Lynx rufus (bobcat): 124520953
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Entry
124520953 CDS
T08475
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC3
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
124520953
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124520953
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
124520953
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
HECT type E3
124520953
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RCC1
HECT
RCC1_2
Motif
Other DBs
NCBI-GeneID:
124520953
NCBI-ProteinID:
XP_046948050
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGNHSVFLLEDGEVYTCGL
NTKGQLGHEREGNQPEQIGALADQHIVHVACGESHSLALSDRGQLFSWGAGSDGQLGLMT
TEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQAS
PQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEEDRESPCHVKLLR
TQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIA
CGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPVKGYWAAHSGQLSARADRFK
YHIVKQIFSGGDQTFVLCSKYENSSPAVDFRTMNQAHYTSLINDETIAVWRQKLSEHNNA
NTINGVVQILSSAACWNGSFLEKKIDEHFKTSPKIPGIDLNSTRVLFEKLMSSQHSMILE
QILNSFESCLIPQLSSSPPDVEAMRIYLILPEFPLLQDSKYYITLTIPLAMAILRLDTNP
SKVLDNWWSQVCPKYFMKLVNLYKGAVVYLLRGRKTFLIPVLFNNYITAALKLLEKLYKV
NLKVKHVEYDTFYIPEISNLVDIQEDYLMWFLHQAGMKARPSIIQDTVTLCSYPFIFDAQ
AKTKMLQTDAELQMQVAVNGANLQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELS
IHSDIDLKKPLKVIFDGEEAVDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDT
CFVEHNWFHLIGITCGLAIYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQE
LLDYPGEDIEETFCLNFTICRESYGVIEQKKLIPGGDKVTVRKENRQEFVDAYVNYVFQI
SVHEWYTAFSSGFLKVCGGKVLELFQPSELRAMMVGNSNYNWEELEETAIYKGDYSATHP
TVKLFWETFHEFPLEKKKKFLLFLTGSDRIPIYGMASLQIVIQSTASGEEYLPVAHTCYN
LLDLPKYSSKEILSARLTQALDNYEGFSLA
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgttatgttggggatattggtctctgggccaacctgggatcagcaccaacctgcaaggg
attgtggctgagccacaggtgtgtggattcatatcagatagaagcgtcaaggaagtggcc
tgtggaggaaaccactccgtgttcttgctggaggatggggaagtttacacgtgtggtttg
aacaccaaggggcagctgggccatgagagggaaggaaatcagcctgagcaaattggagct
ttggcagatcagcacattgtccacgtggcatgtggtgagtcccacagtctggccctcagt
gaccggggccagctgttttcgtggggtgcagggagtgatggtcaactgggactcatgact
actgaggattcggtggcagtgcccaggttgatacaaaaactgaaccagcagacgatatta
caagtttcctgtggcaactggcattgcttggctcttgcagctgatggtcagttcttcacc
tggggaaagaatagccatgggcagctgggcctggggaaggagttcccctcccaggctagc
ccacagagggtgaggtccctggaaggcatccccctggctcaggtggctgcaggaggagct
catagctttgccctgtctctctcaggagcagtttttggctgggggatgaataatgcaggg
cagctagggctcagtgatgaagaagatcgagagtctccttgccacgtgaaactcttacga
acccaaaaagtcgtctatattagttgtggagaagaacacacagcagtcctcacaaaaagt
ggaggtgtgtttacctttggtgctggttcctgtgggcaacttggacatgattccatgaac
gatgaggttaatccaagaagagttctggagctgatgggcagtgaagtaacgcagattgct
tgtggccgacaacacactctagccttcgtgccttcttctggactcatctatgcattcggt
tgtggagcaagaggtcaattgggaacgggacacacttgtaatgttaagtgcccatcccct
gtgaaaggttactgggctgcccatagtggccagctttcagccagagctgatcgctttaaa
tatcatattgttaagcagatcttctctggaggagaccaaactttcgtactttgctccaaa
tatgagaattcttcccctgctgttgactttaggacgatgaaccaagcacattacaccagt
ctaataaatgatgaaaccatagcagtttggagacaaaaactctcagaacacaacaatgca
aatacaatcaatggtgttgttcagatattatcttctgcagcctgttggaatggaagtttt
cttgaaaaaaaaattgatgaacattttaaaacaagtcccaaaatccctgggattgacctg
aactcaacaagggtgttatttgagaagttaatgagctcccagcactccatgattctagag
cagatcttaaacagctttgaaagttgcctgattcctcagttgtcaagttcaccaccagat
gttgaagccatgagaatctatttaatactacctgagttccccctgctccaggattccaag
tattacataacattgactattcccctggcaatggccattctgcggttggatacaaacccc
agcaaagtattagataactggtggtctcaggtatgcccaaaatatttcatgaagctggta
aacctctataaaggtgcagtcgtgtacctactgagaggaagaaagacattcttaattccc
gtactgtttaacaattatattacagcagctctcaagctcttggagaagttgtataaggta
aatcttaaagtgaagcatgttgaatatgatacattttacattcctgagatttccaatctt
gtggacattcaggaagactacctcatgtggttcttgcatcaagcaggcatgaaggctaga
ccatctataatacaggatactgtaacactttgttcctaccctttcatctttgatgcccaa
gccaagaccaaaatgttacagactgatgctgaactacagatgcaggtggcagtcaacgga
gccaacctgcagaatgtcttcatgcttctcaccttggagcctctgctggccagaagcccc
ttcctggtccttcacgttcgcaggaacaatcttgttggagatgccctaagagagctgagc
attcattccgacattgatttgaaaaagcctctcaaagtaatctttgatggcgaagaagca
gtggatgctggcggtgtcacaaaggagttctttcttttactgttaaaagaacttttgaat
cctatctacggaatgtttacctactatcaggattcaaatctcttgtggttttcagatact
tgttttgtagagcacaactggtttcatttgatcggcataacctgtggactagctatctac
aactccacagtggttgatctccacttcccattggctctctacaagaagttactgaatgta
aagcctggcttggaagatctaaaggagctgtcacccactgaaggaaggagtcttcaagaa
cttttagattaccctggggaagatattgaggagactttctgcctcaatttcacgatttgt
cgagaaagctatggagtgattgaacagaagaagctgatacctgggggagacaaagtgact
gtgcgcaaggaaaacaggcaggaattcgtggatgcttatgtgaattatgtcttccaaatc
tcagttcacgaatggtacacagccttctccagtggcttcctaaaagtgtgtggtggcaag
gtgctcgagctcttccagccttcagaactaagggctatgatggtgggaaacagcaactac
aactgggaagaactagaagagactgccatctacaagggtgattactcagccacacatccc
actgtgaaactattttgggaaacatttcatgaatttccattggaaaagaagaagaagttt
ctcttgttcctgacgggcagtgatcggatccccatctatggcatggcaagcctgcagatc
gtcatccagtccacagccagcggggaggagtacttgcccgtggcccacacttgttacaat
cttcttgatctccccaaatacagcagcaaagagattctgagtgcacggctgacccaggcc
cttgacaactatgaggggttcagtttggcttga
DBGET
integrated database retrieval system
