Lynx rufus (bobcat): 124520320
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Entry
124520320 CDS
T08475
Name
(RefSeq) ATP-binding cassette sub-family E member 1
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lruf03009
]
124520320
Ribosome biogenesis [BR:
lruf03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
124520320
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
Fer4_RLI
SMC_N
AAA_21
Fer4
AAA_22
AAA
Fer4_6
RsgA_GTPase
AAA_15
AAA_16
AAA_29
NACHT
VapE-like_dom
nSTAND3
Rad17
AAA_30
Fer4_10
SRP54
Fer4_2
TsaE
Fer4_21
ORC-CDC6-like
Fer4_7
AAA_24
Fer4_4
Fer4_16
AAA_19
AAA_5
Fer4_3
AAA_23
Fer4_9
Motif
Other DBs
NCBI-GeneID:
124520320
NCBI-ProteinID:
XP_046947099
LinkDB
All DBs
Position
Unknown
AA seq
599 aa
AA seq
DB search
MADKLTRIAIVNHDKCKPKKCRQECKKSCPVVRMGKLCIEVTPQSKIAWISETLCIGCGI
CIKKCPFGALSIVNLPSNLEKETTHRYCANAFKLHRLPIPRPGEVLGLVGTNGIGKSTAL
KILAGKQKPNLGKYDDPPDWQEILTYFRGSELQNYFTKILEDDLKAIIKPQYVDQIPKAA
KGTVGSILDRKDETKTQAIVCQQLDLTHLKERNVEDLSGGELQRFACAVVCIQKADIFMF
DEPSSYLDVKQRLKAAITIRSLINPDRYIIVVEHDLSVLDYLSDFICCLYGVPSAYGVVT
MPFSVREGINIFLDGYVPTENLRFRDASLVFKVAETANEEEVKKMCMYKYPGMKKKMGEF
ELAIVAGEFTDSEIMVMLGENGTGKTTFIRMLAGRLKPDEGGEVPVLNVSYKPQKISPKS
TGSVRQLLHEKIRDAYTHPQFVTDVMKPLQIENIIDQEVQTLSGGELQRVALALCLGKPA
DVYLIDEPSAYLDSEQRLMAARVVKRFILHAKKTAFVVEHDFIMATYLADRVIVFDGIPS
KNTVANSPQTLLAGMNKFLSQLEITFRRDPNNYRPRINKLNSIKDVEQKKSGNYFFLDD
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atggcagataaattaacaagaattgctattgtcaaccatgacaaatgtaaacctaagaaa
tgtcggcaggagtgcaaaaagagttgccctgtggttcgaatgggaaaattatgcatagag
gttacaccccagagcaaaatagcatggatttctgaaaccctttgtattggttgtggtatt
tgtattaagaaatgtccctttggcgccttatcaattgtcaatttaccaagcaatttggaa
aaagaaacaacacatcgatattgtgccaatgccttcaaacttcacaggttgcctatccct
cgtccaggtgaagttttaggattagttggaactaatggaattggaaagtcaactgctcta
aaaattttagcaggaaagcaaaagccaaaccttggaaagtatgatgatccacctgattgg
caagaaattttgacttacttccgtggatccgaattgcagaattactttaccaagattcta
gaagatgacctaaaagccattatcaaacctcagtatgtagaccagattcccaaggctgca
aaggggacagtgggatctattttggaccgaaaggatgaaacaaagacacaagcaattgta
tgtcaacagcttgatttaacccatctaaaagaacgaaatgttgaagatctttcgggagga
gagttgcagagatttgcttgtgctgtcgtttgcatacagaaggctgatattttcatgttt
gatgaaccttctagttacctagatgtcaagcagcgtttaaaggctgctatcactatacga
tctctcataaatccagatagatatatcattgtggtggagcatgatctaagtgtattagac
tatctctcggacttcatctgctgtttatatggcgtaccaagtgcttacggtgttgtcact
atgccttttagtgtaagagaaggcataaacatttttttggatggctacgttccaacagaa
aacttgagattcagagatgcatcacttgtttttaaagtggctgagacagcaaatgaagaa
gaagttaaaaagatgtgtatgtataaatatcctggaatgaagaagaaaatgggagagttt
gagctagcaattgtagctggagagtttacagattctgaaatcatggtgatgctgggggag
aatggtactggtaaaaccacatttatcagaatgcttgctggaagacttaagcctgatgaa
ggaggagaagtaccagttctcaatgtcagttataagccacagaaaatcagtcccaaatca
actggaagtgttcgacagttactacatgaaaaaataagagatgcatacactcatccacag
tttgtgactgatgtgatgaagcctctgcaaattgaaaacatcattgatcaagaagtgcag
acgttatctggtggtgaactgcagcgagtagctttagctctttgtttgggcaaaccggct
gatgtctatttaattgatgaaccatctgcatatttggattctgagcaaagattgatggca
gctcgagttgtcaaacgtttcatactccatgctaagaagacagcctttgttgtggaacac
gacttcattatggccacctatctagcagatcgagtcatcgtctttgatggtattccatct
aagaacacagtcgcaaacagtcctcaaactcttttggctggcatgaataagtttttgtct
cagcttgaaattacattcagaagagatccaaacaactataggccaagaataaacaaactc
aattcaattaaggatgtagaacaaaagaagagtggaaactactttttcttggatgactag
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