Lynx rufus (bobcat): 124520558 Help Entry 124520558         CDS       T08475                                  Name (RefSeq) protocadherin-23-like   KO K16507   protocadherin-16/23 Organism lruf  Lynx rufus (bobcat) Pathway lruf04392   Hippo signaling pathway - multiple species Brite KEGG Orthology (KO) [BR:lruf00001]  09130 Environmental Information Processing   09132 Signal transduction    04392 Hippo signaling pathway - multiple species     124520558  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:lruf04515]     124520558 Cell adhesion molecules [BR:lruf04515]  Cadherins   Cadherin related    124520558 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Cadherin Cadherin_CELSR2_9th Cadherin_2 Fibulin_C Cadherin_pro Cadherin_4 7TM_GPCR_Sru TAS2R Motif Other DBs NCBI-GeneID:  124520558 NCBI-ProteinID:  XP_046947463 LinkDB All DBs Position Unknown AA seq 3357 aa AA seqDB search MSPSGRRMGKGHRQRGAPATRRLPMPGRRGSPRGLPGGGGGATGAQRFLLGLFLHAWLWA ASGSSAQVFNLSLSVDEGLPPDTLVGDIRAGLPAAQQQEAGGFFLSEDSDDSPLLDDFHV HPDTGIIRTARCLDREQRDHYSFVAATLLGAVVQVEILVNDVNDHSPSFPRDSLQLDVSE LSPPGTAFRLPGAHDPDAGLFSTQGYTLVQPSALPEDPAGPFFQLRYGTPGSPPSPPLSS PLEPLDLVLLRRLDREAVAAHELQIEAWDGGRPRRTGHLRVELRVLDENDNPPVFEQSEY RAAVREDARPGAEVCRVRATDRDLGPNGHVYYSIRARQALWPLGDAAYFAVEELSGVVRV QRPLDREAQAWHQLVIEARDGGAEPEVATVRVSIAVLDVNDNPPAIHLLFLTEGGAARVS EGAALGDYVARVSVSDADGDPEQEEEAIGEPGVGLGSGSISLSLEGGDGAFALRSGGSPG VFFLCVEGPLDRESRDLYDLRLVATDAGSPPLSTEETLLLRVADLNDQPPLFSREHYLAS VSEAAAPGTAVVWVSASDADEAGTDHARLRYALVHLPVHCNPEGVWPAAECGPSFTIDPE SGVISTIRSLDREVQEAVELRVVAQDLGEPPLSATCLVSITVDDVNDNEPIFRRQVYNVT LAEHAPVGHCFLQVKASDADAGLYGFVEYSLYDGFQSYDTSQAFQIDPHDGRICVSQDID RERDPATYDLLVKAKDGGGLSAQAFVRVEIEDVNDNAPVFNPSTYVMSISGQTQPGTEII NVLATDRDSGIYGTVTYELIPGDLSSLFTIDSTTGIIYLTSTLSHLESATLLLMVCARDG GGLTSVINADITIHILQTMLAPAEFERPKYTFSVYEDVLEDSPVGTVKAKESLNSSEPVS YRISSGDLDRKFSIHPWLGVIRTQKPLDHETQPVVVLTVQAQLGGSPAYGSTEVNITVID VNDNHPVFPKASDEVKISQTTLPGTALYLARAQDKDSGQNGFIRYTIASQNPSIFSIDSG LGVVYLNQSLGSGTPQKCTLTLMAQDLGVPPQASLLVLTVVIEEQEQSPSLTFANLVYQV EVSESVSLMTQILQIHAYPLGPQGASLQLLYSLEPSADSAVFGIRPHTGWIYLRRQLDYE STQTYNFRVFAWILEDRLSQNVSTSVIVHVLDENDNSPTFLHDVLFLKVEESPVPQGVIG KITAIDRDSGKNGQLSYFLLSDGKFFKMNPNTGELISWVALDHEHQVHHQVIVLVTDHGS PPRNASMVVYVSVTDINDNRPYFPQCLPGKELHVKVLEGQPVNMLVTTVFAKDFDEGNNA EVVYSVSPEGSSDHFKIDANSGEIRTTTILSHDYRPSYRMTIIASDQGEPPLQGQAVINI QVIPLSKGRAIISQNIRHLVLPENLKPAKIMSLIKSADHLQQHHNGKLHFSIAADDKDGH FKIDSSTGDLFLSKELDYEMTSHYLFRVVTKDHSKTPPLNSTVFLNIDVEDQNDHSPSFQ EELIVISVEENVPIGTLVHVFNAKDGDGSFLNSRIQYFIESHHPGMSPFLIHPSFGTLVT ASPLDRERVPAVMLTITASDQAVNVTDRRVGSLMAKVVILDVNDHSPTFMSFPMAHIKED ATVGSLVHHITAQDPDEGRNGRVTYSILSGNENMAFMLDESSGLLTTTCPLDYEIKTQHI LTLLALDDGIPVLSSSQTLTITVLDVNDEAPVFQQNLYEASVKENQNPGEFVIRVEAMDR DSGINSKFQFEIMPGASSGLFKINPDTGEVVTTTTLDREVQEVFTLRVLVRDGGVPSLSG TTTILCTVEDENDHAPEIIVPSHSIEVLENQEPGVAYTILASDMDAGDNGAVRYHIIDGN TDEYFAINETSGDLSTTRALDREQVSNFTLVILCSDLGDPPRSSLVQLQVRVLDDNDHGP SFPTLHYQASVREDAEVGTVVLVLSAVDKDEGLNGQTEYFLEGEASGTFTIDSVAGALRT CHTLDREARSQHTFRAVARDCSVQGSRSTTVIIKVHVMDVNDNDPVWEQNPFEIFLSTQS PPNQTTAILTASDPDLGPNGTVMFSFAETQSMFSIDKYTGEVQLRHNPSSEYFPIWLQLK VMDQGVPARTVTGLLVVHMEGEDRKISFSHPLYKGTVTENCDAGTSIVTVKAVAPDPIQD SIKYSIFSGNEDGVFSLCSNSGELTVKEPKFLDFEVRNEVQLIILAESRGHRAFSKVAVL IQDVNDNLPCFEQSVYQVSVPEGQFYNARIIQVFATDLDSGLNGLIEYSILSGNQGDAFH MDVLSGVVTANAILDYEFTNSYSLIVQATDKGMPSLSGTSVIKIQVTDTNDNAPAFLPSG AVEIAENSLPGVIVTQISVHDVDLNPAFIFNFAKESNPGTKFAIDRNTGVVILVKTLDFE EATEYELLIQISDTVHHTEGTLMVRVLDVNDNPPVFSQDSYQATVPESVPVGYSVLTVGA TDVESNENISYRILSSSKEFSIDPMNGTIFTINPVLPLDKISTIQFLVEASDGGIPDLSA LTLVEIEIQDTNNYAPEFAVKYYNLSLSEDAQIGGTLLTFSTMDRDWTRENTYVDYSIIS GNSQNNFHVETSFIHSEDPYKQAGYLVLLRSLDREVAASHNLVIVASDHGCPPLSSTAIV SIEVLDVNDNPPKFSSLKYHAHVKESTPLGSHITVVSANDRDVGPHAEIIYHIISGNERG HFHLEEKTGVLYLIKPLDYEETTKFTLTIQASDEERKHFSFAVVFINVLDDNDHAPQFMF SNLNCVVPENVPVFSTVCSVNALDFDAGPYGELTYSILSPCSTTHGMPRDHHPFLIDPLT GDIHTKQVLDYENDNKYCLIVQAKDKGDSAASLMVWVDIEGIDEFEPIFTQDQYFFNLPE KNKIRQLIGKVEASDADAGIDGVILYSLETPSPFFLVNKTNGNIYLTRALPLIRSQVREQ DTIEMKIIAHSPKPDSKFTFCAVFVNVSSFSEGQHSAISGSSFSISVTVSFLVFLILIFI LIVLILRHKQKDTTNNYEEKKTSSSSDISLRLTTDGSMLKPFQKANECRNEAVPVDSMPE WLSLISIMEKDIVNLYRHSNSSGHCSVEGESAEDKEIQRINEHPYRKDSGSALSDRESRV PDSGIPRDSDQLSCLSGETDVVVTAETAETSHTFEEDKEGCGTTYAQNVLPQTLKKREIK ENILADVRREFVFISDDQEARCAALSTQRTSDHDVRGSYHWDNLLSWEPKFQPLASVFND IAKLKDEHLHTPGIPKEKSLVIPPPLITAVAQPGIKAVPPRMPARTPGQVLQKYPHSPLP YHLSSLPEASTPSFSPSLFLLATQTPARTPLFSNGESLGTHLSGTCRELKAEDEVQI NT seq 10074 nt NT seq  +upstreamnt  +downstreamnt atgagcccttctgggaggaggatgggcaaagggcaccggcagcggggggctccggccacg aggcgccttccgatgccagggaggagagggtcgccccgtgggctgccgggcggcggcggc ggcgccacgggggctcagcgcttcctgctcgggctcttcttgcacgcgtggctctgggcg gcttcgggctcatctgcccaggtgttcaacctcagcctttctgtggacgaaggacttcct ccggacactctagtaggagacatccgcgccgggctgcccgctgcacagcagcaggaggcg ggcggcttctttctatccgaggattccgatgactcaccactgttggacgacttccacgtg catccggacaccggcatcatccgcacagcgcggtgcctggaccgcgagcagcgggaccac tacagctttgtggccgccacgctgctgggagccgtggtgcaggtggagatcctggtcaac gacgtgaacgatcactcccccagctttccccgcgactccctgcaactcgacgtttccgag ctcagccctccaggtaccgccttccgcctgccaggtgcccacgacccggacgccggcctg ttcagcactcagggctacaccttggtgcaaccgtccgcccttcccgaggaccccgcggga ccgttcttccagttgcgctacggaactcccgggtcaccgccgtcgccaccgttgtcgtcg cccctggagcccctggacctggtgctgctgcggcgtttggaccgggaggcggtggctgcg cacgagctgcagatcgaggcatgggacggcggccgcccgcggcgcacgggccacctgcgt gtggagctgcgcgtgctggatgagaacgacaaccccccggtcttcgagcagagcgagtac cgcgccgccgtgcgggaggacgctcggccgggagccgaggtctgtcgcgttcgcgccacc gaccgtgacctggggcccaatggccacgtgtactacagcatccgcgcccggcaggcgctc tggccactgggcgatgcggcctacttcgccgtggaggagctgagcggcgtggtgcgggtg cagaggccgctggaccgcgaggcacaggcctggcaccagctggtgatagaggcccgcgac ggaggggccgagcccgaggtcgccactgtgcgcgtgtccatcgcggtgctggacgtgaat gacaacccgcccgccattcacctgctcttccttaccgagggtggggcggcgcgcgtttcc gagggcgcggccctcggcgactacgtggctcgagtctccgtgtccgacgcggacggggat cccgagcaggaagaggaggccatcggggaacccggcgtgggcctcggaagcggaagcatc tcgttgtccttggagggcggagatggagccttcgcgctgcgctctggtggctccccgggg gtatttttcctttgcgtcgaggggcccctggaccgtgagagccgcgacctgtatgatttg cgactggtggccacggatgcgggctccccgccgctgagcaccgaggaaacgctgctgctc cgggtcgccgacctcaacgaccagccgcctctcttcagccgggagcattacctggcctcc gtgtcagaggccgcggcccccggcacggcggtggtgtgggtcagcgcctctgatgcggac gaggctggcaccgaccacgcccggctgcgctacgcactggtccaccttcccgttcactgc aacccggaaggtgtgtggcctgcagcggagtgcggaccgtccttcactattgatcctgaa agcggcgtgatcagcaccatccggagtctggaccgagaggtccaggaggcagtagagttg agagtggtagcccaggacctcggagaacccccactctctgccacctgcctggtgagcatc accgtggacgatgtgaatgacaacgagcccatcttcaggaggcaggtgtacaacgtcacc cttgcggagcatgccccagttggacactgctttttgcaggttaaagcttctgatgcagat gcaggactctatggctttgttgaatattctctttatgatggattccaaagctatgacaca tctcaggcattccagattgacccacatgatgggagaatctgtgtttctcaagacatcgac agggagagggatccagccacctatgacctcttggtgaaagctaaggatgggggtggacta agcgcccaagcttttgttcgtgtggaaatagaggatgtgaatgataacgcacctgtcttt aacccatcaacctacgtgatgagcattagcggccagacccagccaggcaccgagatcatc aatgttcttgccactgacagagattctgggatatatggaacagtgacttatgaactcatt cccggagacctgtcgtcccttttcaccattgactccactacgggaattatttacttaaca tcaactcttagtcatttggaatccgctacacttctgttgatggtctgtgctcgagacggt ggcgggctcacatctgtcattaatgctgacatcactatacacattcttcagacaatgctg gcacctgctgaatttgaaaggcctaagtatactttctcagtttatgaagatgtacttgaa gacagtcctgtgggaacagtgaaagcaaaagagtccttgaattcctcagagccagtttct tacagaatctcctctggtgatctggacagaaagttctctattcacccgtggctgggcgtc attcgaacccagaagcctctggatcacgaaacccagcccgtggttgtgctcacggtgcag gcgcagctcggcggctcccctgcttacggcagtacagaggtcaacataactgtaatcgat gtcaatgacaaccatccagtatttcccaaagcctctgatgaggttaaaatatcccagacc acactgcctggcacagccttgtaccttgcccgtgcacaagacaaagacagtgggcagaat ggattcatccgatacaccattgcaagccagaatccaagcatcttttccattgactcgggg cttggtgtggtgtacctcaatcagagtctgggaagtgggacgccccagaagtgcacacta actctcatggcccaggacctgggcgttcctcctcaggcatccctgttagtgctgacagtt gtgatcgaagagcaagaacagagcccgtctttgacttttgcaaacttggtctatcaagtg gaagttagtgagtctgtctcactgatgacccaaatactgcaaatacacgcctacccactt gggccacagggtgcaagcttgcagctcctgtactcgctggaacccagcgcggactctgct gtgtttggcatccgccctcacacaggttggatttatttgcggcgacagcttgactatgaa tccacacagacatataattttagagtgtttgcctggatcctggaggacagattgtcgcaa aatgtgagcacttcagtaattgttcatgtcctggatgagaatgacaattcccctaccttc ttgcatgatgtgttgtttttgaaagtcgaggagagccctgttccccaaggggtaataggc aaaattacagcaattgacagagactcgggaaagaatggacagctgtcatatttccttttg tctgatggaaaattcttcaagatgaatcctaacacaggcgaattgatcagttgggtggca ttggaccatgagcatcaggtacaccatcaggtgattgtcctagtgaccgaccatggctcc ccaccacgaaacgccagcatggtggtttacgtctcagttactgacatcaacgacaacagg ccatatttcccacagtgtctccctggaaaggaattgcacgtcaaggttctggaaggtcag ccagtaaatatgttggtgacaactgtgtttgcaaaggattttgacgaaggaaacaatgca gaagtcgtatattcagtatctccagaaggtagttctgatcacttcaagattgatgccaac agtggtgaaatcagaacaaccacaatactttcacatgactacagaccttcctacaggatg accataattgccagtgaccagggggagcctcctcttcaaggacaggcagtcattaatatt caggtgatacctctatcaaaagggagagctatcatttctcagaatattagacacttagtt ttaccagaaaacttgaagcctgcaaaaataatgagcttgataaagtcagccgatcacctt cagcaacatcataatggaaagttacattttagtattgctgcagatgacaaggatgggcac ttcaaaattgacagctcgacaggagacttattcctttctaaggaacttgattatgaaatg acatcccattatttattcagggtggttactaaagaccatagcaaaacccctcccctgaat agcacggtcttccttaatattgatgtggaagatcagaatgaccattccccatctttccaa gaagagctcatcgtgataagcgtggaagagaatgtccctatagggacgctggtgcatgtc ttcaatgccaaggatggggatggcagttttttgaacagtagaattcaatacttcatcgaa tcccaccaccctggcatgagtccctttcttatccacccctcatttggcacattagtcact gcatccccccttgacagagagagagttccagctgtcatgctgacaataacagcatccgat caggctgtgaatgtgacagaccggcgcgtgggatcactgatggcaaaggtagtgattttg gatgtaaatgaccacagccccacttttatgtctttccccatggcccacatcaaagaggat gccacagtgggctctttggtgcaccacataactgctcaagatccagatgaaggaaggaat ggaagagtaacatacagcatcctttcaggaaatgaaaacatggcctttatgctagatgag tcatcaggcttactaacaacaacttgtcctttggattatgaaataaaaacccagcacatt ctgacccttctggccctggatgacggcatacccgtgctttcttcatcccagactttgaca attactgttcttgatgtaaatgatgaggcaccagtatttcagcagaacttgtatgaagct tcagttaaagaaaaccaaaatccaggggagtttgtcataagggttgaagctatggacaga gattcaggaatcaattccaagtttcagtttgaaatcatgccaggtgcttcatctgggttg ttcaagataaatcctgacactggagaggtagtgacaaccaccacacttgacagagaagtt caggaagttttcacccttcgagtacttgtgcgagatgggggagtcccttcgttatctggc accaccacgattctctgtactgtggaagatgaaaacgatcacgcaccagagattattgtc cccagtcatagcattgaggttctggaaaaccaagagccaggggttgcctacactattttg gcttctgatatggatgctggtgataatggagctgtcagatatcatataattgatgggaat actgatgagtactttgctattaatgaaacatcaggagacctctcaaccactcgcgctttg gaccgggagcaagtcagcaattttaccttagtcatcctgtgttccgacctaggggatcca ccgaggagctctctagtgcagttgcaggttagagttttggatgacaatgaccatggccct tccttccccacgctgcattaccaggcctccgtgagagaagatgctgaagtggggacagtg gttctggtactatctgctgtggacaaggacgaaggtctgaatgggcaaactgagtatttt ctggagggtgaagcttctggtacattcaccattgattctgtggcgggtgcactgagaacc tgccacaccttggaccgagaagccagatcccaacatacatttcgggctgtggccagagac tgtagtgtccagggctcgagaagcaccacagtaattataaaagtgcatgtcatggatgtt aatgacaatgatccagtgtgggagcagaacccctttgaaatttttctttccacccagtca cctcctaaccagacaactgccattctgacagccagcgaccccgacttgggccccaatgga actgtcatgtttagttttgcagagacccagtcaatgttttctattgataagtatacagga gaagttcaacttcggcacaacccatcttcagaatattttccaatctggctgcagttaaaa gttatggaccaaggcgtcccagctaggacagtcactggcctcttagtcgttcacatggaa ggagaagatagaaagatttccttcagccaccctctgtataaagggactgtgactgaaaat tgtgatgcaggtacttctattgtgactgtaaaagctgttgctcctgacccaatacaagac agcattaaatattcaatttttagtggaaacgaagatggggttttttccctgtgctccaac tcaggagaactcactgtgaaagaacccaagtttctggattttgaagtcagaaatgaagta caactcatcattttagcagaaagtagggggcatagggccttcagcaaagtagcagtcttg atacaagatgtgaatgataatttaccgtgctttgagcagagcgtgtaccaagtatcagtg cctgaaggccagttctacaatgctcgcatcatacaggtttttgctaccgacctggacagt ggattgaatggcctcattgagtactctattctctctgggaaccaaggggatgccttccac atggacgtgctgagtggtgtagtgacagcaaatgcgattctagattatgagttcaccaat tcctacagcttgattgtgcaagccacagataaggggatgcccagcctttctggtacaagt gtgatcaagatacaggtgaccgatacaaatgacaatgccccggcttttctcccctctgga gcagtggaaattgcagaaaattctttgcctggtgtgattgtgactcagatatccgttcat gatgtggatttgaatccagctttcatcttcaatttcgccaaagagagtaatcctggaacc aagtttgccattgatcggaacactggagtggtgatactagtgaaaacattggattttgaa gaagctactgaatatgagctgctcatccaaatttctgatactgtgcatcacacagaggga acactcatggtccgtgtgttggatgtcaatgataatccaccagtattttctcaagattct taccaggccactgttcccgaatcggtgcctgtagggtactcggtgctgactgtgggagcc acagacgtagaaagcaatgagaacatttcttacaggatcctttcttcgtcgaaggaattt tcaattgatccaatgaatggcacaatatttactatcaatcctgtattacctctggataaa atatcaacaattcagtttctcgttgaagccagtgatggtggcattcctgacctgagcgct cttaccttagtagaaatagaaatacaagatacgaacaattatgcccctgagtttgcagta aaatattataatcttagcttgagtgaagatgctcaaattggaggcacgcttctcacattt tcaaccatggaccgtgactggacccgtgaaaacacatacgttgattattcgatcatcagt ggtaattcacagaataatttccatgtagaaactagtttcattcattcagaagatccttat aagcaagctggttacctggtgttgcttcgtagcctggacagagaagtagctgccagtcat aaccttgtcattgtggcatctgaccatggctgccctccattgagctctacagccattgta tcaatagaagtacttgatgtcaatgataatccacctaaattcagcagtctgaaatatcat gcccatgtcaaggaaagtacccctctagggagtcacatcactgtggtctctgcaaacgac cgtgatgtgggtccacatgcagaaatcatctaccacatcatctctggaaatgagaggggg cattttcacttggaagaaaaaactggagttctttatttgattaaacctctggattatgaa gaaacgacaaaattcaccttaactattcaagcttcagatgaagaaaggaagcatttttct tttgcggttgtgtttatcaatgtcctggatgataatgaccatgcacctcagtttatgttc tcaaacttaaattgtgttgttcctgaaaatgtccctgttttctccactgtatgttccgta aacgctttggattttgatgcaggtccttatggagaattgacctattctattttatcgccc tgttccaccactcacgggatgcctcgtgatcaccatcccttcctcattgaccctttaaca ggggatattcacactaagcaagtccttgactatgaaaatgacaataaatactgcctcata gttcaggcaaaagacaaaggggactcagcagcctctttaatggtttgggtggatattgaa gggatagatgagtttgaacccatttttactcaagatcaatattttttcaaccttccagaa aagaataaaataagacagttgattggcaaagtggaagcatcagatgcagatgctggtatt gatggagttattctttactctttggaaactccatctcctttctttttagtaaataaaact aatggaaatatttatttgactagagcacttcccctgataagaagtcaagtccgtgaacaa gacaccattgaaatgaaaataatcgctcatagccccaaaccggactccaagtttacattt tgtgctgtttttgtaaatgtgtcttctttctcagaaggacaacactcagcaatatcaggt agcagcttttccatcagtgtcacagtctcctttttggtgtttctgatactcatcttcata ctaattgtattgattttaagacataaacaaaaagacacaacaaacaattatgaagaaaag aaaacatcatcatcctcagatatcagtttgagactgaccacagatggcagcatgctcaag cccttccaaaaagctaatgagtgccgtaatgaggcggtgcctgtggactccatgcctgag tggttgagtttaataagtatcatggagaaagacattgtgaatctgtacaggcactcaaac tccagcggccactgttctgtggaaggagaaagtgcagaagataaggaaatccagaggata aatgagcatccttacagaaaggactctggctcagctctgagtgatcgggaatccagggtc ccagactctggaatcccaagggactcagatcagctctcctgcttgtctggagaaactgat gtggtggtcactgctgaaacagcagaaaccagccatacatttgaggaagataaagaaggc tgtggtacaacctatgctcaaaatgtgttaccccagacactaaagaagagagagataaaa gagaacatcctggctgatgtcaggagagagttcgtctttatttcagatgatcaggaagca aggtgtgcagcgctttccacccagagaacctctgatcatgatgtgagaggcagctaccac tgggataatctcctcagttgggaacccaagttccaacctcttgcctcagtatttaacgat attgcaaaactaaaggatgaacatttacatacaccgggcattccaaaagagaaatcttta gtgattccaccacctttgataacagcagtagcccagcctgggattaaagcagttccacca agaatgccagccagaaccccaggtcaagtgctccagaaatacccacactccccccttccc taccatctcagttctctgccggaagcctcgacccctagcttttcaccatctcttttcctg ctggccacacagacccctgccaggaccccactgttttcaaatggggaatcattaggaaca catctaagtggtacgtgccgtgaacttaaagcagaagatgaagttcaaatataa

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