KEGG   Lynx rufus (bobcat): 124519676
Entry
124519676         CDS       T08475                                 
Name
(RefSeq) retinoic acid-induced protein 1
  KO
K19749  retinoic acid-induced protein 1
Organism
lruf  Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lruf03000]
    124519676
Transcription factors [BR:lruf03000]
 Eukaryotic type
  Zinc finger
   Other zinc fingers
    124519676
SSDB
Motif
Pfam: zf-HC5HC2H zf-HC5HC2H_2
Other DBs
NCBI-GeneID: 124519676
NCBI-ProteinID: XP_046946043
LinkDB
Position
Unknown
AA seq 1894 aa
MQSFRERCGFHGKQQNYQQTSQETSRLENYRQPSQAGLSCDRQRLLAKDYYNPQPYPGYE
GGAGSAAAAATARGSKGLPSQQSLQGRPAFSGYSVQDSSPYPGRYSGEESLQAWGAPQPP
PPQPQPLPGGVGKYEDNLMKKAAVPPGRQYPEQGAQLPFRTHSLHVQQQLPQPQQPLAYP
KLQRQKLQNDMASPLPFPQGGHFPQHTQSFPASSTYSSPGQGGGGQGAHSYKSCTAPSAQ
PHDRPLTATASLAPGQRVQNLHAYQSGRLSYDQQKQQQQQQQQQQALQSRHHAQETLHYQ
NLAKYQHYGQQGPGYCQPDAAVRTPEQYYQTFSPSSSHSPARSVGRSPSYSSTPSPLMPN
LENFPYNQQALGTGAFPAGIADHSHFMPLLNPSPTDAAGSVDSQAGNCKPLQKDKLPENL
LSDLSLQSLTALTSQVENISNTVQQLLLSKAAVPQKKGVKNLVSRTPEQHKSQHCSPEGS
GYSAEPAGTPLSEPLSSTPQSTHAEPPEADYLSGSDDPLERSFLYCSQARGSPARVNSNS
KAKPESVSTCSVTSPDDMSTKSDDSFQSLHSSLPLDSFSKFVAGERDCPRLLLSALAQED
LASEILGLQEAIGEKADKAWAEPPGLAKDAGKPPFSLENHSACLDSVAKNAWPRPGEPEA
LPESLQLDKGGSAKDFSPGLFEDPSVGFATPDPKKTAGPLSFSSKPTLGAAVSDPAAAAF
DCFPDTTAAGSADGANPFAWPEENLGDACPRWGLHPSELTKGLEQGGKASDGVGKENAHE
ASACPVFQEEEPPGEKATVPRDSEQEEAGGVKEEVGGLLQCPEVGKADRWLEEGRHCCSA
ADFGDLPLLPPTGRKDDLEAEEEYSSLCELLGSPEQRPGMQDPLSPKAPLMCTKEEVEGV
LDTKAGWGSPCHLSGESVILLGPTVGAESKVQSWFESSLSHMKPGEEGPDGALAPGDSAT
LAPDASLAQKPNKPAVPEAPIAKKEPVPRGKSLRSRRVHRGLPEAEDSPCRAPVLPKDLL
LPESCTGPPQGQMEGAGAPGRGASEGLPRMCTRSFTALSEPRTPGPPGLTTTPAPPDKLG
GKQRAAFKSGKRVGKPSPKAASSPSNPAALPVASDSSPMGSKTKETDSPGTPGKDQRSMI
LRSRTKTQEVFHSKRRRPSESRLPNCRATKKLLANNHLPATFKVAGSPQKEGRASQRARV
PKPGAGSKLSDRPLHSLKRKSAFMAPVPTKKRNLVLRSGGGGDVKEEGAEDSSTLFKRMS
SPKKAKPTKGNGEPAVKPPPPETPDACLKLASRAAFQGAMKTKVLPPRKGRGLKLEAIVQ
KITSPSLKKFACKTPGAPPGNPLSPSLPEKDRGFKSAGGSPVGAGEGLLNVGTGQKLPAA
SGADPLCRNPTNRSLKGKLLNSKKLSSTDCFKTEAFTSPEALLPGGTALAPKKRSRKGRA
GALGLPKGPLEKRPHLGPALLLTPRDRANGTQGGGEDSSGGGGKKPKTEELGLASQSPEG
RPCQPQTRAQKQPGHANYSSYSKRKRLTRGRAKNTTSSPCKGRAKRRRQQQVLPLDPAEP
EIRLKYISSCKRLRADSRTPAFSPFVRVEKRDAFTTICTVVNSPGEEPKPHRKPSSSASS
SSSSCSFSLDATGASLATLPGGSVLQPRPSLPLSSTMHLGPVVSKALSTSCLVCCLCQNP
ANFKDLGDLCGPYYPEHCLPKKKPKLKEKVRPEGTCGEASPPLERTLKDLECAAAAAPGK
APRPDGPADPAKQGSLRTSARGLSRRLQSCYCCDGRGDGGEEVAPADKTRKHECSKEPPA
EPGGDTQEHWVHEACAVWTGGVYLVAGKLFGLQEAMKVAVDMTCSSCQEAGATIGCCHKG
CTHTYHYPCASDAGCIFIEENFSLKCPKHKRLPL
NT seq 5685 nt   +upstreamnt  +downstreamnt
atgcagtcttttcgagaaaggtgtggtttccatggcaaacaacagaactaccagcagacc
tcacaggagacatctcgcctggagaattacagacagccgagccaggccgggctgagctgt
gaccggcagcggctgctggccaaggactattataacccgcagccgtacccgggctacgag
ggcggcgcaggctcggccgccgccgcggccaccgcgcggggcagcaaggggctcccctcc
cagcagtccctgcagggcaggccggccttctcgggctacagcgtgcaggacagcagcccg
taccccggccgctactcgggtgaggagagcctgcaggcttggggggccccccagccgccg
cccccccagccgcagcccctgccagggggggtgggcaaatatgaggacaacttgatgaaa
aaggccgcggtgccccccggcaggcagtacccagagcagggcgcccagctgccctttcgg
actcactccctgcacgtccagcagcagctgccacagccccagcagcccctggcgtacccc
aaactccaaaggcagaagctgcagaacgacatggcctcacctctgcccttcccccagggc
ggccacttcccccagcacacgcagtccttccccgcctcctccacctactcctccccgggc
cagggcggcggcgggcagggcgcccactcctacaagagctgcaccgcaccgtccgcccag
ccccacgacaggccgctgaccgccaccgccagcctggccccggggcagcgggtccagaac
cttcacgcctaccagtccggccgcctcagctacgaccaacagaagcagcagcagcagcag
cagcagcagcagcaggcccttcagagccggcaccacgcccaggaaaccctccactaccaa
aacctcgccaagtaccaacactacgggcagcaaggccctggctactgccagccggacgcg
gccgtcaggactccggagcagtactatcagaccttcagccccagctccagccactcgccc
gcacgctccgtgggccgctccccctcctacagctccaccccgtcgcccctgatgcccaac
ctggagaacttcccctacaaccagcaggcgctcggcaccggggccttccccgccggcatc
gccgaccacagccacttcatgcccctgctcaacccctccccgaccgacgccgccggctcg
gtagacagccaggctggcaactgcaagccgctgcagaaggacaagctgcctgagaacctc
ctgtcggatctcagcctgcagagcctcacggccctgacctcgcaggtggagaacatctcc
aacacggtccagcagctgctgctctccaaggcggccgtgccgcagaagaagggcgtcaag
aacctggtgtccaggaccccggaacagcacaaaagccagcactgcagccccgagggcagc
ggctactcggccgagccggcgggcacgccgctgtccgagccgctgagcagcacgccgcag
tccacgcacgccgagccgcccgaggccgactacctgagcggctccgacgatccgctggag
cgcagcttcctctactgcagccaggcccggggcagccccgccagggtcaacagcaactcg
aaggccaagcccgagtccgtgtcgacctgctccgtgacgtcgcccgacgacatgtccacc
aagtccgacgactccttccagagtctgcacagcagcctgccgctcgacagcttctccaag
ttcgtggcgggcgagcgggactgcccgcggctgctgctcagcgccctggcgcaggaggac
ctggcgtccgagatcctggggctgcaggaggccatcggcgagaaggccgacaaggcctgg
gccgagccgcccggcctggccaaggacgccggcaagccccccttctcgctggagaaccac
agcgcctgcctggactccgtggccaagaacgcgtggccgcggccaggggagccggaggcc
ctgcccgagtccttgcagctggacaagggtggcagcgccaaggacttcagcccggggctg
tttgaagacccctctgtgggcttcgccacccctgaccccaagaagacggccggtcccctc
tccttcagcagcaagcccaccctgggggccgcggtgtcggaccctgccgccgcggctttt
gactgcttcccggacacgaccgccgccggctccgcggacggcgccaacccctttgcctgg
cccgaggaaaacctgggggacgcctgtccccggtggggcctccaccccagtgagctcacc
aagggcctggagcagggcgggaaggcctcagatggcgtgggcaaggagaacgcccacgag
gcttcggcctgcccggtcttccaggaggaggagccccccggggagaaggccacggtgcct
cgggactccgagcaggaggaggcgggtggggtgaaggaggaggtgggcgggctgctgcag
tgccccgaggtgggcaaggccgacaggtggctggaggagggccggcactgctgctcagcg
gccgacttcggggacctccccctgctgccacccaccgggaggaaagacgacctggaggcc
gaggaggagtactcctccctgtgtgagctcctgggcagccccgagcagaggcccggcatg
caggacccgctgtcgccgaaggccccgctgatgtgcaccaaggaggaggtggagggggtg
ctggacaccaaggccggctggggctccccctgccacctctccggggagtctgtcattttg
ctgggcccgaccgtgggcgcggagtcgaaggtccagagttggttcgagtcctccctgtcc
cacatgaagccaggcgaagagggacccgacggggcgctggctccaggggactccgccacc
ctagccccggacgcctccctggcccagaagccgaacaagcccgctgtgcccgaggctccc
attgccaagaaagagcctgtgccgcgcggcaaaagtttacggagccggcgggtgcaccgg
gggctgcccgaggccgaggactccccgtgcagggcacctgtgctgcccaaagacctcctg
ctccccgaatcctgcacggggcccccccagggacagatggaaggagcaggggccccgggc
cggggggcctcagaagggctccccaggatgtgcacacgctccttcacggccctgagtgag
ccccgcacacctggacccccgggcctcaccaccacccccgcgcccccagacaaactgggg
ggcaagcagcgagccgccttcaagtctggcaagcgggtgggcaagccgtcacccaaggcg
gcatccagccccagtaacccggccgccctgcccgtggcctccgacagcagccccatgggc
tccaagaccaaggaaacagactcgcccggcaccccgggcaaggaccagcgctccatgatc
ctgcggtcccgcacgaaaacccaggaagtgttccactccaagagacggcggccctcagag
agccggctccccaactgccgtgccaccaagaagctcctcgccaacaaccacctgcccgcc
acgttcaaggtcgccggcagcccccagaaggagggcagggccagccagcgggcgagggtc
cccaagcccggggcaggcagcaagctctccgatcggcccctccactcactcaaaaggaag
tccgccttcatggcgcctgtccccaccaagaagcggaacctggttttgcgtagcggcggt
gggggtgacgtgaaggaggagggagccgaggactcctccaccctcttcaagaggatgtct
tcccccaagaaggccaagcccaccaagggcaacggtgagcccgccgtgaagcccccgccc
ccggagaccccggatgcctgcctgaagctcgcctcgcgggcggccttccagggggccatg
aagaccaaggtgctgccgccccggaaaggccggggcctgaagttggaggccatcgtgcag
aagatcacctcgcccagcctgaaaaagtttgcgtgcaaaacgccaggggcccctcctggt
aatcctctgagcccatctctccctgagaaggaccgagggttcaagagcgctgggggcagc
ccagttggggcaggcgaaggtctcttaaatgtgggcaccgggcagaagctcccagcagct
tcgggggccgacccgttatgcagaaatccaaccaacagatccttaaaaggcaaactcctg
aacagtaagaaactgtcctcgactgactgtttcaaaactgaggccttcacgtccccggag
gccctgttgcccggggggactgccctggcgcctaagaagagaagccggaaaggcagggcc
ggagccctcggactccctaaaggtcccctggagaagcggccccacctaggcccggctctg
ctcctgactccccgagacagggccaatggcactcaggggggcggtgaggacagctctggt
ggaggaggcaagaagccaaagacagaggagctgggcctggcctcccagtcccctgagggc
cggccctgccagccccagacaagggcgcagaagcagccgggccatgccaactacagcagc
tattccaagcgaaagcgcctcactcggggccgggccaagaacaccacctcctccccctgt
aaggggcgtgccaagcggcggcggcagcagcaggtgctgcccctggatcccgcagagcct
gaaatccgcctcaagtacatttcctcctgcaagcggcttcgagcggacagccgcaccccg
gccttctcgccctttgtgcgggtggagaagagagacgcgttcaccaccatatgcactgtt
gtcaactccccgggggaggagcccaagccccacaggaagccttcctcctctgcctcctct
tcctcatcctcgtgctcattctccttggatgcgaccggggcctccctggccacgctccct
ggaggctctgtcctgcagccacgcccctccctgcccctgtcctccaccatgcatctgggg
cccgtggtttccaaggccctgagtacctcttgccttgtttgctgcctctgccaaaacccg
gccaacttcaaggacctcggggacctctgtgggccctactaccccgaacactgcctcccc
aaaaagaagccaaaactcaaggagaaggtgcggccggagggcacctgtggggaggcctcg
ccgcccctcgagagaacactcaaagaccttgaatgtgcagctgccgctgcccctggaaaa
gccccgaggcccgacggcccggccgaccccgccaagcagggctccctgcgcaccagcgcc
cggggcctgtcccggcggctgcagagctgttactgctgcgacggtcggggggatgggggc
gaggaggtggccccagctgacaagacccgcaagcatgagtgcagcaaggagccgccggca
gagcccggcggggacacccaggagcactgggtgcacgaggcctgcgccgtgtggacgggc
ggggtctacctggtagccgggaagctctttgggctgcaggaggccatgaaggtggccgtg
gacatgacctgttccagctgccaagaagccggggccaccatcgggtgctgtcacaaggga
tgcacccacacctaccattacccgtgtgccagcgatgcgggttgcatattcatcgaagag
aacttttctttgaagtgtcccaaacataagaggctgccgttgtaa

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