Lynx rufus (bobcat): 124519848
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Entry
124519848 CDS
T08475
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03082
ATP-dependent chromatin remodeling
lruf03250
Viral life cycle - HIV-1
lruf04714
Thermogenesis
lruf05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124519848
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
124519848
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
124519848
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
124519848
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lruf01009
]
124519848
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lruf03021
]
124519848
03036 Chromosome and associated proteins [BR:
lruf03036
]
124519848
Protein phosphatases and associated proteins [BR:
lruf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
124519848
Transcription machinery [BR:
lruf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124519848
SWI/SNF complex
124519848
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124519848
PBAF complex
124519848
SWI/SNF complex
124519848
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
124519848
NCBI-ProteinID:
XP_046946241
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagaccttcgggcagaagcccgtcaagttccagctagaa
gacgacggagaattctacatgatcggctctgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcactctggaggcgactagccactgtggaagagagg
aagaaaatagttgcatcgtcacatggtaaaaaaacaaaacctaacactaaggatcatgga
tacacaaccctggccaccagcgtgacgctgttaaaagcttcagaggtggaagagattctg
gacggcaatgatgagaagtacaaggccgtctccatcagcacggaaccccccacctacctc
agggaacagaaagccaagaggaacagccaatgggtgcccaccctgcccaatagctcccac
catctggatgctgtgccctgctccacgaccatcaacaggaaccgcatgggccgggacaag
aagagaaccttccctctgtgctttgatgaccacgacccagctgtgatccatgagaatgcc
tcccagcctgaagtgctggtccctatccggctggacatggagatcgacgggcagaagctg
cgagatgcctttacttggaacatgaatgagaagctgatgactcctgagatgttttcagaa
atcctctgtgatgacctggatttgaaccctctgacatttgtgccagccatcgcctctgcc
atcaggcagcagatagagtcctaccccacagacagcatcttggaggaccagtcagaccag
cgtgtcatcatcaagctgaatatccacgtgggaaacatttcgctggtggaccagtttgag
tgggacatgtcagagaaggagaactcaccagagaaatttgccctgaagctgtgctcagag
ctggggctgggcggggagtttgtcaccaccatcgcatacagcattcggggacagctgagc
tggcatcagaagacctatgccttcagtgagaaccccctacccacggtggagattgccatc
cggaacacaggcgatgctgaccaatggtgcccactgctggagactctgacagacgctgag
atggaaaagaagatccgagaccaggacaggaacacaaggcgtatgaggcgtcttgccaac
actgccccagcttggtaa
DBGET
integrated database retrieval system
