Lynx rufus (bobcat): 124522384
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Entry
124522384 CDS
T08475
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04010
MAPK signaling pathway
lruf04020
Calcium signaling pathway
lruf04721
Synaptic vesicle cycle
lruf04723
Retrograde endocannabinoid signaling
lruf04725
Cholinergic synapse
lruf04726
Serotonergic synapse
lruf04727
GABAergic synapse
lruf04728
Dopaminergic synapse
lruf04930
Type II diabetes mellitus
lruf05016
Huntington disease
lruf05020
Prion disease
lruf05022
Pathways of neurodegeneration - multiple diseases
lruf05032
Morphine addiction
lruf05033
Nicotine addiction
lruf05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
124522384
04020 Calcium signaling pathway
124522384
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
124522384
04725 Cholinergic synapse
124522384
04728 Dopaminergic synapse
124522384
04726 Serotonergic synapse
124522384
04723 Retrograde endocannabinoid signaling
124522384
04721 Synaptic vesicle cycle
124522384
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
124522384
09164 Neurodegenerative disease
05016 Huntington disease
124522384
05020 Prion disease
124522384
05022 Pathways of neurodegeneration - multiple diseases
124522384
09165 Substance dependence
05032 Morphine addiction
124522384
05033 Nicotine addiction
124522384
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
124522384
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124522384
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
124522384
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
124522384
NCBI-ProteinID:
XP_046949752
LinkDB
All DBs
Position
Unknown
AA seq
2330 aa
AA seq
DB search
MVRFGDELGSRYGGAGGERARGGGAGGAGGPGPGGLQPGQRVLYKQSIAQRARTMALYNP
IPVKQNCFTVNRSLFVFSEDNVVRKYAKRITEWPPFEYMILATIIANCIVLALEQHLPDG
DKTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILAT
AGTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIG
LEFYMGKFHKACFPNSTDPEPVGDFPCGKEAPARLCEGDTECREYWPGPNFGITNFDNIL
FAILTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAK
ERERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAAT
KKSRNDLIHAEEGEDRFADLCAVGSPFARASLKSGKTESSSYFRRKEKMFRFFIRRMVKA
QSFYWVVLCVVALNTLCVAMVHYNQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRSY
FRSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWSSLRNLVVS
LLNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQILT
GEDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKD
EEEMEEAANQKLALQKAKEVAEVSPMSAANISIAAAPQNSAKARSVWEQRASQLRLQNLR
ASCEALYSEMDPEERLRYATTRHLRPDMKTHLDRPLVVELGRDGPRGPPGGKARPEGAEA
GEGTDPPRRHHRHRDKAPAAAPAAAAAAAAEQDRADAPKAEGGESGAREERARPHRSRSK
EARNERGRGPGPEGGRRHHRRGSPEEAAEREPRRHRAHRHAPDQGKEGAAPGTKGERRAR
HRGGPRAGPREAGSGEEPARRHRARHKALPTHEDAEKEGEVEDRDKEKELRNHQPKEPRC
DLEASEMMGVGPVHALPSTCLQKVEEQPEDADNQRNVTRMGSQPSDLSATVHIPVTLTGP
PGETTVVPSGNVDLESQAEGKKEVEADDVMRSGPRPIVPYSSMFCLSPTNLLRRFCHYIV
TMRYFEMVILVVIALSSIALAAEDPVRTDSPRNNALKYMDYIFTGVFTFEMVIKMIDLGL
LLHPGAYFRDLWNILDFIVVSGALVAFAFSGSKGKDINTIKSLRVLRVLRPLKTIKRLPK
LKAVFDCVVNSLKNVLNILVVYMLFMFIFAVIAVQLFKGKFFYCTDESKGLERDCRGQYL
DYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSVDATYEEQGPSPG
YRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKNERACIDFAISAK
PLTRYMPQDKQSFQYKTWTFVVSPPFEYFIMAMIALNTVVLMMKFYNAPYEYELMLKCLN
IVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEIAETNNFINLSFL
RLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIGMQVFGNIALD
DDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNQACDEHANANECGSDFAYFY
FVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYDPAACGRISYN
DMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISNEDMTVHFTSTLMALIRTALEIKL
APAGTKQHQCDAELRKEISSVWANLPQKTLDLLVPPHKPDEMTVGKVYAALMIFDFYKQN
KTTRDQIHQATGGLSQMGPVSLFHPLKATLEQTQPAVLRGARVFLRQKSSASLSNGGAVQ
TQESGIKESVSWGTQRTQEVPYEARTPLERGHSTEIPAVHPGKPAVDVQMQSMALRGPDG
EPQPGLESQGRAASMPRLAAETQPAPDASPMKRSISTLAPQRPHVAHLCNAALDRAPASQ
PVPHHHHRCHRRRDRKQKSLEKGPSLSADADGAPSSAAGPGPPPGEGPTGCRRERRQERG
RSQERRQPSSSSSEKQRFYSCDRFGGREPLQPKPSLSSHPTSPTAGQEPGPPRQGGGSVN
GSPLLSTSGASTPGRGGRRQLPQTPLTPRPSVTYKTANSSPVHFAGAQTSLPTFSPGRLS
RGLSEHNALLQRDPLSQPLAAGSRIGSDPYLGQRLDSEDTVRAQPEDTLTFEEAVATNSG
RSSRTSYVSSLTSQSHPLRRVPNGYHCTLGLSSGGRVRHSYHHPDQDHWC
NT seq
6993 nt
NT seq
+upstream
nt +downstream
nt
atggtccgcttcggggacgagctgggcagccgctatgggggcgccggtggggagcgggct
cggggcggcggggccggcggggcgggcggcccgggccccggggggctgcagccgggccag
cgggtcctctacaagcagtcgatcgcgcagcgcgcgcggactatggcgctctacaacccc
atcccggtcaagcagaactgcttcaccgtcaaccgctcgctcttcgtcttcagcgaggac
aacgtcgtccgcaaatacgccaagcgcatcaccgagtggcctccatttgaatacatgatc
ttggccaccatcatcgccaactgtattgtgctggcactggagcagcacctgcctgacggg
gacaagacacccatgtctgagcggctggatgacacggagccctacttcattggcatcttc
tgctttgaggcggggatcaagatcatagctctgggcttcgtcttccacaagggctcctac
ttgcggaacggctggaacgtcatggactttgtggtggttctcacagggatcctggccaca
gcgggcactgactttgacctgcggaccctgcgggctgtgcgtgtgctcaggcccctgaag
ctggtgtctgggattccgagtctgcaggtggtgctcaagtccataatgaaggccatggtc
ccgcttctgcagattgggttgcttctcttctttgccatcctcatgtttgccatcattggc
ctcgagttctacatgggaaaattccacaaggcctgtttccccaacagcacagatccagag
ccagtgggcgactttccctgtggcaaggaggccccagcccggctgtgtgagggtgacacc
gagtgccgggagtactggccgggacccaactttggcatcaccaactttgacaatatcctg
tttgccatcttgacagtgttccagtgcatcaccatggagggatggactgacatcctttat
aacacaaatgacgcagccggcaacacctggaactggctctacttcatccctctcatcatc
atcggctccttcttcatgctcaacctggtgttgggtgtgctctcaggagagtttgccaag
gagcgtgagagggtcgagaaccgccgggccttcctgaagctccgccggcagcagcagatt
gagcgggagctcaatgggtacctggaatggatcttcaaggctgaggaagtcatgctggct
gaggaggacaagaatgcggaggagaagtcccctctggatgtgttgaagagagcagccacc
aagaagagccggaatgacctgatccatgccgaggagggggaggaccggtttgcagacctc
tgtgctgttggatcccccttcgcccgcgccagcctcaagagtgggaagacagagagttcg
tcatacttccgtaggaaggagaagatgttccggttcttcatccgccgcatggtgaaggca
cagagcttctactgggtggtgctgtgtgtggtggccctgaatacgctgtgcgtggccatg
gttcactacaaccagccgcagcggctcaccacggcgctgtactttgcagagtttgttttc
ctgggtctcttcctcacagagatgtccctgaagatgtatggcctggggcccagaagctac
ttccggtcctcattcaactgcttcgactttggggtcattgtggggagcatctttgaagtg
gtctgggccgccatcaagccgggaacctccttcgggatcagcgtgctgcgggcactccgg
ttgctgcggatcttcaaagtcacaaagtactggagctccctgcggaacctggtggtgtct
ctgctcaactccatgaagtctatcatcagcctccttttcctgctgttcctgttcatcgtg
gtctttgccctgctgggcatgcagctgttcgggggacagttcaactttcaagatgagacc
ccgaccaccaactttgacaccttccctgcggccatccttaccgtcttccagatcctaaca
ggagaggactggaatgcagtgatgtatcatgggatcgaatcgcaaggtggagtcagcaaa
ggcatgttctcctctttttatttcattgtcctgacgctgtttggaaattacactctgctg
aatgtcttcctggccatcgccgtggacaacctcgccaacgctcaggagctgaccaaggat
gaagaggagatggaagaagcagccaatcagaagcttgctctgcaaaaggccaaagaagtg
gctgaagtgagccccatgtctgccgcaaacatctctattgctgctgcgccgcagaactcg
gccaaagcacgctcggtctgggagcagagggccagccagctgcggctgcagaacctgcgg
gccagctgcgaggcgctgtacagcgagatggaccccgaggagcggctgcgctacgccacc
acgcgccacctgcggccggacatgaagacgcatctggaccggccgctcgtggtggagctg
ggccgcgacgggccgcggggccccccggggggcaaggcccggcccgagggcgcagaggcc
ggcgagggcacggacccaccccgcaggcaccaccggcaccgcgacaaggccccggcagcg
gccccggcggcggcggcggcggcggcggcggagcaggacagggcagacgccccgaaggcc
gagggcggggagtccggggcccgggaggagcgggcgcggccgcaccgcagccgcagcaag
gaggcccggaacgagcgcggccgcggcccgggccccgagggcggccggcgccaccaccgg
cgcggctccccggaggaggcggccgagcgggagccccggcgccaccgcgcccaccggcac
gcacccgaccagggcaaggagggcgccgcgcccgggaccaagggagagcggcgagcgcgc
caccgcggcggcccccgggccgggccccgggaggccggcagcggcgaggagccggcgcgg
cggcaccgggcccggcacaaggcgctgcccacgcacgaggacgcggagaaggagggcgag
gtcgaggacagggacaaggagaaggagctccggaaccatcagcccaaggagccacgctgt
gacctggaggccagtgagatgatgggtgtgggccctgtacatgcactgcccagcacctgc
ctacagaaggtggaggaacagccagaagacgcagacaatcagcggaatgtcacacggatg
ggcagtcaaccctcggacctgagtgccactgtgcatatcccggtgacgctgaccggccct
cctggggagaccacggttgttcccagtggtaatgtggacctggaaagccaagctgaaggg
aagaaggaggtagaagccgatgacgtgatgaggagtggcccccgacctatcgtcccgtac
agctccatgttctgcttaagccccaccaacctgctccgccgcttctgccattacatcgtg
accatgcggtactttgagatggtcattcttgtggtcatcgccctgagcagcattgccctg
gcagccgaggatcctgtgcggacagactcgcccaggaacaacgctctgaaatacatggac
tacattttcacaggcgtctttacctttgagatggtgataaagatgattgatttgggactg
ctgctgcaccctggggcctacttccgggacctgtggaatattctggacttcatcgtggtc
agtggggccttggtggcatttgccttctcaggatccaaagggaaagacatcaacaccatc
aagtccctgagagtcctgcgcgtcctgcggcccctcaagaccataaaacggctgcctaag
cttaaggccgtgtttgactgtgtggtgaactccctgaagaacgtccttaacatcctggtt
gtctatatgctcttcatgttcatatttgctgtcattgcggtgcagctcttcaaagggaag
tttttctactgcacggatgagtccaaggggctggagagggactgccggggtcagtatttg
gattatgagaaggaggaagtggaagctcaaccacggcagtggaagaaatacgattttcac
tatgacaatgtgctctgggctctgctgacactgttcacagtgtccacgggagaagggtgg
cccatggtcctgaaacactctgtggatgccacctatgaggagcagggcccaagccccggg
taccgcatggagctatccatcttctatgtggtctactttgtggtcttccccttcttcttc
gtcaatatctttgtggccttgattatcatcaccttccaggagcagggggacaaggtgatg
tctgagtgcagcctggagaagaacgagagggcttgcattgactttgccatcagcgccaag
cccctgacacggtacatgccccaggacaagcagtcgttccagtacaagacgtggacgttt
gttgtgtctccgccctttgagtacttcatcatggccatgattgccctcaacacggtggtg
ctgatgatgaagttctacaatgcaccctatgaatacgagctgatgttgaaatgtctgaac
attgtgttcacatccatgttctccatggaatgcgtgctgaagatcatcgcctttggggtg
ctgaactatttcagagatgcctggaatgtctttgactttgtcactgtgttgggaagtatt
actgatattttagtaacagagattgcggaaacgaacaacttcatcaacctcagcttccta
cgcctcttccgtgctgcccggctcatcaagctgctccgccaaggctacaccatccgcatc
ctgctgtggaccttcgtccagtccttcaaggccctgccttacgtgtgtctgctcatcgcc
atgcttttcttcatctatgccatcattggcatgcaggtatttggaaatattgccctggat
gatgacaccagcatcaaccggcacaacaactttcgaacatttttacaagccttgatgctg
ttgttcaggagtgccactggggaggcctggcacgagatcatgctgtcttgtctcagcaac
caggcctgtgatgagcacgccaatgccaacgagtgtgggagcgactttgcctacttttac
ttcgtctccttcatcttcctttgctcctttctgatgttgaacctctttgtggccgtgatc
atggacaattttgagtaccttacacgggactcttccatcttagggcctcaccatctggac
gagttcatccgggtctgggctgagtacgacccggccgcgtgtgggcgcatcagttacaat
gacatgtttgagatgctgaaacacatgtccccgcccctggggctggggaagaaatgccct
gctcgagttgcatacaagcgcctggttcgcatgaacatgcccatctccaatgaggacatg
actgtccacttcacgtccacgctgatggccctcattcggaccgcactggagatcaagctg
gctccagctggcacaaagcagcatcagtgtgatgcagagttgaggaaggagatttcctcc
gtgtgggccaatctgccccagaagaccctggatttactggtgccacctcataaacctgac
gagatgacagtggggaaagtctatgcagctctgatgatatttgacttctacaaacagaac
aagaccaccagagaccagattcaccaggccactggaggcctatcccagatgggccctgtg
tccctcttccaccctctgaaggccaccctggagcagacacagccggccgtgctccgagga
gcccgggtgttccttcggcagaagagctctgcgtccctcagcaacggtggggcagtacaa
acccaagagagtggcatcaaggagtctgtctcctggggcactcagaggacccaggaggta
ccctatgaggcaaggacacccctggagcgtggccactctacagagatcccggcggtgcat
ccaggaaaaccggctgttgatgtccagatgcagagcatggccctgagaggtcctgacggg
gagccccaacctgggctggagagtcagggacgagcggcctccatgccccgcctggctgca
gagacccagccggcccctgacgccagccccatgaagcgctccatctccacgctggcgccc
cagcgcccccatgtggctcatctctgcaacgctgccctggaccgcgccccagccagccag
cccgtgccccatcaccaccaccgctgccaccgccgcagggacaggaagcagaagtccctg
gagaaggggcccagcctgtccgcagacgcagatggcgcacccagcagtgctgcagggccg
gggccacccccgggagaggggcccacaggctgccggcgggagcgtaggcaggagcgtggc
cggtcccaagagcggaggcagccctcttcctcctcctcggagaagcagcgcttctactcc
tgtgaccgctttgggggccgtgagcccctgcagcccaagccctccctcagcagccacccc
acatcaccgacagccgggcaggagccaggacccccgagacagggtggtggttcagtgaat
gggagtcccttgttgtcaacatccggtgctagcacccctggccgcggtgggcggaggcag
ctcccccagactccgctgaccccccgtcccagtgtcacctacaagacggccaactcttcc
cctgtccacttcgctggggcgcagaccagcctccccaccttctcccctggccggcttagc
cgtggcctttctgaacacaacgccctgctccagagagaccccctcagccagcctctggct
gctggctctcggatcggctccgacccttacctggggcagcgtctggacagtgaggacact
gtccgcgcccagcctgaggacacgctcaccttcgaggaggctgtggccaccaactcgggg
cgctcctcccggacttcctatgtgtcctctctgacctcccagtcccaccccctccgtcgc
gtgcccaatggctaccactgcactctgggactcagctcgggcggccgggttcggcacagc
taccaccaccccgaccaagaccactggtgctag
DBGET
integrated database retrieval system
