Lynx rufus (bobcat): 124519585
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Entry
124519585 CDS
T08475
Name
(RefSeq) DNA topoisomerase 3-alpha isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03440
Homologous recombination
lruf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
124519585
03460 Fanconi anemia pathway
124519585
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lruf03032
]
124519585
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124519585
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
124519585
DNA replication proteins [BR:
lruf03032
]
Eukaryotic type
DNA Topoisomerases
124519585
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
124519585
FA (Fanconi anemia) pathway
124519585
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
Motif
Other DBs
NCBI-GeneID:
124519585
NCBI-ProteinID:
XP_046945889
LinkDB
All DBs
Position
Unknown
AA seq
997 aa
AA seq
DB search
MIFPVARCALRWLQRPRARTLSRAAMEVALRGVRKILCVAEKNDAAKGIADLLSNGRMRR
REGLSKFNKIYEFDYHLYGQNVTMIMTSVSGHLLAHDFQMQFRKWHSCNPLVLFEAEIEK
YCPENFVDIKKTLERETRQCQALVIWTDCDREGENIGFEIIHVCRAVKPSLPVLRARFSE
ITPRAVQTACENLTEPDPRVSDAVDVRQELDLRIGAAFTRFQTLRLQRIFPEVLAEQLIS
YGSCQFPTLGFVVERFKAIQAFVPEIFHKIKVTHDHKDGVVEFNWKRHRLFNHTACLVLY
QLCMEDPRATVVEVKSKAKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYTQGYI
SYPRTETNIFPKDLNLTVLVEQQTPDPRWGAFAQSILERGGPTPRNGNKSDQAHPPIHPT
KYTSSLQGDEQRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMILARNYLDV
YPYDRWSDKTLPVYERGSRFQPSTVEMVDGETSPPQLLTEADLIALMEKHGIGTDATHAE
HIETIKARMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSKPNLRAELEADLKLICEGKK
DKLVVLRQQVQKYKQVFTEAVAKAKKLDEALSQYFGEGAEVAQQEAIYPAVPEPIKKCPQ
CNKDMVLKTKKSGGFYLSCTGFPECRSAMWFPDSVLEASRDGTVCPVCQPHPVYRLKFKF
KRGSLPPTMPLEFVGCVGGCDETLMELLDLRFSRGAPRASQPASQPSNHLQASQSLNRID
SAPRALPPPAATGESDSVTCNCGQEAVLLTVRKEGPNQGRQFYKCNGGGCNFFLWADSSP
PDAGGPPPSAPRPSGGSAGRPPGPGHRRGGFGRPGDDSGGGTSCLCSQPTVTRTVQKDGP
NKGRQFHTCAKPREQQCGFFQWADENVAPGISCFHRDQAALRCPGGFVESGGFWSLTACR
ARESGSGPLSREVPSLVDSGSPPGLLAAGAATHLPAG
NT seq
2994 nt
NT seq
+upstream
nt +downstream
nt
atgatcttccctgtcgcccgctgcgctctccgctggctgcaacggccgagagccaggacc
ttgtcccgcgctgccatggaggtggccttgcgaggcgtgcggaaaattctctgtgtggcc
gagaaaaacgacgcggccaaggggatcgccgacctgctgtccaacggtcgcatgaggcgg
agggaaggattgtctaaattcaacaagatctatgaatttgattatcatctgtacggccag
aatgttaccatgataatgacttcagtttctggacatttgctggctcatgatttccagatg
cagttccgcaaatggcacagctgcaatccccttgtcctctttgaagcagaaattgaaaag
tactgcccagagaattttgtagacatcaagaaaactctggaacgagagacccggcagtgc
caggccctggtgatctggaccgactgcgatagagaaggggaaaatatcgggttcgagatt
atccacgtgtgcagggctgtgaagcccagtctgccagtgctaagagcccgtttctctgag
atcaccccccgagccgtccagacggcctgtgagaacctgaccgagcctgatccgagagtg
agcgatgctgtggacgtgaggcaggagctggacctgaggatcggagctgccttcactagg
ttccagaccctgaggctgcagaggatttttcccgaggtgttagcggagcagctgatcagt
tacggcagctgccagttcccaaccctggggttcgtggtagagaggttcaaagccattcag
gcttttgtgccagaaatcttccacaaaattaaagtaactcatgaccacaaagatggtgtc
gtagaattcaactggaaaaggcatcgcctctttaaccacacagcttgtcttgtcctctat
cagctgtgcatggaggatcccagggcaaccgtggtagaggtcaagtctaaggcaaagagc
aagtggaggcctcaagcattggacactgtggagcttgagaagctggcttctcgaaagttg
agaataaatgctaaagaaaccatgaggattgccgaaaagctctacactcaagggtacatc
agctatcctcgaactgagacaaacatcttccccaaagacttaaacctgacggtgctcgta
gagcagcagaccccggatccacgttggggggcctttgcccagagcattctagaacggggc
ggccctactccacgcaatgggaacaagtctgaccaagctcaccctcccatccaccccacc
aaatacactagcagcttgcagggagatgagcagcgactgtatgagttcatcgttcgtcat
ttcctggcttgctgctcccaggatgctcaggggcaggagaccactgtggagatcgacatc
gctcaggaacgcttcgtggcccacggcctcatgattctggcccgaaactacctggatgtg
tacccatatgaccgctggagtgacaagaccctccccgtctacgagagaggctcccgcttt
cagcccagcactgtggagatggtggacggagagaccagtcccccccagctgctcaccgaa
gccgacctcatcgccctcatggaaaagcacggcattggtactgatgccactcatgcggag
cacatcgagaccatcaaagcccggatgtatgtcgggctcaccccggacaagcggtttctg
cccgggcatctaggcatggggcttgtggaaggctatgactccatgggctatgagatgtcc
aagcccaacctccgggctgagctggaagctgatctgaagctgatctgtgaggggaagaag
gacaagttggtggttctgaggcagcaagtccagaaatacaaacaggttttcactgaagca
gtggccaaagcaaagaaattggacgaggccttatcccagtactttggggaaggggcagag
gtggcccagcaagaagccatctacccagccgtgccagagcccatcaagaagtgcccgcag
tgcaacaaggacatggtcctcaagaccaagaagagtggcgggttctacctcagctgcacc
ggtttcccagaatgccgatcggccatgtggttccctgactctgtgctggaggccagcagg
gatgggactgtgtgtccggtttgtcagccgcaccctgtttacaggttgaagttcaagttt
aaacgcggcagccttcccccgaccatgcctctggagtttgtgggctgcgtcggaggatgt
gatgagaccctgatggagctcctggacctaagattctcacggggcgcccccagagccagc
cagccagccagccagccctctaaccacctgcaggctagccagtccctgaacagaatcgac
agcgccccccgggccctgccaccacccgctgccactggtgaaagtgactctgtgacctgc
aactgtggccaggaggctgtgctgctcaccgtccggaaagagggtcccaaccagggccgg
caattttataagtgcaacggtggcggctgcaacttcttcctgtgggccgacagcagcccc
ccggatgcaggggggccccccccctcggcaccaagaccctcaggtggctcggcaggacgc
ccgcctggcccggggcatcgccggggtgggtttggcagacctggcgatgacagcggaggg
ggcacgtcgtgcctgtgcagccagcccaccgtcacccggacggtgcagaaggacgggccc
aacaaggggcgccagttccacacatgcgccaagccaagagagcagcagtgcggcttcttc
cagtgggcggacgagaatgtggccccaggaataagctgttttcaccgggaccaggctgcc
cttcgctgccctggaggctttgtggaaagtggcggcttttggagtctcaccgcctgtcgt
gctcgggagtccggatccggaccgctgtctcgagaagtcccgtctctggtggacagtggc
tccccgcctgggcttcttgctgctggcgccgcaacgcatttaccagcagggtag
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