHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFASIVAKRLESLGALT
HGDRRATESRDLSRFNFDNKYGRNALEIVMKSIVNLDSPMVSPPPDYPGEFFKDVRQGLI
GVGLINVEDRSGILTLDKDYNNIGKFLNRILGMEVHQQNALFQYFADTLTAVVQNAKKNG
RYDMGILDLGSGDEKVRKSDVKKFLTPGYSTSGHVELYTISVERGMSWEEATKIWAELTG
PDDGFYLSLQIRNNKKTAILVKEVNPKKKLFLVYRPNTGKQLKLEIYADLKKKYKKVVSD
DALIHWLDQYNSSADTCTHAYWRGNCKKASLGLVCEIGLRCRTYYVLCGSVLSVWTKVEG
VLASVSGTNVKMQIVRLRTEDGQRIVGLIIPANCVSPLVNLLSTSDQSQQLAVQQKQLWQ
QRHPQSIANLSNA
NT seq
4182 nt
NT seq
+upstream
nt +downstream
nt
atggtggagccagggcaagatttactgcttgctgctttgagtgagagtggaattagtccg
aatgacctctttgatattgatggtggagatgcagggcttgcaactccaacacctactcct
ccagttcagcagtcagtgccacttagtgcgttagaattgggtttggagactgaagcagca
gttcctgttaaaccagaacaagagacagtacctactccagcactgttaaatgttaggcag
cagcctccatctactacaacatttgtgctgaatcaaataaatcagcttccgaccttggga
tctacaattgtaatgactaaaacaccgcctgtaacaacgaataggcagaccatcacatta
acaaagtttatccagactactgcaaacacacgcccttcagtctcagcaccagcagtacga
aatgccatgacctctgcaccctcaaaagaccaggttcagctgaaggatctactaaaaaat
aatagtctgaacgaactcatgaaactgaagccaccagctaatattgctcagccagttgca
acagcagctactgatgtaagcaatggtacagtcaagaaggagtcttctaataaagaagta
gcgagaatatggataaacgacatgaaaatgaggagtttttccccaaccatgaaggtccct
gttgtgaaagaggaagatgaaccagaggaggaagatgaagaagaaatgggtcatgcagaa
acctacgcagaatatatgccaataaaattaaaaattggcctacgtcatccagatgctgta
gtggaaactagttctttatccagtgttactcctcctgatgtttggtacaaaacatccatt
tcggaagaaaccattgataatggctggttatcagcgttacagcttgaggcaattacttac
gcagcgcagcaacatgaaacattcctacctaatggagatcgtgctggcttcttaataggt
gatggtgctggtgtaggaaaaggaaggacgatagcaggaatcatctatgaaaattatttg
ttgagtagaaaaagagcattatggttcagtgtttcaaatgacttgaagtatgatgctgaa
agagatttgagggatattggagcaaaaaacattttggttcattcattaaataagtttaaa
tatggaaaaatttcttccaaacataacgggagcgtgaaaaagggtgttatttttgctacc
tattcttcccttattggtgaaagtcagtctggtggtaaatacaaaactagattaaaacaa
cttcttcattggtgtggtgatgacttcgatggagtgatagtctttgacgaatgccataaa
gcaaaaaacttatgtcctgttggttcttcgaagccaaccaagacaggcttggcagtttta
gagcttcagaacaaattgccaaaggccagagttgtttatgctagtgccactggtgcttct
gaaccacgaaacatggcctatatgaaccgtcttggaatatggggtgagggaactccattt
agagaattcagtgattttatccaagcagtagaacggagaggtgttggtgccatggaaata
gttgctatggatatgaaacttagaggaatgtacattgctcgacagctgagctttactgga
gtgaccttcaaaattgaggaagttcttctttctcagagctatgtgaaaatgtataacaaa
gcagtcaagctgtgggtcattgccagagagcgatttcagcaagctgcagatctgattgat
gctgagcaacgcatgaagaaatccatgtggggtcagttctggtctgctcaccagagattt
ttcaaatacttgtgtatagcatccaaagttaaaagggttgtgcaactagctcgagaagaa
atcaagaatggaaaatgtgtcgtaattggtctgcagtcgacaggagaagctagaacatta
gaagccttggaggagggtggaggagaattgaatgattttgtttcaactgccaaaggggtg
ttgcagtcactaattgaaaaacacttccctgctccagatcgaaaaaaactgtatagtttg
ttaggaattgatttgacagctccaagtaacaatagttcaccaagagatagtccttgtaaa
gaaaataaagtgaagaagcggaaaggtgaagaaataacccgagaagccaaaaaagcacga
aaagtaggtggccttactggtagcagttctgatgacagtgggagtgaatctgacgcgtct
gaccatgaagaaagtgactatgagagctcaaaaaacatgagttccggagacgatgatgac
ttcaacccgttcagagatgagtctagtgaggatgacgaagacgatccctggttaatcagg
aaagatcacaagaaaaacaaagataaaaaaaaaaagaaaagtatagatccagattctatt
caaagtgccttattagcatcaggtcttggatcaaaacgacctagtttttcatctacgcca
gtaattttgcctgctcctaacagtgcaccagccaacagtaacaccaacagtaacagtagc
cttataacgagtcaggatgctgtggaaagagcccagcagatgaagaaagacctacttgat
aaactagaaaaattagctgaagacctccctcctaataccctggatgaacttattgatgaa
cttggtggccctgagaatgttgctgagatgactggccgcaaagggagggttgtaagcaat
gatgatggaagcatatcttatgagtcaagatctgaacttgatgtccctgtggaaatacta
aatattacagaaaaacaaagatttatggatggagataagaatattgctatcatctcagaa
gctgccagctcgggtatttcattacaagcagatcggagagctaaaaatcaaaggcgacgg
gttcacatgactttggaattaccctggagtgctgatagagcaattcagcagttcggacgg
actcatagatcaaaccaagtcactgctcccgaatatgtgtttctgatttctgaattggca
ggagagcaaagatttgcttctattgttgctaaaagacttgagagtttgggagcgcttaca
catggtgacagaagagcaacagaatctagagatctgagcaggttcaattttgataataag
tatggaagaaacgctttagaaattgtcatgaaatctattgtcaacctggattctcctatg
gtatcaccacctccggactatcctggagaattctttaaagatgttcgacaaggactgata
ggagttggcctgataaatgtagaagatcgctcaggaattctgactctagataaagattat
aataacataggaaaattcttaaacagaattctcggcatggaggtgcaccagcagaatgcg
ctctttcagtattttgcagacacacttacagccgttgttcagaatgccaaaaaaaatgga
cgatatgatatgggaattttagatcttggttctggagatgaaaaagtgaggaaaagtgat
gttaagaagtttttgactccaggatattcaacctctggtcatgtagagttatacactatt
agtgtagagagaggaatgtcttgggaggaagctaccaagatttgggctgagctgacagga
ccagatgatggcttttacttgtcactgcaaataaggaacaacaagaaaactgccatcttg
gttaaagaagtgaacccaaaaaagaagcttttcttagtttatagaccaaatactggaaaa
cagctcaaattagaaatttatgctgatctaaaaaagaaatacaagaaggtagtctcagat
gatgccctgatccactggttagatcagtataattcatctgcagacacttgtactcatgct
tattggcgtggcaactgtaaaaaggcaagcttgggattagtttgtgaaataggtcttcgt
tgccgcacatactacgtattatgtggctccgtactgagtgtctggacaaaggttgagggt
gttctagcatctgtcagtggcacaaatgtgaaaatgcagattgttcgactgagaacagag
gatggacaacggattgtaggtttgatcattcctgcaaattgtgtgtctcctcttgtaaat
ctcctgtcaacttcagaccagtctcaacagcttgcggtccaacagaaacagctctggcag
cagcgtcacccgcagagcatcgccaacttgagcaacgcttaa
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