Lynx rufus (bobcat): 124519676
Help
Entry
124519676 CDS
T08475
Name
(RefSeq) retinoic acid-induced protein 1
KO
K19749
retinoic acid-induced protein 1
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lruf03000
]
124519676
Transcription factors [BR:
lruf03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
124519676
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-HC5HC2H
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
124519676
NCBI-ProteinID:
XP_046946043
LinkDB
All DBs
Position
Unknown
AA seq
1894 aa
AA seq
DB search
MQSFRERCGFHGKQQNYQQTSQETSRLENYRQPSQAGLSCDRQRLLAKDYYNPQPYPGYE
GGAGSAAAAATARGSKGLPSQQSLQGRPAFSGYSVQDSSPYPGRYSGEESLQAWGAPQPP
PPQPQPLPGGVGKYEDNLMKKAAVPPGRQYPEQGAQLPFRTHSLHVQQQLPQPQQPLAYP
KLQRQKLQNDMASPLPFPQGGHFPQHTQSFPASSTYSSPGQGGGGQGAHSYKSCTAPSAQ
PHDRPLTATASLAPGQRVQNLHAYQSGRLSYDQQKQQQQQQQQQQALQSRHHAQETLHYQ
NLAKYQHYGQQGPGYCQPDAAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPN
LENFPYNQQALGTGAFPAGIADHSHFMPLLNPSPTDAAGSVDSQAGNCKPLQKDKLPENL
LSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGVKNLVSRTPEQHKSQHCSPEGS
GYSAEPAGTPLSEPLSSTPQSTHAEPPEADYLSGSDDPLERSFLYCSQARGSPARVNSNS
KAKPESVSTCSVTSPDDMSTKSDDSFQSLHSSLPLDSFSKFVAGERDCPRLLLSALAQED
LASEILGLQEAIGEKADKAWAEPPGLAKDAGKPPFSLENHSACLDSVAKNAWPRPGEPEA
LPESLQLDKGGSAKDFSPGLFEDPSVGFATPDPKKTAGPLSFSSKPTLGAAVSDPAAAAF
DCFPDTTAAGSADGANPFAWPEENLGDACPRWGLHPSELTKGLEQGGKASDGVGKENAHE
ASACPVFQEEEPPGEKATVPRDSEQEEAGGVKEEVGGLLQCPEVGKADRWLEEGRHCCSA
ADFGDLPLLPPTGRKDDLEAEEEYSSLCELLGSPEQRPGMQDPLSPKAPLMCTKEEVEGV
LDTKAGWGSPCHLSGESVILLGPTVGAESKVQSWFESSLSHMKPGEEGPDGALAPGDSAT
LAPDASLAQKPNKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPVLPKDLL
LPESCTGPPQGQMEGAGAPGRGASEGLPRMCTRSFTALSEPRTPGPPGLTTTPAPPDKLG
GKQRAAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPGTPGKDQRSMI
LRSRTKTQEVFHSKRRRPSESRLPNCRATKKLLANNHLPATFKVAGSPQKEGRASQRARV
PKPGAGSKLSDRPLHSLKRKSAFMAPVPTKKRNLVLRSGGGGDVKEEGAEDSSTLFKRMS
SPKKAKPTKGNGEPAVKPPPPETPDACLKLASRAAFQGAMKTKVLPPRKGRGLKLEAIVQ
KITSPSLKKFACKTPGAPPGNPLSPSLPEKDRGFKSAGGSPVGAGEGLLNVGTGQKLPAA
SGADPLCRNPTNRSLKGKLLNSKKLSSTDCFKTEAFTSPEALLPGGTALAPKKRSRKGRA
GALGLPKGPLEKRPHLGPALLLTPRDRANGTQGGGEDSSGGGGKKPKTEELGLASQSPEG
RPCQPQTRAQKQPGHANYSSYSKRKRLTRGRAKNTTSSPCKGRAKRRRQQQVLPLDPAEP
EIRLKYISSCKRLRADSRTPAFSPFVRVEKRDAFTTICTVVNSPGEEPKPHRKPSSSASS
SSSSCSFSLDATGASLATLPGGSVLQPRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNP
ANFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPEGTCGEASPPLERTLKDLECAAAAAPGK
APRPDGPADPAKQGSLRTSARGLSRRLQSCYCCDGRGDGGEEVAPADKTRKHECSKEPPA
EPGGDTQEHWVHEACAVWTGGVYLVAGKLFGLQEAMKVAVDMTCSSCQEAGATIGCCHKG
CTHTYHYPCASDAGCIFIEENFSLKCPKHKRLPL
NT seq
5685 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacaacagaactaccagcagacc
tcacaggagacatctcgcctggagaattacagacagccgagccaggccgggctgagctgt
gaccggcagcggctgctggccaaggactattataacccgcagccgtacccgggctacgag
ggcggcgcaggctcggccgccgccgcggccaccgcgcggggcagcaaggggctcccctcc
cagcagtccctgcagggcaggccggccttctcgggctacagcgtgcaggacagcagcccg
taccccggccgctactcgggtgaggagagcctgcaggcttggggggccccccagccgccg
cccccccagccgcagcccctgccagggggggtgggcaaatatgaggacaacttgatgaaa
aaggccgcggtgccccccggcaggcagtacccagagcagggcgcccagctgccctttcgg
actcactccctgcacgtccagcagcagctgccacagccccagcagcccctggcgtacccc
aaactccaaaggcagaagctgcagaacgacatggcctcacctctgcccttcccccagggc
ggccacttcccccagcacacgcagtccttccccgcctcctccacctactcctccccgggc
cagggcggcggcgggcagggcgcccactcctacaagagctgcaccgcaccgtccgcccag
ccccacgacaggccgctgaccgccaccgccagcctggccccggggcagcgggtccagaac
cttcacgcctaccagtccggccgcctcagctacgaccaacagaagcagcagcagcagcag
cagcagcagcagcaggcccttcagagccggcaccacgcccaggaaaccctccactaccaa
aacctcgccaagtaccaacactacgggcagcaaggccctggctactgccagccggacgcg
gccgtcaggactccggagcagtactatcagaccttcagccccagctccagccactcgccc
gcacgctccgtgggccgctccccctcctacagctccaccccgtcgcccctgatgcccaac
ctggagaacttcccctacaaccagcaggcgctcggcaccggggccttccccgccggcatc
gccgaccacagccacttcatgcccctgctcaacccctccccgaccgacgccgccggctcg
gtagacagccaggctggcaactgcaagccgctgcagaaggacaagctgcctgagaacctc
ctgtcggatctcagcctgcagagcctcacggccctgacctcgcaggtggagaacatctcc
aacacggtccagcagctgctgctctccaaggcggccgtgccgcagaagaagggcgtcaag
aacctggtgtccaggaccccggaacagcacaaaagccagcactgcagccccgagggcagc
ggctactcggccgagccggcgggcacgccgctgtccgagccgctgagcagcacgccgcag
tccacgcacgccgagccgcccgaggccgactacctgagcggctccgacgatccgctggag
cgcagcttcctctactgcagccaggcccggggcagccccgccagggtcaacagcaactcg
aaggccaagcccgagtccgtgtcgacctgctccgtgacgtcgcccgacgacatgtccacc
aagtccgacgactccttccagagtctgcacagcagcctgccgctcgacagcttctccaag
ttcgtggcgggcgagcgggactgcccgcggctgctgctcagcgccctggcgcaggaggac
ctggcgtccgagatcctggggctgcaggaggccatcggcgagaaggccgacaaggcctgg
gccgagccgcccggcctggccaaggacgccggcaagccccccttctcgctggagaaccac
agcgcctgcctggactccgtggccaagaacgcgtggccgcggccaggggagccggaggcc
ctgcccgagtccttgcagctggacaagggtggcagcgccaaggacttcagcccggggctg
tttgaagacccctctgtgggcttcgccacccctgaccccaagaagacggccggtcccctc
tccttcagcagcaagcccaccctgggggccgcggtgtcggaccctgccgccgcggctttt
gactgcttcccggacacgaccgccgccggctccgcggacggcgccaacccctttgcctgg
cccgaggaaaacctgggggacgcctgtccccggtggggcctccaccccagtgagctcacc
aagggcctggagcagggcgggaaggcctcagatggcgtgggcaaggagaacgcccacgag
gcttcggcctgcccggtcttccaggaggaggagccccccggggagaaggccacggtgcct
cgggactccgagcaggaggaggcgggtggggtgaaggaggaggtgggcgggctgctgcag
tgccccgaggtgggcaaggccgacaggtggctggaggagggccggcactgctgctcagcg
gccgacttcggggacctccccctgctgccacccaccgggaggaaagacgacctggaggcc
gaggaggagtactcctccctgtgtgagctcctgggcagccccgagcagaggcccggcatg
caggacccgctgtcgccgaaggccccgctgatgtgcaccaaggaggaggtggagggggtg
ctggacaccaaggccggctggggctccccctgccacctctccggggagtctgtcattttg
ctgggcccgaccgtgggcgcggagtcgaaggtccagagttggttcgagtcctccctgtcc
cacatgaagccaggcgaagagggacccgacggggcgctggctccaggggactccgccacc
ctagccccggacgcctccctggcccagaagccgaacaagcccgctgtgcccgaggctccc
attgccaagaaagagcctgtgccgcgcggcaaaagtttacggagccggcgggtgcaccgg
gggctgcccgaggccgaggactccccgtgcagggcacctgtgctgcccaaagacctcctg
ctccccgaatcctgcacggggcccccccagggacagatggaaggagcaggggccccgggc
cggggggcctcagaagggctccccaggatgtgcacacgctccttcacggccctgagtgag
ccccgcacacctggacccccgggcctcaccaccacccccgcgcccccagacaaactgggg
ggcaagcagcgagccgccttcaagtctggcaagcgggtgggcaagccgtcacccaaggcg
gcatccagccccagtaacccggccgccctgcccgtggcctccgacagcagccccatgggc
tccaagaccaaggaaacagactcgcccggcaccccgggcaaggaccagcgctccatgatc
ctgcggtcccgcacgaaaacccaggaagtgttccactccaagagacggcggccctcagag
agccggctccccaactgccgtgccaccaagaagctcctcgccaacaaccacctgcccgcc
acgttcaaggtcgccggcagcccccagaaggagggcagggccagccagcgggcgagggtc
cccaagcccggggcaggcagcaagctctccgatcggcccctccactcactcaaaaggaag
tccgccttcatggcgcctgtccccaccaagaagcggaacctggttttgcgtagcggcggt
gggggtgacgtgaaggaggagggagccgaggactcctccaccctcttcaagaggatgtct
tcccccaagaaggccaagcccaccaagggcaacggtgagcccgccgtgaagcccccgccc
ccggagaccccggatgcctgcctgaagctcgcctcgcgggcggccttccagggggccatg
aagaccaaggtgctgccgccccggaaaggccggggcctgaagttggaggccatcgtgcag
aagatcacctcgcccagcctgaaaaagtttgcgtgcaaaacgccaggggcccctcctggt
aatcctctgagcccatctctccctgagaaggaccgagggttcaagagcgctgggggcagc
ccagttggggcaggcgaaggtctcttaaatgtgggcaccgggcagaagctcccagcagct
tcgggggccgacccgttatgcagaaatccaaccaacagatccttaaaaggcaaactcctg
aacagtaagaaactgtcctcgactgactgtttcaaaactgaggccttcacgtccccggag
gccctgttgcccggggggactgccctggcgcctaagaagagaagccggaaaggcagggcc
ggagccctcggactccctaaaggtcccctggagaagcggccccacctaggcccggctctg
ctcctgactccccgagacagggccaatggcactcaggggggcggtgaggacagctctggt
ggaggaggcaagaagccaaagacagaggagctgggcctggcctcccagtcccctgagggc
cggccctgccagccccagacaagggcgcagaagcagccgggccatgccaactacagcagc
tattccaagcgaaagcgcctcactcggggccgggccaagaacaccacctcctccccctgt
aaggggcgtgccaagcggcggcggcagcagcaggtgctgcccctggatcccgcagagcct
gaaatccgcctcaagtacatttcctcctgcaagcggcttcgagcggacagccgcaccccg
gccttctcgccctttgtgcgggtggagaagagagacgcgttcaccaccatatgcactgtt
gtcaactccccgggggaggagcccaagccccacaggaagccttcctcctctgcctcctct
tcctcatcctcgtgctcattctccttggatgcgaccggggcctccctggccacgctccct
ggaggctctgtcctgcagccacgcccctccctgcccctgtcctccaccatgcatctgggg
cccgtggtttccaaggccctgagtacctcttgccttgtttgctgcctctgccaaaacccg
gccaacttcaaggacctcggggacctctgtgggccctactaccccgaacactgcctcccc
aaaaagaagccaaaactcaaggagaaggtgcggccggagggcacctgtggggaggcctcg
ccgcccctcgagagaacactcaaagaccttgaatgtgcagctgccgctgcccctggaaaa
gccccgaggcccgacggcccggccgaccccgccaagcagggctccctgcgcaccagcgcc
cggggcctgtcccggcggctgcagagctgttactgctgcgacggtcggggggatgggggc
gaggaggtggccccagctgacaagacccgcaagcatgagtgcagcaaggagccgccggca
gagcccggcggggacacccaggagcactgggtgcacgaggcctgcgccgtgtggacgggc
ggggtctacctggtagccgggaagctctttgggctgcaggaggccatgaaggtggccgtg
gacatgacctgttccagctgccaagaagccggggccaccatcgggtgctgtcacaaggga
tgcacccacacctaccattacccgtgtgccagcgatgcgggttgcatattcatcgaagag
aacttttctttgaagtgtcccaaacataagaggctgccgttgtaa
DBGET
integrated database retrieval system