Lynx rufus (bobcat): 124518635
Help
Entry
124518635 CDS
T08475
Name
(RefSeq) HEAT repeat-containing protein 1
KO
K14550
U3 small nucleolar RNA-associated protein 10
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124518635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lruf03009
]
124518635
Ribosome biogenesis [BR:
lruf03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
124518635
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_HEATR1
BP28CT
U3snoRNP10
HEAT
HEAT_EZ
HEAT_2
RTP1_C1
Vac14_Fab1_bd
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
124518635
NCBI-ProteinID:
XP_046944597
LinkDB
All DBs
Position
Unknown
AA seq
2141 aa
AA seq
DB search
MTSLAQQLQRLALPQSDRSLLSRDEVASLLFDPKEAATIDRDTAFAIGCTGLEELLGIDP
SFEQFEAPLFSQLAKTLERSVQTKAVNKELDENISLFLIHLSPYFLLKPAQKCLEWLIHR
FHIHLYNQDSLIACVLPYHETRIFVRVIQLLKINNPKHKWFWLSPVKQHGVPLARGTLIT
HCYKDLGFMDFICSLVTKSVKVFVEYPGSSAQLRVLLTFYASTIVSALVTAEGVLDNIVA
KLFPYIQKGLKSSLPDYRAATYMIICQISVKVTMEDTFVNSLASQIIKTLTKIPSLIKDG
LGCLIVLMQRQKPESLGKKPFPHLCNVPDLITILHGISEVYDVSPLLRYMLPHLVVSIVN
HITGEETEGTDGQIYRRHLEAILTNISLKNNLDHLLASLLFEEYISYSSQEEIGPDKVSL
LNEQFLPLIRLLESKYPRTLDVVLEERLKEITDLKKQELFHQFISLSTSGGKYQFLADSD
TSLMLSLNHPLAPVRLLAVNHLKNIMKTSEENVDESFIKEAVLTRLGDDSLDVVLSAINA
FEIFKQHFSSEVTVSNLLNLFRRAELSKNRGWYKVLEVAADILIKEELLKENDHLSNQVV
VHLLPFMIIISDDMESAEMKIAIYLSKSGICSLHPILRGWKEALENVIKSTESGKLIGVA
NQKMIALLADNISSGDPSSMLKMVEDLISLGEKDCFSLKQKVTFHLVTAVLVSCCSSLKE
THFPFAIRVFSLLQKKIKKLEGVITAVEIPSEWHFELMMDREIPVELWTHYIEQLNTAQN
IAVEDSVLLIFSLKNFIHALKAPKSFPREDVWWDPEQLREDSRAYVRLLIGLFETILTGA
DAVHFRVLMKLFIKVHLQDVFQFFKFFSVLWTYGSSLSNPLNCSVKTVLRTQALYIGCAM
LSSQKAQNKHQLASVSSPVVTSLLINLGSPIKEVRRASILCLQALSGVVSHFHLVVDHLV
PKTEEITSDATYVTQDLAALFEELRREKKLKSHQKLSETLKNLLNCVYSSPSYIAKDLMK
VLQEVSSEMVLSQLLPMAEQLLEKIQKDPTAVLKDEAIILQLTLGKYNEYSASLLHKDPK
SLDIFIKAVHTTRELGAGMPTVQITALEKITKPFFAAVADEKVQQKLLHMLFDLLVNCKN
SHCAQTVNSVFKGISVNAEQVRIELEPPDKTKSLGTIQQTRRQKMQQKKSQDLESVQEVG
GSYWQRVTLILELLQHKKKLKSPQILIPTLFNLLARSLEPLPPEQGNMEYTKQLILSCLL
NICQKLSPEGGKIPKDVLDEEKFNVELIVQCIRVSEMPQTHHHALLLLGTVAGIFPDKVL
HNIMSIFTFMGASVMRLDDTYSFQVINKTVKMVIPALIQSDGGDSVEVTRNVEEVVVKIV
NVFVDALPHVPEHRRLPILVQLVDTLGAERFLWVLLVLLFEQYVTKTVLLAACGEKDAIL
EADTEFWISVCCEFSVQHQIQSLMNILQYLMKLPEEKEEAVSKAASTKSESQEEVLQIFN
IDTHTSKQLRHFKFLSVSFMSQLLASNNFIRKVVESGGPQVLKGLEQRLLETVLGYINAV
AQSMEKNADKLTVKFWRALLSKAYDMLDKVNALLPTETFIAVIRGLLGNPLPSVRRKALD
LLNNKLQQHTSWKKTIVYRFLKLVPVLLAIVQHKKKTEEQAINRQTALYTLKLLCKNFGA
ENPEPFVPVLSTAVKLIAPETKEEKNVLGSALLCVAEVTSTLEALAIPQLPSLMPSLLTT
MKNTSELVSGEVYLLSALAALQKVVETLPHFISPYLEGVLSQVVHLEKITGGMGSASQAN
IRITSLKKTLATALSPRVLLPAINKTYKQIEKNWKKHMRPFMSILQEHIGVMKKEELTSH
QAPLTVFFLEALDFRAQHSEDDLEEIGKTENCIIDCLVAMVVKLSEVTFRPLFFKLFDWA
KTEDAPKDRLLTFYNLADNIAEKLKGLFTLFAGHLVKPFADTLNQVNISKTDEAFFDSDN
DPEKCCLLLQFILNCLYKIFLFDTQHFLSKERAEALMMPLVDQLENRLGGEERFQERVTK
HLIPCIAQFSVAVADDSLWKPLNYQILLKTRDSSPKVRFAALITVLALAEKLKENYLVLL
PESIPFLAELMEDECEEVERQCQRTVQQLEAVLGEPLQSYF
NT seq
6426 nt
NT seq
+upstream
nt +downstream
nt
atgacgtccttagcccagcaactccaacgcctcgccctccctcagagtgaccgcagtctg
ttatcgagagatgaagttgcttctttgttgtttgaccccaaagaagcggccaccatcgac
agggacaccgcttttgccattggatgcactggcctggaagagctgcttgggatcgatcct
tcctttgagcagtttgaagcaccgttgttcagccagctggcaaaaacattggagcgcagc
gttcagaccaaagcagtgaacaaagagctggatgaaaacatttcattattccttattcac
ttgtccccttacttcctgctgaagccagcacagaagtgtctggagtggttgattcacagg
ttccatatccatctttataatcaagatagcctcattgcttgtgttctaccataccacgag
accagaatatttgtacgggttatacagcttctgaaaattaataatccaaagcacaaatgg
ttttggttgtcaccagttaagcaacatggagtgcccttagctaggggaactttgattacc
cactgctacaaagatcttggattcatggatttcatttgtagtctggtgacaaaatctgtg
aaggtttttgttgagtatcctgggagttcagctcagttgagagtgctcttaactttctat
gcttctaccatcgtgtctgctctagtgactgctgagggcgtattggataatatagtcgcc
aagctatttccatatatccaaaaggggttgaaatcatctttaccagattacagagctgca
acgtacatgataatatgtcagatttctgtgaaagtgacaatggaggacaccttcgtcaat
tcgttggcttcacagatcatcaaaacgttgaccaaaattccttctttgatcaaggatgga
ttaggttgcttaatagtgctcatgcagagacagaagccagagagccttgggaaaaagcca
tttcctcatctgtgtaacgttcctgatcttattacaatacttcatgggatttctgaagtc
tatgatgtcagtcctcttctgcgttacatgcttccccatctggtcgtctccatcgttaat
catattacaggtgaagaaactgaagggacagatggtcaaatctacaggagacatttagaa
gctatacttacaaatatatcactgaagaacaacttagatcatttgctggctagccttctt
tttgaagagtatatttcatatagttcacaggaagaaatcggtcctgataaagtatctttg
cttaacgaacagtttcttccacttatcagacttttggaaagcaaatatccccgaacatta
gatgttgtattagaggaacgcctaaaagaaattacagatctaaaaaaacaggagcttttt
catcagtttatctctctttctacaagtggaggaaagtatcagtttttagcagattctgat
acgtctttgatgctcagtctgaaccatccacttgctcctgtgagacttctggctgttaat
catctgaaaaatatcatgaagacatcagaggagaatgtcgatgagtctttcataaaagaa
gctgttttaacccgattaggtgatgatagtttagatgttgttttgtcggctataaatgct
tttgagatttttaaacaacactttagttcagaagtgactgtttcaaatcttctaaatctc
tttcgaagagcagaactttcaaaaaataggggatggtacaaggtacttgaggtagcagca
gacatattaattaaggaagagctactgaaagaaaatgatcacttgtcaaatcaggtggtg
gtacatctgctgccgtttatgattatcatcagtgatgacatggaatctgcagagatgaaa
atcgctatatatttatcaaaatcaggaatttgctctctgcaccctatattaaggggctgg
aaggaagctcttgaaaatgtgattaaaagcacagagtcaggaaagctaattggtgtggca
aatcagaagatgattgcgttattggctgacaatataagttcaggggatccttcttcaatg
ttaaagatggtggaggatttaataagccttggggagaaggactgctttagtctgaagcag
aaagtgacttttcacctggtcacggctgtgctggtttcttgctgttcatctttaaaggaa
actcactttccatttgcaataagagtctttagtttgttgcagaaaaaaataaagaagctt
gaaggtgtcattactgcagtggaaatcccctcagaatggcattttgagctgatgatggac
agagagataccagtggaactgtggacacattacatagaacagctcaacaccgcccagaat
attgctgtggaggattcagttttactcatattttcactgaaaaattttattcatgcacta
aaggcccctaaatcctttcctagagaggacgtgtggtgggaccccgaacagctgcgagaa
gacagcagggcctatgtgcgcttgctcattgggctctttgagacgatactcaccggtgct
gatgccgttcattttagggtcctgatgaaactgttcataaaggtgcatctacaagatgtt
tttcagttcttcaagttcttttctgttttatggacgtatgggtctagcctttcaaatcca
cttaactgcagcgtgaaaacagtgctgcggacccaagctctttatatagggtgtgcgatg
ctctcttctcagaaagcacagaataaacatcagctggcatctgtctcttctccagtggtg
acatctctactcattaatctgggaagccccataaaagaagtacgaagggcctccattctt
tgtctccaggccctcagtggagtggtgtctcatttccatctggtagtagatcatttggtt
cctaaaacagaggagatcacctcagatgccacctatgttactcaggatttggctgcttta
tttgaagaactgcggagagaaaagaaactaaaatctcatcagaaattatcagaaactttg
aaaaacctacttaattgtgtatatagttccccatcttatattgcaaaggatttgatgaaa
gtacttcaggaagtcagcagtgagatggtgctttctcagctgttgcctatggctgaacaa
ctgttagaaaagatccaaaaggacccgacagctgtcctgaaagatgaggccattattttg
caactcactctgggaaaatataatgaatattcagcatcccttttacataaggacccaaag
agcctagatatatttataaaagccgtgcatacaacaagggaacttggcgcaggaatgcca
accgttcagattacagcccttgaaaagattacaaagccattttttgcagctgtagcagat
gaaaaagttcagcagaagcttttgcacatgttgtttgatttattggtgaactgtaaaaat
tcacattgtgctcagaccgttaacagtgtttttaaagggatttctgttaatgctgaacaa
gtcagaatagaattggagccaccagataaaacgaagtccttgggtacaattcagcaaaca
agaaggcaaaaaatgcagcagaaaaaatcacaagatctagaatctgttcaggaagttgga
ggttcttactggcaaagagtaaccctcatcctagaattactgcagcacaaaaagaaactc
aaaagtcctcagatactgataccgactctttttaacctgctagcaaggagtttagaacct
ttgccaccagagcagggaaatatggaatacaccaaacaattaatacttagttgtttgctt
aacatctgccagaagctctctccagaaggtggcaaaataccaaaggatgttctagatgag
gagaagttcaatgtggaattaattgtccagtgcatccgtgtttcagagatgcctcagacc
catcaccatgcccttttacttttgggtactgtggctggaatatttcctgataaagttcta
cataatatcatgtctattttcacatttatgggagccagtgtcatgcgtctagatgatact
tacagttttcaagttattaacaagacagtgaaaatggttatcccagcacttattcagtct
gatggtggagactcggtggaagtcacaagaaacgtggaagaggtcgtggtgaaaatcgtg
aacgtatttgtggatgcgctgccccacgtcccagagcacaggcgcctgcccatcctcgtt
cagcttgtcgacacactgggtgcagaaagattcctctgggtcctcctcgtcctgcttttt
gaacagtatgtcacgaaaacagtgctgctggctgcctgtggagaaaaggatgctatttta
gaggcagacactgagttttggatttcagtctgttgtgaatttagtgtccaacatcagata
caaagcttgatgaatatccttcagtacctaatgaagctgccagaggaaaaagaagaagct
gtttccaaagcagcatcaactaaaagtgaatcacaagaagaggtgctacagatttttaat
atagacactcacacaagcaagcagctgcggcattttaaatttttgtccgtgtccttcatg
tctcagctcctggcttctaataattttatcagaaaggtggttgaaagtggtggtcctcag
gttttaaaaggccttgaacagaggttgctagaaacagttcttggctatattaatgctgta
gcacagtccatggagaaaaatgcagacaagctaactgtgaagttttggcgggcactgctt
agtaaagcttacgacatgttagataaggtcaatgccttgctgcccacggaaacctttata
gctgtgatcagagggctgctgggtaacccgctgccatctgtccgccggaaagcactggat
cttttgaacaacaagctacagcagcatacatcctggaaaaagaccattgtttatcgtttc
ctaaaactggttccagtccttttggccattgtgcagcataaaaaaaagacggaagaacaa
gcaataaacagacagacagctttatatactctaaagcttttatgtaagaattttggtgca
gaaaatccagagccttttgtccccgtgctgagcactgctgtgaaactgattgcaccagaa
acaaaagaagagaagaatgtcttgggaagtgccctgctgtgcgtggcagaggtgacctcc
accctggaggcgctggccatccctcagcttcccagcctgatgccatcattgctgacaaca
atgaaaaacaccagtgagctggtttccggtgaggtctatctgcttagtgctttggcggcc
ctgcagaaggttgtggagaccctcccacatttcatcagcccttacctagaaggtgtcctg
tcccaggtggttcatttggagaaaatcactggtggaatgggttctgcctcacaagctaat
atccgcatcacgtcccttaaaaagacactggctaccgcactgtcaccccgagtcttactg
ccagcaatcaacaaaacgtacaaacaaattgagaagaactggaagaagcacatgcgtcca
tttatgagcatcttgcaagagcacattggggtcatgaagaaggaagagctcacctcccat
caggctccactaaccgtgttttttctggaagccctggacttccgagcacagcactctgaa
gatgatctggaggaaattggaaagaccgaaaattgtatcattgactgtctagtagccatg
gtggtgaaactttctgaagtcacgttcaggcccttgttctttaaactgtttgattgggct
aaaacagaggatgccccgaaggacagacttttgacattttacaacttggcagataacatt
gctgaaaaacttaaagggctttttactctgttcgctggccacctggtgaagccttttgct
gacaccttgaaccaggtgaacatctccaaaacagatgaagcgttttttgactctgacaat
gaccctgaaaagtgctgcttgctattgcagtttattttgaactgtttatataaaatcttc
ctttttgatactcagcattttctcagtaaagagagagcagaagccttgatgatgcccctg
gtggaccagctagaaaacaggctgggaggagaagaacggttccaggagcgagtgacaaag
cacctcatcccgtgcatagcgcagttttccgtggccgtggcagacgactctctttggaaa
ccactgaactaccagattctgctgaagacgagagactcctcacccaaggttcgatttgct
gctctgattacagtattagcactggctgaaaaactaaaggagaattaccttgtcttgcta
ccagagtccattcctttcttagctgaattgatggaagatgaatgtgaagaagtggagcgt
cagtgccagaggactgtccagcagctggaggccgtactgggggagccactccagagctac
ttctaa
DBGET
integrated database retrieval system