KEGG   Lynx rufus (bobcat): 124519209
Entry
124519209         CDS       T08475                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03030  DNA replication
lruf03410  Base excision repair
lruf03420  Nucleotide excision repair
lruf03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124519209
   03410 Base excision repair
    124519209
   03420 Nucleotide excision repair
    124519209
   03430 Mismatch repair
    124519209
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lruf03032]
    124519209
   03036 Chromosome and associated proteins [BR:lruf03036]
    124519209
   03400 DNA repair and recombination proteins [BR:lruf03400]
    124519209
DNA replication proteins [BR:lruf03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    124519209
  DNA Replication Termination Factors
   ELG1-RFC complex
    124519209
Chromosome and associated proteins [BR:lruf03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    124519209
DNA repair and recombination proteins [BR:lruf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     124519209
  Check point factors
   HRAD17(Rad24)-RFC complex
    124519209
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 AAA_22 AAA_16 AAA_14 RCF1-5-like_lid Viral_helicase1 Mg_chelatase AAA_24 AAA_11 AAA_assoc_2 DNAX_ATPase_lid Rad17 RuvB_N nSTAND3 AAA_19 AAA_5 MipZ AAA_18 AAA_28 ABC_tran AAA_25 AAA_23 AAA_30 MeaB NTPase_1 RNA_helicase bpMoxR FtsK_SpoIIIE SLFN-g3_helicase
Other DBs
NCBI-GeneID: 124519209
NCBI-ProteinID: XP_046945262
LinkDB
Position
Unknown
AA seq 352 aa
MEVRESGGGAGELGAQDPVPASGKTAGSASHYELPWVEKYRPVKLSEIVGNEDTVSRLEV
FAREGNVPNIIIAGPPGTGKTTSILCLARALLGPAFKDAVLELNASNDRGIDVVRNKIKM
FAQQKVTLPKGRHKIMILDEADSMTDGAQQALRRTMEIYSKTTRFALACNASDKIIEPIQ
SRCAVLRYTKLSDAQVLARLMTVLEQEKVQYTDDGLEAIIFTAQGDMRQALNNLQSTFSG
FGFINSENVFKVCDEPHPLLVKEMIQHCVNANIDEAYKILAHLWHLGYSPEDIIGNIFRV
CKTFQMAEYLKLEFIKEIGYTHMKIAEGVNSLLQMAGLLARLCQKTMAPVAS
NT seq 1059 nt   +upstreamnt  +downstreamnt
atggaggtgcgggagagcggcggtggcgcaggagagctgggggcccaggaccctgttccc
gcctccggcaagaccgcgggcagcgcgagccactacgagctgccgtgggttgaaaaatac
aggccagtgaagttgagtgaaattgtcggcaatgaagacactgtgagcaggctggaggtc
tttgcaagagaagggaatgtgcccaacattatcatcgctggccccccaggaacgggcaaa
actacgagcatcctgtgtttggcacgcgccctgctgggcccagcattcaaggacgccgtc
ttggagctcaacgcctcaaacgacaggggcattgatgtcgtgaggaacaaaatcaaaatg
tttgcccagcagaaagtcaccctccccaaggggcggcacaagatcatgatcctcgatgaa
gcagacagtatgaccgatggagcccagcaagccttgaggagaaccatggaaatctactcc
aaaacgactcgcttcgctcttgcttgtaacgcttcggataaaatcatagagcccattcag
tcccgctgcgcagtcctgcgctacacaaagctgagcgacgcccaggtcctggcccggctg
atgaccgtgctggagcaggagaaggtgcagtacacagacgacggcctggaagccattatc
ttcaccgcccagggagacatgaggcaggcgctcaacaacttgcagtcaactttctcggga
ttcggcttcatcaacagcgagaacgtgttcaaggtctgcgacgagccccaccccttgctg
gtgaaggagatgatccagcactgtgtgaacgccaacatcgacgaagcgtacaagattctc
gctcacctgtggcatcttggctattccccggaagacatcattggcaacatttttcgagtg
tgtaaaaccttccagatggcagaatacttgaaactggagttcatcaaggaaattggatac
actcacatgaaaattgcagaaggtgtgaactcccttctgcagatggcagggctcctggcc
aggctgtgtcagaagacaatggccccggtggccagttag

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