Lynx rufus (bobcat): 124519858
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Entry
124519858 CDS
T08475
Name
(RefSeq) LOW QUALITY PROTEIN: laminin subunit alpha-1-like
KO
K05637
laminin, alpha 1/2
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04151
PI3K-Akt signaling pathway
lruf04510
Focal adhesion
lruf04512
ECM-receptor interaction
lruf04820
Cytoskeleton in muscle cells
lruf05145
Toxoplasmosis
lruf05146
Amoebiasis
lruf05165
Human papillomavirus infection
lruf05200
Pathways in cancer
lruf05222
Small cell lung cancer
lruf05410
Hypertrophic cardiomyopathy
lruf05412
Arrhythmogenic right ventricular cardiomyopathy
lruf05414
Dilated cardiomyopathy
lruf05416
Viral myocarditis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124519858
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124519858
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124519858
09142 Cell motility
04820 Cytoskeleton in muscle cells
124519858
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124519858
09162 Cancer: specific types
05222 Small cell lung cancer
124519858
09172 Infectious disease: viral
05165 Human papillomavirus infection
124519858
09174 Infectious disease: parasitic
05146 Amoebiasis
124519858
05145 Toxoplasmosis
124519858
09166 Cardiovascular disease
05410 Hypertrophic cardiomyopathy
124519858
05412 Arrhythmogenic right ventricular cardiomyopathy
124519858
05414 Dilated cardiomyopathy
124519858
05416 Viral myocarditis
124519858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_1
Laminin_EGF
Laminin_G_2
Laminin_B
Laminin_N
Laminin_I
Laminin_II
Laminin_G_3
HAD_2
DUF5994
Motif
Other DBs
NCBI-GeneID:
124519858
NCBI-ProteinID:
XP_046946268
LinkDB
All DBs
Position
Unknown
AA seq
3097 aa
AA seq
DB search
MNTSPPPRSYNEHFTLSLPPVSHLYPSTQLIFDAFQRLFPAILNLASNAHISTNATCGER
GPEMSCKLVEHVPGRPVRNAQCRICDADSANPKERHPISHAIDGTNNWWQSPSIQNGREY
HWVTITLDLRQVFQVAYVIIKAANAPRPGNWILERSLDGTKFSPWQYYAVSDTECLTRYN
ITPRRGPPTYRADDEVICTSYYSRLVPLEHGEIHTSLINGRPSADDLSPKLLEFTSARYI
RLRLQRIRTLNADLMTLSHRDPKDLDPIVTRRYYYSIKDISVGGMCICYGHASSCPWDET
TKKLQCQCEHNTCGESCNRCCPGYHQQPWRPGTISSGNTCEKCNCHNKAQDCYYDGNVAN
QRRSLNTAGQFRGGGVCISCLQNTMGINCETCIDGYYRPHDVSPYDDNPCRPCDCDPFGS
LSSVCIKDKPQSGLHKGKWPGQCPCKEGYAGEKCDHCQFGYKAYPACVRCECSRAGSVNE
DPCSEPCLCKENVEGENCDLCKPGFYNLKERNPEGCSECFCFGVSDVCDSLSWSISQVKD
MSGWLVTDLISPSRIPSQQDALGGRHQISINNTVATQRLTSKYYWSAPEAYLGNKLTAFG
GFLKYTVSYDIPVETVDGDLMSHTDVIIKGNGLTLSTQAEGLSLQPYEEYLNVVRLVPEN
FRDFNNKKEIDRDQLMTVLANVTHLLIRANYNSAKMALYRLDSVSLDTASPNVIDLALAT
EVEHCECPQGYAGISCESCLPGYYRVDGILFGGICQPCECHGHATECDIHGVCFACKHNT
TGDHCEQCAPGFYGLPSRGTPRDCQQCACPLSTASNNFSPTCHLENGDEVVCDQCAPGYS
GAWCERCADGYYGNPTVPGESCVPCDCSGNVDPLEAGHCDSVTGECLKCIGNTAGAHCER
CADGFYGDAVTAKNCRACECHGKGSLSGVCHLETGVCDCKPHVTGQQCDRCSHGYYGLDT
GLGCLPCNCSTPGSLSDDCTEEGRCHCVPGVAGEKCDRCARGFYAFQDGGCTPCDCAHTQ
HTCHPESGQCICPPHTRGASCDKCEDGYWGRDPELGCQACNCSAVGSASHQCDVLTGRCQ
CKPAFGGPSCHQCSLGYRDFPDCVPCDCDPRGTSADTCDEEQSLCSCAEETGICSCKENV
FGLQCSECRAGTYALRADDPLGCTPCFCFGLSQVCSELEGYVRTPITLGSGQPLLRVVSQ
SNLRGTTQGVYYQAPDVLLDAVTVRQHIHTEPFYWRLPERFQGDQLLAYGGRLKYSVAFY
SSNGMGTFNLEPQVLIKGGRTRKQVIYVDVPAPENGVRQDQEVGMKENFWRYFNSVSEKP
VTRSDFMSVLSNIEYILIKASYGQGLQQSRISNISMEVGKKADKLRPGQKAASRLEKCVC
PPGTAGFSCQDCAPGYHRGELPQGGGRGPRPLLAPCVPCNCNNHSDACDPETGKCLNCSH
STTGDHCDLCAPGYFGKVTGSASDCSVCACPRSHPASFSPTCVLEGDHDFRCDACILGYE
GQYCERCSSGYHGNPRALGGTCQRCDCSPSGSVHGDCDRRSGQCVCRPGATGLRCEECEP
RHILLESDCVSCDDECVGVLLNDLDNIGDAILSVNLTGVIPVPSGILSNLENTTKYLREA
LLKENTRRDLVEDQLEDVAKQTDHLLRELTRVLMSSQHVTRATEGILDKSQDLMTFTEKL
QRTIQEIIEKAATLNQTLDEDFQLPSSTLQNMQKNITSLLEVIQKRHFVQLQQKAILELK
AAEDLLSQIQNNYQKPQKELEVLKEAASSLLSKRSSELQAARDLVREAEVKNQESDRLLH
IVSANLREFNDKTVRVQQEQNLTSTLIARGRRLLDAVTAPADAVGDALAQLERHRDELLL
WTAKIRRHVDDLVMQMSQRRALDLVYRAEDHAAELQRLAGALDSGLGSVRHVSLNATSAT
HVHSNIRSMIEESEKVAKDALKIVTTASLFSESLAPNGKVALQRSSRFLKEGNSLSRKHQ
GITLELSKLKNTANRFQENAHTITRRTNESLSILRAFPEGVRDKGAKIKELASSANRSAA
STLKKVVGLSKELLNTSTGLSRVNAALQETNTLLQDSSMTTLLAGRRVKDAETQASLLFD
RLKPLKILEENLSRNLSEIKLLISQARKQAASIKVAVSADRDCVRAYQPQISSTNYNTLT
LNVKTSEPDNLLFYLGSSTSSDFLAVEMRRGKVAFLWDMGSGSTRLEFPDFRADDNKWHS
IYVTRFGNIGSLSVKEMSATQKPSTKTSKSPGTAKVLDINNSTLMFVGGLGGQIKKSPAV
KVTHFKGCMGEAFLNGQSIGLWNYVEREGKCHGCFGSPQNEDSSFHFDGSGYSVVEKTLR
ATVTQIIMLFSTFSPNGLLLYLASNGTKDFVSIELVRGRVRVTVDLGSGPLALITDRRYN
NGTWYKIAFQRNRKQGLLAVIDAYNTSYKETKQGETPGASSDLNRLDKDPIYVGGLPRSR
IVRKGVTSKSYVGCIKNLEISRSTFDLLRNSYGVRKGCILEPIRTVSFLKGGYVELSPRS
LLPESELLATFATKNSSGIILAALGRHGEKQGHRQAHGQPSQPFFSIMLIEGHIEVHVNS
GDGANLRRAVLRAPKGTYGDGQEHSISLMRTGSVITVQMDETNPVEMKLGPSAESRTINV
SSLYIGGVPEGEGTSVLKMGRSFHGCIKNLIFNMEHLDFTSAVGYEQVDLDTCLLSERPK
LALHGEDSELPPEPQPLPSLGQCAVDRAPEYIPNAHQFGLMQSSHFVLPFNQLAVRKRLS
VQLSIRTFASSGLIYYMAHQNQVDYATLQLHGGHLHFMFDLGKGRTKVSHPAVISDGRWH
TVKTEHFKRKGFMTVDGQESPTVTAVGDGTMLDVEGKLYLGGLPSEYRARNIGNITHSVP
ACIGEVILNGKQLDKSSPVSAFAVSRCYAVAQEGTFFEGSGYAALVKEGYKVRSDVNITL
EFRTTSENGVLLGISSAKVDAIGLEIVNGKILFHVNNGAGRITATYKPKATSTLCDGRWH
TLQAQKSKHRLVLIVDGNAAHAESPHTQSTSADTNNPIYVGGYPADVKQNCLSSQTSFRG
CLRKLTLIKGPQVQSYDFSRAFDLQGVFPHSCPGSEP
NT seq
9294 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctctcctccacccagatcctacaatgaacattttactctttctctaccacct
gtatcccatctctatccatcaacccagctcatttttgatgcatttcaaaggctgtttcct
gccattctcaatcttgccagcaacgcgcacatcagcaccaacgccacctgtggagagcgg
gggcccgagatgtcctgcaagcttgtggagcacgtgcccggtcgacccgtgcgcaacgca
cagtgccggatctgcgacgcagacagcgccaaccccaaagaacgccacccaatatcacat
gcaatcgatgggaccaacaactggtggcaaagccccagtattcaaaacgggagagaatat
cactgggtcacaatcactctggacttaagacaggtctttcaagttgcctacgtcatcatc
aaagctgctaatgcccctcgacccggaaactggattttggagcgttctctggatggcacc
aagttcagcccctggcagtactatgcagtcagtgacacggagtgtttgacccgttacaat
atcactccaagacgggggccacccacttacagggctgatgatgaagtgatctgcacctcc
tactattccagactggtgccgcttgagcacggagagattcatacatcgctaatcaacggc
agaccgagcgctgatgatctctcacccaagctgttggagtttacttccgcacgatatatc
cgccttcgcttacagcgtatcagaaccctcaatgccgatcttatgaccctcagccaccga
gaccctaaagacctcgatcctattgttacaagacgatattactattcaatcaaagacatt
tctgttggcggaatgtgtatttgttatggccatgccagtagctgcccatgggatgaaact
acaaagaagcttcagtgtcagtgtgaacataacacctgtggagagagctgcaataggtgt
tgtccgggataccaccagcagccgtggcggcccggcaccatttcttccggtaacacgtgt
gaaaagtgtaattgtcacaataaagcccaagactgttactacgatggaaatgttgcaaat
cagaggagaagcttgaataccgcgggacagttcagaggaggcggggtgtgcatcagctgc
ctgcagaacaccatgggaatcaactgtgaaacctgtatcgatggatattacagaccacac
gacgtatctccttatgatgacaacccttgtcgtccctgtgactgtgacccttttgggtcc
ctcagttctgtctgtattaaggataagcctcaatccggcttacacaaagggaagtggcca
ggtcaatgtccatgcaaggaaggctacgcaggagaaaaatgtgatcactgccaatttggt
tataaggcttacccagcctgtgtccgctgtgagtgtagccgggctggcagtgtgaacgag
gacccatgctcagagccctgtctctgcaaggaaaatgttgaaggggaaaattgtgacctc
tgcaagccaggattctataacttgaaggagagaaaccctgagggctgctcggagtgcttc
tgctttggcgtttctgatgtctgcgacagcctttcttggtccatcagtcaggtgaaagac
atgtctgggtggcttgtcaccgacctgatcagtccgagcaggatcccatctcagcaagac
gcactaggtgggcgtcatcagattagcatcaacaacacggtggccacgcagaggctgact
tccaagtattactggtcggcaccagaggcctacctcggaaataagctgactgctttcggt
ggattcctgaagtacacagtgtcctatgatattccagtggagacagtggatggcgacctc
atgtcgcacaccgatgtcatcatcaagggaaatggactcactttaagcacccaggccgag
ggcctgtcattacagccctatgaagagtatttaaatgtggtcagacttgtgccagagaac
ttccgagattttaataacaaaaaggagatagatcgtgaccaactgatgactgtccttgcc
aatgtgacacatctcctgatcagagccaactataattctgcaaaaatggctctttacagg
ttggattctgtctctttggacacagccagccctaacgttatagacctggcactggccacg
gaggtggagcactgcgaatgtccccaaggctatgcagggatctcctgtgagtcctgtctc
cctggctattatcgtgtggatggaatactctttggaggaatttgtcaaccctgtgaatgc
catggccatgcaactgaatgcgatatccacggcgtttgctttgcgtgcaagcacaacacc
accggggaccactgtgagcagtgcgcgcccggcttctacgggctgccttcccgagggact
cctagggactgccagcagtgtgcctgccccctctccacagcctccaacaatttcagcccc
acctgccacctagaaaatggggacgaagtggtctgtgaccagtgtgcaccgggatactcg
ggagcttggtgcgagagatgcgcagacggttactatggaaacccaacagtgcccggggaa
tcctgtgttccctgcgactgcagcggcaatgtggatcccttagaggccggtcactgtgac
tccgtcaccggagagtgcctgaaatgcattgggaacacggctggtgcccactgtgagagg
tgtgcagacggcttctatggggatgccgtgactgctaaaaattgccgcgcctgtgaatgc
catggaaaaggctccctttctggtgtctgccatctggagactggagtctgtgactgcaaa
ccgcatgtgactggacagcagtgtgaccggtgctcgcatggctattatgggctggacaca
gggcttgggtgcttgccctgtaactgcagcacgccaggctccctgtcggatgactgcacg
gaggaaggccgatgtcactgtgtgccaggtgtggctggggaaaagtgcgacaggtgtgca
cgtggcttctatgcattccaggacggcggctgtacaccctgtgactgcgcccacacgcag
cacacttgtcacccggaatcggggcagtgcatctgccctcctcatactcggggcgcatcc
tgtgacaaatgtgaggacggatactggggccgcgacccagagctcggatgccaggcctgc
aattgcagtgctgttgggtcagccagtcatcagtgcgatgtgctcactggccgttgccaa
tgtaagccagcgttcggtggaccgagctgccaccagtgctccctggggtacagagacttt
ccagactgcgtgccctgtgactgtgacccaagagggacctcggcagacacctgtgatgag
gaacagagtctttgcagctgtgcagaggaaaccggtatctgctcttgcaaggaaaatgtg
tttggcctgcagtgcagcgagtgtcgagccggcacctatgctctccgcgccgacgaccct
ctggggtgcaccccctgcttctgcttcgggctgtcacaagtctgctcagagctcgagggt
tatgtgaggaccccgataacgctgggctcgggtcagccgctcctgcgtgtggtttctcag
agcaacctcaggggcacgacccagggggtgtattaccaggctcctgatgtcctcctggac
gccgtgactgtcaggcagcatattcacacggagccgttctactggagactgccagagcgg
ttccagggagaccagctcctggcctacggtggcagactgaagtacagtgtggccttctat
tcttccaatggcatgggcaccttcaatcttgaaccccaagtgctcatcaaaggaggccgg
accagaaagcaagtcatctacgtggatgtgccagccccggagaatggagtgcgacaagac
caagaagtggggatgaaagagaatttttggagatattttaactctgtttctgaaaaacct
gtcacacgctccgattttatgtctgttcttagcaacattgagtacatcctcatcaaagca
tcttatggtcagggattacagcaaagcagaatctcaaatatttccatggaggttggcaaa
aaggcggacaagttgcggccgggacagaaggcggcatcccgtttagagaagtgtgtctgt
cctcctggcacggctgggttctcctgtcaggactgcgcacctggttaccacagaggggag
ctgccgcaaggtggtggccgaggaccccgccctctgctcgctccttgtgtgccctgcaat
tgcaacaaccacagcgatgcctgtgaccctgaaactgggaagtgcctgaactgcagccat
agcaccactggtgaccactgtgacttgtgtgctcctgggtacttcgggaaggtgactggc
tcagccagcgactgctctgtgtgcgcctgtcctcgcagccaccctgccagttttagtccc
acttgtgtcttggaaggtgatcacgatttccgctgtgatgcctgcattctgggctacgaa
ggacagtactgcgaaaggtgctcctcaggctatcacgggaaccctcgagcgctgggtggc
acttgccagcggtgtgactgcagccccagtggctctgtccacggtgactgtgaccgcagg
tctgggcagtgtgtctgcaggccaggcgccacagggctccgatgcgaggaatgtgaaccg
aggcacattctgctggaaagcgattgtgtttcttgtgatgatgaatgtgtgggtgtgctg
ctaaatgacttagataatattggggacgccatcctttccgtgaacctcactggcgttatc
cctgtcccatctggaattttgtcaaacctggaaaatacaacgaaatatctccgggaagct
ttattaaaagaaaatacacgtagggacctggtagaagatcagcttgaagatgttgcaaaa
caaacagaccacctgctaagggagctcactagagtgttaatgagtagccaacatgtaacc
agggcgactgaaggaatccttgacaagagccaagacctcatgacatttactgagaagctg
cagagaactatccaagagattattgaaaaagcagcaactctaaatcagaccttggatgaa
gacttccaactacccagttctactcttcagaatatgcaaaagaatattacatctttgcta
gaagtcatacagaaaaggcatttcgtgcagttgcaacagaaagccatactggaactcaag
gctgctgaagatttattgtcacagattcagaacaattaccagaagccacagaaagagttg
gaggtattaaaggaagcagcaagcagccttctttcaaaacgcagcagtgaactgcaggca
gcgagggaccttgtgagggaagcagaggtgaagaaccaggagagcgaccgcctgctgcac
attgtcagcgccaacctgcgagaatttaacgataagactgtgcgtgttcagcaagagcaa
aacttgacctccacgctgattgccagagggagaagattgttagacgctgtcactgcacct
gcagatgctgtaggagatgctctagcacagttagagcgtcaccgagatgagctactttta
tggactgccaaaatcaggcgccatgtagatgatctggtcatgcagatgtcccaaaggaga
gctcttgaccttgtctacagagcagaggaccacgcagctgaactccagagactagcaggt
gctctggacagtggccttggcagtgttagacatgtgtccctgaatgccaccagtgcaacc
cacgtccattccaacattcggagcatgattgaagaatcagagaaagtggcaaaagatgct
ctcaagatcgtgacaacggcgagtctgttctcagaatcccttgctcccaatgggaaagtg
gctctccagcgcagttccagatttctaaaagaaggcaacagcctgagcagaaagcatcaa
ggtatcacattggaactgagtaaattgaaaaatacagcaaacagatttcaagagaatgct
catacaattactaggcggaccaatgaatcactctccatccttagagcattccctgaaggt
gtcagagacaaaggagccaaaatcaaagagctggcctcatctgcaaatcggagcgctgca
agcaccctaaagaaggttgtgggattgagcaaggagctgttgaatacatcaactggcttg
tccagggttaatgccgccttacaagaaacaaacacacttctgcaggactcttcaatgacc
actctgctagctggaagaagagttaaagatgcagaaacacaggccagccttttatttgat
cggttgaagcctttgaagatattagaagagaacctgagcagaaacctatcagaaatcaaa
ctgctgatcagccaggcccggaaacaagcagcttctattaaagtcgctgtgtctgcagac
agagattgtgtccgggcctaccagcctcagatttcttctactaactataacaccttaaca
ctaaatgttaagacaagtgaacccgataaccttctcttctacctcgggagcagcaccagt
tctgatttcctggcagtggagatgcggcgagggaaggtggcctttctctgggatatgggc
tccgggtctacacggttggaatttccagacttccgagctgacgacaacaaatggcacagt
atctatgtaaccagatttggaaacattggttcattgagtgtaaaggaaatgagtgcaact
caaaagccatcaacaaaaacaagtaaatcccctggaacagctaaagttctggatataaac
aattcaacactaatgtttgttggagggcttggaggacagatcaagaagtctcctgctgtg
aaggttactcattttaaaggctgcatgggagaggccttcttgaacggacagtccatcggc
ctgtggaactatgttgaacgggagggcaagtgccacggctgcttcggaagcccccagaac
gaagactcgtccttccattttgatgggagtggttattcggttgtggagaagacgctccgg
gctaccgtgactcagataattatgctttttagtaccttttcacccaacgggcttcttctc
taccttgcttcaaatggcactaaagactttgtatccatcgagctggtgcgtggcagagtt
agagttacagttgacctgggttcagggcctcttgctcttattacagacagacgctataac
aacggaacctggtataaaatcgccttccagagaaaccgaaagcaaggactcctagcagtt
attgatgcatataacaccagttataaagaaacgaagcaaggtgaaactccgggagcatct
tctgacctcaatcgtctagataaagatccaatttatgtgggtggattacctaggtcaaga
attgtaaggaaaggtgtcaccagcaaaagctatgtgggctgtatcaaaaacctggaaata
tccagatcaacctttgatttactcagaaattcctatggagtgagaaaaggctgtatactg
gagcctatccgaactgttagcttcttgaaaggtggctacgttgaattgtcacccaggtct
ttgttgccagaatcggaactgttggcaacatttgccaccaagaacagcagtggcatcatc
ctggctgccctgggcaggcatggggagaagcagggtcatcggcaggcccacgggcaacct
tcccagcccttcttttccatcatgctgattgaaggccacattgaagtgcacgttaactct
ggggatggagcaaacctgagaagagctgtcctgcgtgctcccaagggcacatatggtgac
gggcaagagcattccatctctctgatgaggactgggagcgttatcactgtccaaatggat
gagacaaatcctgtagaaatgaagttgggcccatcagcagaaagcaggacaataaatgta
tccagcctgtacatagggggagttccagagggtgaggggacatcagtgctcaagatggga
agatcatttcacggctgtatcaaaaacctgatctttaacatggaacatttggatttcacg
agtgcggttggttatgaacaagtagatttggacacctgcttgctttcagaaaggccgaag
ctggctcttcatggagaggacagcgagctcccgccagagcctcagcctttaccaagtcta
gggcagtgtgctgtggacagagccccagagtacatccccaacgctcaccagtttggcctc
atgcaaagcagccattttgtgttgcccttcaatcagctggctgtcagaaagaggctctca
gttcagctaagtatccggacatttgcctccagcggtctgatttactacatggctcatcag
aaccaagttgattatgccacgctccagctgcatgggggccaccttcacttcatgtttgat
cttgggaaaggcagaacaaaggtctcccaccctgcagtgatcagtgatggcaggtggcac
acggtcaagacagagcactttaaaagaaagggcttcatgacagttgatggccaggaatcc
cccacggtgacagctgtgggagatggtaccatgttggatgtggaaggaaagctgtaccta
ggaggtcttccctctgagtacagagccaggaacattggaaacatcacccacagtgtcccc
gcctgcattggggaggtgatactgaatggcaaacagctggacaaaagcagcccagtgtct
gcatttgcagtaagcaggtgctatgcagtggcccaggaaggaacgttctttgaaggcagt
ggatacgcagctcttgtcaaggaaggctacaaagtccgatcagatgtaaatataacactg
gaatttcgtaccacctctgagaatggtgtcctcctggggatcagcagcgccaaagtagat
gccatcggattagagattgtgaatggcaagatcttgtttcatgttaacaatggtgctggt
cggataacagccacatataaacccaaagctaccagtactctgtgcgatggaagatggcac
acacttcaagctcagaaaagcaaacaccgcttggttctgattgttgatgggaatgcagct
cacgctgaaagtccacacacccagtccacctcagcagacaccaacaatcccatttatgtg
ggcggctaccctgctgacgtaaagcaaaactgcctgagcagccagacctccttccggggg
tgcttgagaaagctcactctgattaagggcccacaagtgcaatcctatgacttcagcaga
gcttttgatctacaaggagttttccctcattcctgtcctgggtctgaaccctga
DBGET
integrated database retrieval system
