Lynx rufus (bobcat): 124521321
Help
Entry
124521321 CDS
T08475
Name
(RefSeq) cGMP-gated cation channel alpha-1
KO
K04948
cyclic nucleotide gated channel alpha 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04022
cGMP-PKG signaling pathway
lruf04024
cAMP signaling pathway
lruf04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
124521321
04022 cGMP-PKG signaling pathway
124521321
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
124521321
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124521321
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
124521321
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
CLZ
cNMP_binding
Sec62
Tim54
EMC3_TMCO1
Ion_trans_2
NPR3
SLC52_ribofla_tr
DUF4746
DDHD
Serinc
DUF789
FancD2
Motif
Other DBs
NCBI-GeneID:
124521321
NCBI-ProteinID:
XP_046948375
LinkDB
All DBs
Position
Unknown
AA seq
692 aa
AA seq
DB search
MKKNIINTRFSFINVPNVIVPDIEKEIRRMENGACSSFSDDDDDDDDSASMFEESENETP
HAGDSVRNNSRRRGPTQREHYLPGTIALFNVNNSSNKEQEPKEKKKKKKEKKSKSDDKNV
NKKDSEKKKKKEKEKEKKKKEEKGKDKKEEEKKEVTVIDPSGNTYYNWLFCITLPVMYNW
TMIIARACFDELQSDYLEYWLIFDYLSDIVYLLDMFVRTRTGYLEQGLLVKEEVKLIEKY
KSNLQFKLDFISLIPTDLLYFKLGWNYPEIRLNRLLRISRMFEFFQRTETRTNYPNIFRI
SNLVMYIVIIIHWNACVYFSISKAIGFGNDTWVYPDVNDPEFGRLARKYVYSLYWSTLTL
TTIGETPPPVRDSEFVFVVVDFLIGVLIFATIVGNIGSMISNMNAARAEFQARIDAIKQY
MHFRNVSKDMEKRVIKWFDYLWTNQKTVDEREVLKYLPDKLRAEIAINVHLDTLKKVRIF
ADCEAGLLVELVLKLQPQVYSPGDYICKKGDIGREMYIIKEGKLAVVADDGITQFVVLSD
GSYFGEISILNIKGSKAGNRRTANIKSIGYSDLFCLSKDDLMEALTEYPDAKTMLEEKGR
QILMKDGLLDINVANAGSDPKDLEEKVTRMEGSVDLLQTRFARILAEYESMQQKLKQRLT
KVERFLKPLIDTEFSALEGSGVESGPMDSTQD
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaatattatcaatacacggttctcttttataaacgttcccaatgtgattgtt
ccagatattgaaaaggaaataaggaggatggaaaatggagcatgcagctccttttctgat
gatgatgatgatgatgacgacagtgcctccatgtttgaagagtcagagaatgaaaccccc
catgcaggggattccgttagaaataactcacgcagaaggggaccaacacagagggagcac
tacctgcctggtaccattgcacttttcaacgttaacaacagcagcaataaggagcaagaa
ccaaaagaaaaaaagaaaaagaagaaagaaaagaagagcaagtcagatgataaaaatgta
aataaaaaggactcagagaagaaaaagaagaaagaaaaggaaaaagagaagaaaaagaaa
gaggagaaaggcaaagataagaaagaagaggagaagaaagaagtcacagttattgatccc
tcaggaaacacatactacaactggctgttttgcatcaccttacctgtcatgtacaactgg
actatgattattgcaagagcatgttttgatgaacttcagtctgattacttagaatattgg
ctcatttttgattacctatcagacatagtctatcttcttgatatgtttgtacgaacaagg
acaggttacttggaacaaggactgctggtaaaggaagaggttaaactcatagagaaatat
aaatcaaacttgcaatttaaacttgattttatatcactgataccaactgatctgctgtat
tttaagctagggtggaactatccagaaattagattgaacagactgttaaggatctctcgg
atgtttgaattcttccagagaacagaaacgagaacaaactacccaaacatcttcaggatt
tctaatcttgttatgtatattgtcatcattatccactggaatgcatgtgtgtacttctct
atttccaaagctattggatttggaaatgacacatgggtgtatcctgatgttaatgatcct
gaatttggccgtttggctagaaaatatgtgtacagcctttactggtctacactgactttg
accacaattggtgaaacaccacctcctgtgagggattctgagtttgtctttgtggtggtt
gatttcttaatcggagtgttaatttttgctaccatcgttggtaacataggttctatgatt
tccaacatgaatgctgccagagcagaatttcaagcaagaattgatgcaatcaagcaatat
atgcattttcgaaatgtaagcaaagatatggaaaagagagttattaaatggttcgactat
ctgtggaccaaccaaaaaacggttgatgagagagaagtcttgaagtatctacctgataag
ctgagagcagagatcgccatcaacgttcacttagacacattaaaaaaagtgcgtattttt
gcggactgtgaagctggtctattggtggagttggtcttgaaattacagccccaagtctac
agtcctggagattacatttgcaagaaaggggatatcgggcgagagatgtacatcatcaag
gaggggaaactggctgtggtggcagatgatggaatcactcagtttgtggtattgagtgat
ggtagctactttggtgagatcagcatccttaacattaaaggtagcaaagccggcaatcga
agaacagccaatattaaaagcattggctactcagatctcttctgtctctcaaaagatgac
ctcatggaagctctgactgagtacccagatgccaaaactatgttagaagagaaaggaagg
caaatcctgatgaaagacggcctgctggatataaatgttgcaaatgctggaagtgatcct
aaagatcttgaggagaaggtcacccgaatggaggggtccgtagacctcttgcaaacgagg
tttgctcggatcctggcggagtatgagtcaatgcagcagaaactgaagcaaagactcact
aaggtcgagcgatttctgaaaccacttattgacacagaattttcagctcttgaaggatct
ggagttgaaagtgggcccatggactccacccaggactga
DBGET
integrated database retrieval system
