Lynx rufus (bobcat): 124519150
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Entry
124519150 CDS
T08475
Name
(RefSeq) 28S rRNA (cytosine-C(5))-methyltransferase isoform X1
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lruf03009
]
124519150
Enzymes [BR:
lruf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
124519150
Ribosome biogenesis [BR:
lruf03009
]
Eukaryotic type
Other ribosome biogenesis factors
124519150
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NSUN5_fdxn-like
NSUN5_N
Methyltr_RsmB-F
FtsJ
Methyltransf_31
Beta-prop_NUP159_NUP214
Motif
Other DBs
NCBI-GeneID:
124519150
NCBI-ProteinID:
XP_046945142
LinkDB
All DBs
Position
Unknown
AA seq
469 aa
AA seq
DB search
MALYATAASVLAGVESRRGSIKGLVYASSFQNVKQLYALVCETQRYSSVLDAVITSAGLL
RAEKKLRPHLAKVLVYELLLGKGFKGGSGGRWKPLLDRHQARLKAELARLKVHRGVSKNE
DLLQVESKPGPASQVPRFVRVNTLKTCCDDAVDYFKRQGFSYQGRASSLEDLRALKGKCF
LLDPLLPELLVFPAQTDLHDHPLYRAGHLILQDKASCLPAVLLAPPPGSHVIDACAAPGN
KTSHLAALLKNQGKIFAFDLDAGRLASMATLLARAGVSCCELAEEDFLAISPSDQRYRQV
QYILLDPSCSGSGMATRRLEEPGAGTPSKARLQALAGFQRRALCHALTFPSLQRLVYSTC
SLCQEENEDVVRDALQQNSGTFRLVPVLPSWPHRGLGTFPGAERCLRASPETTLTGGFFV
AVLERVEAPSSVSRAEAPAPPPEAAPRRKRRRRAAAPGVPPRTEQEGKR
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggcgctctacgcgacggcagcgtccgtgctggctggcgtggagagccggcggggttcc
atcaaggggctggtgtatgccagcagcttccagaacgtgaagcagctgtacgcgctggtg
tgcgagacccagcgctactcctccgtgctggacgccgtgatcaccagcgccggcctcctc
cgcgccgagaagaagctgcggccgcacctggccaaggtactagtgtatgagttgttgctg
ggaaagggctttaaaggtggcagtgggggccgatggaaacctttgctggaccggcaccag
gcaaggctgaaggctgagttggcccggctcaaggttcatcgaggtgtgagcaagaacgag
gacctgttgcaggtggaatccaagcctggcccagcctctcaggtgcctcggtttgtgcgg
gtgaacactctgaagacctgttgtgatgatgcggttgattacttcaagagacaaggtttc
tcctaccagggccgggcttccagcctcgaggacctccgggccctcaaagggaagtgcttt
cttctggatcccttgttgccagagctgctggtgtttccggcccagacggatctgcacgac
cacccgctgtaccgggccggccacctcattctacaagacaaggccagctgtctgccggcc
gtgctgctggccccgccccccggctcccacgtcatcgatgcctgcgctgccccgggcaac
aagaccagtcacttggctgctcttctcaagaaccagggcaagatctttgcctttgacctg
gacgctgggcggctggcgtccatggctaccctgctggcccgggccggagtctcgtgctgc
gagctggccgaggaggacttcctggcgatatcgccctccgaccagcgctaccgtcaggtc
cagtacatcttgctggatccttcttgtagcggctctggtatggcgaccagacggctggag
gagcccggggcgggcacacctagcaaggcgcgcttgcaggccctggctgggttccagcgg
cgagcactgtgccacgcgctcactttcccctccctgcagcgtctggtctactccacgtgc
tccctctgccaagaggagaatgaagacgtggtgcgggacgccctgcagcagaactcgggg
accttcaggctagtccccgtcctcccctcctggccccaccgtggcctcggcacttttccg
ggggctgaacgctgcctccgggcctcccctgaaaccacgctcaccggcggcttctttgtt
gccgtacttgaacgggtggaggcgccgagctcagtctcccgggccgaagcaccggcacct
ccacccgaggccgccccgcggaggaagagacggcgcagagcggcggcccctggggtgccg
ccccgcactgagcaggaaggaaagcggtag
DBGET
integrated database retrieval system
