Lynx rufus (bobcat): 124521853
Help
Entry
124521853 CDS
T08475
Name
(RefSeq) farnesyl pyrophosphate synthase isoform X1
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf00900
Terpenoid backbone biosynthesis
lruf01100
Metabolic pathways
lruf05164
Influenza A
lruf05166
Human T-cell leukemia virus 1 infection
Module
lruf_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
124521853
09160 Human Diseases
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
124521853
05164 Influenza A
124521853
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lruf01006
]
124521853
Enzymes [BR:
lruf01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
124521853
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
124521853
Prenyltransferases [BR:
lruf01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
124521853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
124521853
NCBI-ProteinID:
XP_046948958
LinkDB
All DBs
Position
Unknown
AA seq
420 aa
AA seq
DB search
MPLSRWLRSVGVFWLPAPCWAPQERWLGSLLRPSLVHGGPAPGAWHGARCWCQAWTEEPR
ALYSSLRMNGNQKLDPYAQEKQNFIQHFSQIVKVLTEDGTGHPEIGDAIARLKEVLEYNA
VGGKYQRGLTVLIAYRQLVEPGKRDADSLRRALTVGWCVELLQAFFLVSDDIMDSSLTRR
GQVCWYQKPGIGLDAINDALLLEACIYRVLRLYCREQPYYLNLIELFLQSSYQTELGQTL
DLITAPQGNVDLSRFTEKRYKSIVKYKTAFYSFYLPVAAAMYMAGIDGEKEHASARKILL
EMGEFFQVQDDYLDLFGDPSVTGKIGTDIQDNKCSWLVVQCLQRASPEQRKVLQENYGQK
EAEKVARVKALYEELELPAVFGQYQEDSYGRLMGLIEQHSAPLPPAIFLGLAHKIYKRKK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcccctgtcccgctggctgagatctgtgggggtcttctggctgccagctccctgctgg
gcgccccaggagaggtggctgggttccctcctgcggccctccctggtgcacgggggccca
gccccgggggcctggcacggtgcccgctgctggtgccaagcgtggacagaggagcctcga
gcactttactcctccctcagaatgaatggaaaccagaaattggacccttatgcccaagaa
aagcagaatttcatccagcacttctcccagattgtcaaggtgctgaccgaggatggcacg
ggccacccagagataggagatgccattgcccggctcaaggaggtcctggagtacaacgcc
gtcggaggcaagtaccagcggggcctgacggtgttgatagcctaccggcagctggtggag
cccgggaagcgggatgccgacagtctccggcgggccctgaccgtgggctggtgtgtggag
ctgctccaggctttcttcctggtgtcggacgacatcatggattcatccctcacccggcgg
gggcaggtctgctggtatcagaagccaggcataggtctggatgccatcaatgacgcgttg
cttctggaagcatgtatctaccgcgtgctgaggctctactgccgggagcagccctattac
ctgaacctgattgagctcttcctacagagttcctatcagaccgagctcggacagacgctg
gacctcatcacggccccccagggcaatgtggatctcagcagattcactgaaaagaggtac
aagtccatcgtcaagtataagactgctttctactcgttctatcttcctgtggctgccgcc
atgtacatggcgggcatcgatggggagaaggagcacgccagcgccaggaagatcctgctg
gagatgggggagttcttccaggtgcaggatgattaccttgatctctttggggaccccagt
gtgacaggcaagatcggcacggacatccaggacaacaaatgtagctggctggtggttcag
tgtctgcagcgggcctctccagagcagcgcaaggtccttcaggagaactatgggcaaaag
gaggccgagaaggtggcccgggtgaaggcgctctacgaggagctggagctgccggccgtg
ttcgggcagtaccaagaggacagctacggccgcctgatgggcctcatcgagcagcactct
gcgcccctgcccccggccatcttcctggggctggcgcacaagatctacaagaggaaaaag
tga
DBGET
integrated database retrieval system
