Lynx rufus (bobcat): 124521568
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Entry
124521568 CDS
T08475
Name
(RefSeq) LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124521568
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lruf03041
]
124521568
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124521568
Spliceosome [BR:
lruf03041
]
Complex A
U2 snRNP components
U2 related factors
124521568
Complex B
124521568
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
KH-I_KHDC4-BBP
FAM176
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
124521568
NCBI-ProteinID:
XP_046948467
LinkDB
All DBs
Position
Unknown
AA seq
1030 aa
AA seq
DB search
MGRESRHYRKWSASRGRSGSRSRSRSPDKRSKRGDDRWSRSRDRDRRRMRSRSRDKRRSR
SRDWKRLRRSRSRERDRSRERRRSRSRDGRCSRSRSRGRRSRSSSPGNKSKKAENRSRSK
EKTNSGESSKEKKKDXDDKEDEKEKDAGNFDQNKLEEEMRKRKERVEKWREEQRKKAMEN
IGELKKEIEEMKQGKKWSLEDDDDDEDDPAEAEKEGNEMEGEELDPLDAYMEEVKEEVKK
FKMRSVKGGGGNEKKSGPTVTKVVTLVTTKKAVVDSDKKKGELMENDQDAMEYSSEEEEV
DLQTALTGYQTKQRKLLEPVDHGKIEYEPFRKNFYVEVPELAKMSQEEVNVFRLEMEGIT
VKGKGCPKPIKSWVQCGISMKILNSLKKHGYEKPTPIQSQAIPAIMSGRDLIGIAKTGSG
KTIAFLLPMFRHIMDQRSLEEGEGPIPVIMTPTRELALQITKECKFSKTMGLRVVCVYGG
TGISEQIAELKRGAEIIVCTPSRMIDMLAANSGWVTNLGRVTYVVLDQADRMFDMGFEPQ
VMRIVDNVHPDQQTVMFSATFPRAMASLARRILSKPIEVQVGGRSVVCSDVEQQVIVIEE
EKKFLKLLELLGHYQELGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSII
NDFKNGTCKLLVATSVAAXGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTF
ITEDQARYAGDIIKALELSGTAVPSDLEKLWSDFKDQQKSEGKIIKKSSGFSGKGFKFDE
TEQALANERKKLQKAALGLQDSDDEDAAVDIDEQIESMFNSKKRVKDMAAPGTSSVPAPT
AGNAEKLEIAKRLALRINAQKNLGIESQVDVMQQATNAILRGGTILAPTVSAKTIAEQLA
EKINAKHNYVPLEKQEEERQDGGQNESFKRYEEELEINDFPQTARWKVTSKEALQRISEY
SEAAVTIRGTYFPPGKEPKEGEWKIYLAIESANELAVQKAKAEITRLIKEELIRLQNSYQ
PTNKGRYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atgggccgggagtcacgccattatcggaagtggtcagcatcaaggggacgctctggaagt
cgatctagaagtcgctcacctgacaaaagaagtaaacgtggagatgacaggtggtccaga
agcagagatagagatagaaggagaatgaggtctcgtagcagggataaaagaagatctcgg
tcaagagactggaagcgcctgaggcgttccagaagtagagagagagatcgaagtcgagag
cgaagaagatctcggagtcgagacgggagatgctccaggagtagaagccgaggccggcga
tccagatcctcaagtcctggcaataaaagcaagaaagctgagaataggtctaggtccaaa
gagaaaacaaatagtggggaaagttctaaagagaagaaaaaagacnnagatgacaaggag
gatgaaaaagaaaaagatgctggtaactttgatcagaataagctggaagaagaaatgagg
aagcgaaaagaacgagtagaaaaatggcgagaggagcaacgtaaaaaggccatggaaaac
attggggaactgaaaaaggaaattgaagagatgaaacaagggaaaaaatggagtttagaa
gatgatgatgatgatgaagatgatcctgcagaagctgaaaaggaaggaaatgaaatggag
ggtgaggagttagatccattagatgcttacatggaagaagtgaaagaggaagtaaaaaag
tttaaaatgcgaagtgtgaagggtggtggagggaatgaaaagaagtctgggccaacagtc
acaaaagttgtcactctagtgacaaccaaaaaagcagtggtagattctgataagaagaaa
ggtgagctaatggagaatgaccaggatgccatggagtattcttcagaggaggaagaagtt
gatcttcagacggcccttacaggctaccagacaaaacagagaaagcttctagaaccagtg
gatcatggaaaaattgaatatgaaccattcagaaaaaacttttatgttgaagttccagaa
ttagcaaaaatgtctcaagaggaggtaaatgtttttcggttggaaatggaaggcattact
gtcaagggaaaaggttgccccaaaccaattaaatcttgggtccagtgtggaatttccatg
aagatcctaaattctctcaaaaagcatggctatgaaaaacccactccaatccagtcccag
gcaattcctgctataatgtctggacgagatttgattggtattgccaagacaggaagcgga
aagaccattgcttttctgttgcccatgtttagacacatcatggatcagaggtctttagaa
gaaggagaggggccaatacctgtcatcatgactccaactcgagaactggctttacaaatt
actaaagaatgtaagttttcaaagaccatgggacttagagtggtctgtgtttatggagga
acaggaatcagtgagcagattgctgagctgaaaagaggtgctgaaattattgtttgcaca
cctagtcgaatgattgacatgttagcagctaatagtggttgggtcacaaatcttggaaga
gtaacatatgttgttttagaccaagcagacagaatgtttgacatgggttttgaaccacag
gtcatgcgcattgtggataatgtccatcctgatcaacagacagttatgttttcagctact
ttccccagagctatggcgtctttggctcgcagaatcctcagtaaacccattgaagtgcag
gttggaggcagaagcgtggtttgctcagatgtggaacaacaagtgattgtgattgaagaa
gaaaagaagttcttgaagttacttgagcttctcggccattatcaagaattgggatctgtc
attatatttgtggataagcaggaacatgcagatggtcttctgaaagatttaatgagagca
tcttatccttgcatgtctcttcatggaggcattgatcaatatgacagagatagcatcata
aatgacttcaagaatgggacctgcaaactcctcgtagccacttctgttgctgcctgaggt
ttagatgtgaaacatctgattcttgtagtaaattacagctgccccaaccattatgaggat
tatgtgcacagagcgggacggactggaagagcaggcaataaaggttatgcgtatactttt
atcacagaagatcaagctcgctatgctggtgacataattaaagctcttgaattgtcagga
actgcggtgccttctgatctggagaaactttggagtgatttcaaagatcagcagaaatct
gaagggaaaataattaaaaagagtagtgggttctctggtaagggattcaagtttgatgaa
acagaacaagctttggctaatgagaggaagaagttgcaaaaagcagctctcggtttgcaa
gattcagatgatgaggacgctgcagtcgacattgatgaacaaattgaaagtatgtttaat
tcaaagaagagagtaaaagatatggctgctcctggaacatctagtgttcctgctccaact
gcgggaaatgctgagaaattagaaatagctaagagactggctcttagaatcaatgctcag
aagaatttgggcattgagtctcaggtagatgtgatgcaacaggccaccaatgcaattctc
agaggcggcaccatcctggctcccactgtgtctgcaaaaaccattgcagagcaacttgct
gaaaagatcaatgctaagcacaattatgtgcctttggagaaacaagaagaggagaggcaa
gatggtggacagaatgaatcttttaaaagatatgaagaagaattagagatcaatgacttc
ccacagactgctaggtggaaagttacctctaaggaagctctgcagagaattagtgaatat
tctgaagctgcagttacaatcagaggaacatatttcccacctggcaaagaacctaaggaa
ggagagtggaaaatttacttggcaattgaaagtgccaatgaactggctgtgcagaaagca
aaggcagaaatcaccagacttataaaagaagaactgatccggctgcaaaattcataccaa
ccaacaaataaaggaagatacaaagtcttataa
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