KEGG   Lynx rufus (bobcat): 124520840
Entry
124520840         CDS       T08475                                 
Name
(RefSeq) synaptopodin-2
  KO
K24066  synaptopodin-2
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    124520840
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:lruf04990]
    124520840
Domain-containing proteins not elsewhere classified [BR:lruf04990]
 PDZ domain-containing proteins
  Other PDZ domain-containing proteins
   124520840
SSDB
Motif
Pfam: PDZ Calsarcin PDZ_6 PDZ_2 CFAP298
Other DBs
NCBI-GeneID: 124520840
NCBI-ProteinID: XP_046947894
LinkDB
Position
Unknown
AA seq 1262 aa
MGTGDFICISMTGGAPWGFRLQGGKEQKQPLQVAKIRSQSKASGSGLCEGDEVVSINGNP
CADLTYPQVIKLMESITDSLQMLIKRPSSGVNETSISETENKNPEHPTHERCVESTTLQI
RPATKNQHREFYVASIKSGVPLTEDQGSGPGFSESIKEETGLSYHVAPYMPDSQRGRLAE
EVILREKAEAGQPGPVVELQLSLSQERHKGTNVPVVALLGAEKSKSPDPDPYLQHDRIVH
INSVPTNEKGEPSLRSSKIIQISSGKELKVIQGNEAGDKGLPRVEVILDCLDRQKTEGCR
LQAGKGCVDSPVEGGQSEAPPSLVSFAVSSEGTEQGEDPRLERDHSRPHKHRARHARLRR
SESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRAKKYTLVSYGTGELERE
ADEEEEGDKEDNCEVAFLGTSESEVDEELLSDIDDSAQVVNFDWDSGLVDIEKKLNRGDK
MEMLPDTTGKGALMFAKRRERMDQITAQREEERMGGVPGREPDAAQTDSLRTMASYQRKE
EESVKVQSSVSRSYIEVSHGLGHGPQQNGFSGVSETAEAQRTVPMNRTAKPFPGSVSQPA
APFSPTRNMTSPIADFPAPPPYSAVTPPPEGFPRAVSSPTAGPAQPPPWPQPAPWSQPAF
YDSSERIASRDERIAVPAKRTGILQEAKRRSTTKPMFTFKEPKVNPNPELLSLLQNSEGK
KGAGAGGDSGPEEDYLSLGAEACNFMQSSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVW
SPGMAPSQPPAFPTSNPSQGTVVSSIKIAQPSYAPARPTSALTLAGPFKGPQAAVASPNY
TPKPTAPALTVNAAHAGAVGPSNELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQAHAARA
QSPTPSLPAGWKYSSNVRAPPPVAYNPIHSPSYPLAAVKSQSSAPQASKTSKKKGKKPLN
ALDVMKHQPYQLNASLFTFQPPDAKDGLLQKSSIKVNSMPAMKQALPPRPVNAGSPTNAQ
ASSVYSVPAYSSQHPFFAEATSPVSASPVPVGIPTSPKQESASTSYFVAPRPKFSAKKSG
VTVQEIGRSLSLPGRPVPPTISTTSPWIYQPGYSYSSKPTDGLEKANKRLTPWEAAAKSP
LGLVDDAFKPRNIQESIVANVVSAARRKVLPGPSDDWNKRLSCVPQAQKASMGSFARQEY
NVASLPDNNMPTNSQYGSQVSYAYYRQPSRNDSEIMSMETRSDYCLSIADYNYNPHPRGW
RR
NT seq 3789 nt   +upstreamnt  +downstreamnt
atgggcacgggggattttatctgcatttccatgaccggaggggcgccctgggggttcaga
ttgcaaggtggcaaggagcagaagcagcccttacaagttgctaagatccgaagccagagc
aaagcctctgggtctgggctctgtgagggggatgaagtggtttctatcaatggcaaccct
tgtgcagaccttacctacccccaggtcatcaagctcatggagagcataacagactctctc
caaatgctcatcaaaagaccatccagtggagtaaatgagacttccatctctgaaactgaa
aacaaaaaccctgagcatcccacccatgagcggtgcgtggaaagtaccactctgcagatt
cgaccagccacaaagaaccagcacagagagttctatgttgcctcgatcaagagtggagtt
cctctaactgaggaccaagggagtggtcctggtttttctgagagcataaaagaagaaaca
ggcctgagctaccatgtggctccctacatgcccgactcccaaagaggacgcctagcagag
gaggttatcttaagggagaaggcagaagctgggcagccaggcccggtggttgagttacaa
ctgtccctttcacaagagagacacaagggcacaaatgtccccgtggtggctctcctggga
gctgaaaaatctaagtctcctgacccagatccttatttacaacacgacaggattgtccac
ataaattcggtccccacgaatgagaaaggggagccttctctgaggtccagcaagataatc
cagatctccagtggcaaagagttaaaagtgatccagggaaatgaagcaggagacaagggg
ctgccccgagtggaagtgatactcgactgcttggacaggcagaagacggaagggtgcagg
cttcaggcaggaaaggggtgtgtggattctccagtggaaggagggcagtcagaagcacct
ccttctctggtatcctttgcagtctcatcagaaggcacagagcagggagaagatccacgc
ttggaaagggatcacagcagacctcacaagcacagagcgcgtcacgcacggctcaggaga
agtgaaagcctatcagaaaagcaggtgaaagaagcaaaatctaaatgcaaaagcattgcc
ctccttctaaccgacgcccccaaccccaactccaagggggtgttgatgtttaagaagcgt
cgtaggcgggccaagaaatacaccctagtcagctacggcaccggtgagcttgagcgagag
gcagacgaggaggaagaaggagacaaagaagacaactgtgaagtagcatttctgggcacg
agtgaatcagaggtggatgaagagttattgtctgacattgacgacagtgcacaagttgtg
aactttgactgggattctggactagtggacatcgagaagaaactgaacagaggggacaag
atggagatgctgccagacaccacgggcaagggtgccctcatgtttgccaagaggagggag
cgaatggatcaaatcacagcccaaagagaggaggagaggatgggaggagtgccaggcaga
gagccagatgctgcccagacagacagcctgagaaccatggcttcttaccagaggaaggaa
gaagagtctgtgaaagtgcagagctcagtgagcagaagctacatcgaggtgagccatggt
cttggccatgggccccaacagaatggcttcagtggggtgtccgaaacggcagaggcccag
aggacggtccctatgaacagaacagccaaacccttcccggggtctgtgagccagcctgca
gcccccttctccccaacccggaatatgacgagtcccatcgcggacttccctgcgcctcca
ccttattctgcggtcacacctccacctgagggcttccccagagcagtgtcgagtcccaca
gctggcccagcgcagcctcctccgtggccccagcctgccccgtggtcccagccagccttt
tacgattcatctgagcggatagcttcccgggatgaaaggatcgctgtgcctgcaaaaaga
accggaatattgcaggaggccaaaaggaggagcacgacaaaacccatgttcacttttaaa
gagcccaaggtgaacccgaatcctgaactcttgtcacttcttcaaaattcagaaggcaaa
aagggagctggagctggaggcgattccggacccgaagaagactacctcagtttaggagca
gaggcttgtaatttcatgcagagctcctctgccaaacaaaagactccgcctcctgttgct
ccgaaacctgcagtcaagtcctcgtcctcccaaccagtaactccagtttctccggtctgg
tccccaggaatggctccaagccaacctcctgccttccccacgtccaacccatcgcagggc
accgttgtctcctccatcaaaatagcccagccttcctacgctcctgcccggcccacgagt
gctctgaccctggctggtcccttcaaaggaccacaggcagcagtggccagtccgaactac
acaccgaagccaacggctcccgcactgacagtaaacgccgctcatgctggtgcagtggga
ccatccaatgagcttccgggaatgagcgggaaaggagcccagctctttgctaaaaggcag
tcgaggatggagaagtacgtggtggattcagacaccgtgcaggcccatgcggctcgcgcc
cagtctcccactccctctctaccggccggatggaagtactcctccaacgtccgagcacct
cctcctgtggcctacaatcctatccactccccctcctaccctctggccgctgtcaagtct
cagtcatcagccccacaggcctccaagacaagcaagaaaaagggcaaaaaacccctcaat
gctttggacgtcatgaagcaccaaccataccagctaaatgcatccttgtttactttccaa
cctccagatgcaaaggatggcctcctccaaaagtcatccatcaaggtcaattcgatgcca
gccatgaagcaagctcttcccccccggccagtgaatgctggctcgcccactaatgcgcag
gcctcatctgtgtactcagtcccagcatatagctctcagcatcccttctttgcagaggcc
acctcgcccgtcagtgcgtcgccagtgcccgtgggcattcccacctctccaaagcaagaa
tcagcctctacatcttattttgtggcaccaaggccgaagttctcagccaagaaaagtggt
gtcacagttcaggagattggacgctccctttctcttcctggaaggccagtcccacccacc
atctccacaacatctccttggatataccagcctggttatagctactctagcaaaccaact
gatgggctagagaaagcaaacaagagactaactccttgggaagcagcagcaaagtctcct
cttggtctagtggatgatgcctttaagcccagaaacatccaagaatccattgtggcaaat
gtggtctcagcagctcggaggaaggtgctcccagggccctcagatgattggaataagaga
ctgtcctgtgttcctcaagctcagaaggccagtatgggctcattcgcaaggcaagagtat
aatgttgcatccttacctgataataatatgcccaccaactcccaatatggttcacaggtc
tcatatgcatattataggcagccttccagaaatgattctgaaataatgtccatggaaact
aggtcagattactgtctttcaatagctgattacaactacaacccacacccaaggggatgg
agacgctaa

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