Lynx rufus (bobcat): 124519911
Help
Entry
124519911 CDS
T08475
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03030
DNA replication
lruf03410
Base excision repair
lruf03420
Nucleotide excision repair
lruf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
124519911
03410 Base excision repair
124519911
03420 Nucleotide excision repair
124519911
03430 Mismatch repair
124519911
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lruf03032
]
124519911
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124519911
DNA replication proteins [BR:
lruf03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
124519911
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
124519911
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
Rad17
AAA_22
AAA_14
RuvB_N
AAA_7
AAA_17
AAA_5
AAA_33
AAA_30
AAA_18
AAA_16
nSTAND3
RNA_helicase
Zeta_toxin
NTPase_1
NPHP3_N
AAA_19
TIP49
SKI
Motif
Other DBs
NCBI-GeneID:
124519911
NCBI-ProteinID:
XP_046946332
LinkDB
All DBs
Position
Unknown
AA seq
1143 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVTDTVKKNEKTKSAEDTLKAKKGIKEIKVNSSCKEDDSKQKQPN
KKKRIIYDSDSESEETVQVKNAKKQPEKPKPGKILRQDPVTYISETDEEDDFMCKKAASK
SKENGRSTNSYLGASNKKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSVQRSDKKMVAS
KRKEPSQNVDDSRLNDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKKARKD
PEERETLSSVQANLSKVEKHKSPHKAKTEQFSDDRKNCSPKKQSKCESLKGSQQHLKSSP
HKIGETSPKASSKLALLKKKGESSYKETEPMASKRKENAIELKGQTKTPKKSKSSPAKKE
SISPEDSEKRRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIERDE
AKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTNIIDEDGLLNLIRTMPGK
KSKYEIAVEAEMKKEKCKLERTPQKNDQGKRKISPTKKESESKKSRLTPKRGSSMKSIKK
ETSAIWRSLDFEEQVAEETNVDSRARNLADDCSENKVENLLWVDKYKPTSLKTIIGQQGD
QSCANKLLRWLQNWHKSPSEDKKRAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTASLVC
QELGYSYVELNASDTRSKNSLKEIIAESLNNTSITGFYSSGGAHSVSMKHAVIMDEVDGM
AGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKGAMM
SIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDIK
LGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYVHVKPVAAGGDMKKHL
MLLSRAADSICDGDLVDRQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPTFPSWLGK
HSSAGKHDRIVQDLAQHMGLRTYSSKRTVNMDYLSHIRDALVQPLISQGVEGVQDVIALM
DTYYLMKEDFENIMEISSWGGKPSLFSKLDPKVKAAFTRTYNKEVHLTPYSLQAVKTPRH
STGASLDSEYSEELNEDDSQADEKDQDSMETDAMIKKKTKSSKPSKSEKDKESRKGKGKS
SKK
NT seq
3432 nt
NT seq
+upstream
nt +downstream
nt
atggatattcggaaattctttggggttataccaagtggaaagaaacttgtgactgacaca
gtgaagaagaatgagaagacaaagtctgctgaagacactttaaaagcaaagaaaggaata
aaggaaatcaaggtaaatagttcttgtaaagaagatgactctaaacagaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagaatccgaggagacagtgcaggtaaaa
aatgccaaaaagcaaccagaaaaacctaaacctggtaaaattctacgccaggatcctgtt
acatacatttcagaaacagatgaagaagatgactttatgtgtaagaaggcagcctctaaa
tcaaaagagaatggaagatctacaaatagttatcttggagcatcgaataagaaaaagaat
gaagaaaacactaagaccaagaataagcctttatcaccaataaaacttacccccacatca
gtgcttgattattttggaactggaagtgtccaacgatcagataagaagatggtagcaagc
aaaagaaaagagccttcacaaaatgtggatgattccagattaaatgatgaagccatcgcc
aagcaattgcaacttgatgaggatgcagagctggagcgacagctgcacgaagatgaagag
tttgccagaacgttagccatgttggatgaagaaccaaagaccaaaaaggctcgaaaggac
ccagaagaaagagaaacattgtcatctgtccaagccaatttaagtaaagtagaaaaacat
aaatctcctcataaagcaaaaacagaacaattttcagatgacagaaagaactgtagtcct
aagaagcaaagtaaatgtgaaagtttgaaaggatctcagcaacatttgaagtcctcacct
cacaaaataggggaaacttctccaaaagccagttccaagttggcccttttgaaaaaaaaa
ggagagagttcttataaagaaacagagcctatggcttcaaaaagaaaagaaaatgccatt
gaattgaaaggacagacaaaaactcctaagaaatccaaaagttctccagctaaaaaagag
tctataagtcctgaagattctgaaaagagacgcactaattatcaggcttatcgaagctac
ttaaatcgagaaggtcccaaagctttgggctccaaagaaataccaaagggagctgaaaat
tgcttggaaggccttacatttgtaatcacaggagtgctggagtccattgaacgagatgag
gccaagtctttaattgagcgttacgggggaaaagtaacaggaaatgtcagtaagaaaaca
aactaccttgtcatgggtcgtgatagtggacagtccaagagtgataaggcagcagctttg
gggacaaatattattgatgaagatggcctattgaatctgattcgaactatgccaggcaag
aagtccaagtatgaaattgcagttgaagctgagatgaagaaagaaaagtgcaaattggaa
agaacaccccaaaaaaatgaccaaggaaaaagaaaaattagcccaactaagaaggaatca
gaatctaaaaaaagcagactgactcccaaaaggggcagctctatgaagtcaataaaaaag
gaaacaagtgcgatttggagatccctggacttcgaggagcaggtggctgaggagacaaat
gtggacagccgggctaggaatttggctgatgactgcagtgaaaacaaagtggaaaatttg
ctctgggtggataaatataagccaacctcactcaagaccataatcggacagcaaggtgac
cagagctgtgccaacaaactcctacgctggctccaaaactggcacaagagtccatctgaa
gataagaaacgcgcaaagtttggtaagtttgctggcaaagatgatggctctagtttcaaa
gcggcactgctctctggccctccaggtgtgggcaagacaaccacagcgtctctggtttgt
caggaattaggatatagctacgtggaactgaatgcaagtgacactcggagtaagaacagt
ttgaaggagattattgctgaatcactgaataataccagcatcacgggcttttattcaagt
ggaggtgcccattcagtaagcatgaaacatgctgtcatcatggatgaagtagatggcatg
gcaggcaatgaggacaggggaggaattcaggaattaattggtttgataaaacatacaaaa
attcccattatttgtatgtgcaatgatagaaatcatcccaagattcgttctttggttcat
tattgttttgatcttcgttttcaaagacctcgagttgaacagattaagggtgctatgatg
tctattgcatttaaagagggtttaaagatcccccctccagctatgaatgaaataattttg
ggagccaatcaagatatcagacaggttttacacaatctgagtatgtggtgtgcacgaagt
aaggcactaacctatgaccaggccaaggctgattctcatagagcgaaaaaggatatcaaa
ctgggcccatttgatgttgcccggaaagtgtttgcagctggagaggagactgctcatatg
tcgcttatggacaagtcagatctcttttttcatgattattcaatagcacccctctttgtc
caggagaactacgtacatgtgaagcctgtagctgcagggggtgacatgaaaaagcacttg
atgcttttaagcagagcagcagatagcatatgtgatggtgacctagtggaccgtcagatc
cggagtaagcaaaactggagtcttctgcccacgcaggccatttatgctagtgttcttcct
ggagagttaatgagggggtacatgacccagtttcctaccttcccaagctggttggggaag
cactcatctgccggcaaacatgatcgtattgtacaggacctagcacagcacatgggtctc
agaacttattccagcaaaaggactgtaaacatggattatctgtcacatataagggatgca
cttgtacagcccttgatctcccaaggggtagaaggagtacaggatgttattgctcttatg
gacacatactacttgatgaaagaagactttgagaatatcatggaaattagcagctgggga
ggcaaacctagtctcttctccaagttggatcccaaggtgaaagcagcgttcacaagaacc
tacaataaggaagtccaccttactccatattcactccaggcagtgaagacacccagacac
agcacaggcgcatcactggattctgaatacagtgaagagttaaatgaagatgactctcaa
gctgatgagaaagaccaagattctatggaaactgatgcaatgatcaagaaaaagacaaaa
tcttcaaagccttcaaaatcagaaaaagataaggagtccagaaaaggaaaaggaaaaagt
tcaaagaaatga
DBGET
integrated database retrieval system
