Lynx rufus (bobcat): 124522432
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Entry
124522432 CDS
T08475
Name
(RefSeq) protein transport protein Sec16A-like isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124522432
Membrane trafficking [BR:
lruf04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
124522432
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
124522432
NCBI-ProteinID:
XP_046949832
LinkDB
All DBs
Position
Unknown
AA seq
2326 aa
AA seq
DB search
MQPPPQAAPSGVVGPPPAGTPQSMFWSNRSYRRQANSNAPVTPITCPLQPVTDPFAFSRQ
ALQTTSSGGSSKSSTPVLQGPAPPAFLQRPGLPVPHANAGDTSQGPVLQATADAGLFASV
LPPSAPPEPELHRSAELAPSSEPEVQTLPCPHIPGAGADSPHGGHPHANVLGPERPLSRQ
NPHDSAVAPSPFFPQPRQQMPGQWGPGQGGPQPSGQHYWPRPEGPVQHPVPHASSVSLFP
APSSPYHGPGHEQLNPLVSLPGPLAGDGSNEPAYLQSGNQSANNFDPDNAFRQNSRAGNP
RASQELRPNPGVNKEQLPDLALVNPLAQGNSPESHLHYPPGAETSRVLPEVDSGALSMFF
HGGETENEENLSSENTSFAGRSDLDGSSPGPGLGHAPARVGAGGVYHAFPRGSSNEATQQ
GGHPQPYFSQSAGAQPDRPATASAAVTVWGGPAGAGAHASSPQYENVEDLEFIQNQEVLP
SEPLSLDPSAPGDPLRYGPRLGVGGHAGGGGPNLEAPDSVPHPVRSDSVSSSYSSKSHRN
LSGAARPQDLGGTFIQQEVGKPEDESSGSFFKQIDSSPVGGETNETTVSQNHRSSLSQPS
TPSPPKPTGKFQTSANSSFEPVKSHLVGVKPVEADRAKVVGEVRGAGPHQKQHRPAAAPP
DTCPGNLEQPPDNMETLFTLQAGSLPFTVPVEAEHGLGHTGGPPSETVLPAAEKRPLARA
QGAVKCESPVTTLWAQNELPDFGGSVLLAPAAPALHAPVRPQPSEVIQPPDEGVSGQQPR
QPGPGLPLQSRDGVGASENLENPPKMGEEEALPSQASSGYASLLSSPPTESLQNQPVLIA
QPDQSYNLAQPINFAVSLSSPNEKSPPWRDALVGDKPTASSRTVGGDSGESAPASGIAAA
SVTRSPLPKSLPQGSFPQVPGTSETVCNQPANLLVQPPPHPVPKNLLPEGQKVHNAENVL
PELVGSPAGSTGVMLVPPANATSVPAGSKADPSGNREETSGALDFTLNRTLENSLRMYGP
SRSDSPACPQTVTGQPRQPGPGAHNPDRFYQQVTKDAQDPCGLGRAQQEPSPAPQQGPRA
TCSEPSNPGSPPVQGQSQNSVPPPASPAPADTGQQLLPRPPRSSSASIVSTSSSQAAARS
DQQWLQPPPPSDLAAYYYYRPLYDGYQSQYPSPYPPDPGTASLYYQQDVYGLYEPRYRSY
DSAVSAYAESYRCPEPERPSSRASHCSDRPPARQGYPEGYYNSKSGWSSHSDYYAGYYSS
QYDYGDAGRWDRYHYGSRFRDPRACDRRYWYDAEYDPYRKENYTYGDRPERYDDPWRYDP
RFTGSFDDDPEPHRDPYGEEADRRSVHSERSAQSLRSSLSSRSRQSQVYRNHGMAATSYE
APPPPDSLPGDYAYGNNFGSVQGFPEYGYPAEAGWPATEQAPSRPTSPEKFSVPHVCARF
GPGGQLIKVIPNLPSEGQPALVEIHSMETLLQHTPDQEEMRSFPGPLGKGDTHKVDVINF
AQNKATKCLQNENLIDKESASLLWNFIVLLCRQNGTVVGTDIAELLLRDHRTAWLPGKSP
NEANLIDFTNEAVGQVEEEESGEAQLSFLTDSHAATTSTLEKETERFRELLLYGRKKDAL
ESAMKNALWGHALLLASKMDSRTHARVMTRFANSLPINDPLQTVYQLMSGRMPAASTCCG
DEKWGDWRPHLAMILSNLSSSVDVESRAMTTMGDTLASKGLLDAAHFCYLMAQVGLGVYT
KKTAKLVLIGSNHSLPFFQFATNEAIQRTEAYEYAQSLGAQTCSFPNFQVFKFIYSCRLA
EMGLATQAFHYCEVIAKTILTQPHAHSPVLISQLAQIASQLRLFDPQLREKPEEESFVEP
AWLVQLQRVEKQVKEGAAPWSLDGALSQRCPSTPSPEAGQHDGPGPAQPGNPLLALPVPS
AERFGQGVRLLPSAPPTLPDSQPALPARVPLFPVPPPPGPAELGPGCGPPGSALGFPEPS
VPEPAALYPGPGLPAGAPSLQESEHLPQEAGSQDPGLMPQEALGRNSLPERREDGFGGKF
AHLGPSGTSQDSEVPPAWERAGPGALQPPLTSTPEGKRPAQAAGKEVKEPKKSSESWLFR
WLPGKKRTEAYLPDDKNKSIVWDEKKNRWVDVNEPEEEKKAPPPPPTSLPKAAQAGPPGP
GGPPRASVNMFSRKAAGARARYVDVLNPGGPQRSEPALAPAEFFAPLAPMPIPTHLFGPN
ADAEEAPPAEGAGREGRAPAGGAINPEPASEPQVLGLPASLPGPELPPAHEDGSKGGEAP
SDHPAAGGASGAAVPFYSPAHFAQASAASGGSRMGRIGQRKYPALS
NT seq
6981 nt
NT seq
+upstream
nt +downstream
nt
atgcagccgccgcctcaggcagccccatcaggcgtggtcgggccacctccggccgggact
cctcagagcatgttctggtccaacagatcttacaggagacaggcaaatagtaacgcaccg
gtgaccccgataacttgcccgttgcagccggtaacggatccgtttgctttcagtagacaa
gcgctacaaactacatcgtcgggcggttcgtccaaaagcagcacgcccgttctgcagggc
ccggccccgccagcgttccttcagcgccctggtctgcctgtgcctcacgcaaatgctggg
gatacctcgcaaggacctgtgttgcaggccacagcggacgccggtctgtttgccagcgtg
ttgccaccttcggcgccgccggagccagagttgcacaggagtgccgagcttgctcccagc
tcggaacccgaagttcagactctgccatgtcctcacattccaggagcgggtgccgacagt
ccccacgggggccatccgcacgcgaacgtgcttgggcccgagagacccctgagtcggcag
aacccgcacgacagtgctgtggcgccgtcccctttcttccctcagcctcgtcagcaaatg
ccagggcagtgggggccagggcagggaggcccacagccctcaggtcaacattattggccc
cgcccagaaggacctgttcagcacccggtgccccacgcctccagcgtttccctcttcccc
gctccgtccagcccgtatcacggtcccggccacgagcagctcaacccactggtgtctttg
ccaggacccttggccggtgacggaagcaatgagccggcctacctgcagagtggtaaccag
tcagcaaataactttgatcctgacaacgcgttcaggcaaaattctagagctgggaatcct
cgggcaagccaggagctcaggccaaatccaggagtgaataaagagcagttgccagacctc
gctcttgtgaatcccctcgctcagggaaacagcccagaaagccatttgcactacccccca
ggggccgagaccagccgggtcctgcccgaagtggactcgggagctctctccatgttcttc
cacggcggagagacggaaaatgaggagaacctctcatctgaaaacacaagcttcgctggt
cggtctgacttggatggctcctcccccggcccgggacttggtcatgctcccgcacgtgtg
ggagcgggtggcgtttaccacgcctttcccagaggttccagcaatgaggccacgcagcag
ggaggccacccgcagccttatttctctcagtctgcaggcgcccagcctgatagaccggcc
acggcaagcgctgccgtcactgtgtggggcggcccagcaggcgcaggggctcacgccagc
agcccacagtacgagaacgtggaggacttagagttcattcagaatcaggaagttttgcca
agtgagcccctaagtttggacccttccgcccccggcgatccgctcagatacggccccagg
ctcggtgttgggggccacgctgggggcgggggcccaaatctcgaggccccggattcagtg
ccacaccccgtgcgatccgacagcgtgtcgtccagctacagcagcaagagccacaggaat
ctttcaggtgcggccaggcctcaagacctggggggcactttcattcagcaagaggtcgga
aaacctgaagatgagtcttcggggagcttttttaagcaaattgattcttctcctgtagga
ggcgagacaaacgagaccaccgtgagccagaatcaccgcagcagcctgtcccagccctca
accccaagccccccaaaacccactggaaaattccagacaagcgcgaatagttcttttgaa
ccggtgaaatcccacttagttggagtgaaaccagttgaggctgatcgggccaaggtggtg
ggcgaggtgaggggggccggaccccaccagaagcagcaccggccagctgccgcaccgcct
gacacctgccctggcaacttggagcagcccccggacaacatggagaccctgttcacactc
caggccggttctctgccctttactgtacccgtagaggccgagcacgggcttgggcacact
ggggggccgccctcggaaaccgtgcttccggcagctgagaagaggcccttggccagggcc
cagggagctgtgaagtgcgagagcccagtgacgaccttgtgggcacagaacgagctcccg
gatttcgggggcagcgtgctcctggccccggctgccccggcactgcacgcgcccgtgagg
cctcagccctctgaagtgatccagcctcctgacgagggagtgtccggtcagcagccccgg
cagccaggccctggcctccctctgcagagcagggacggcgtcggagcttccgagaacctc
gagaaccctcccaagatgggagaagaggaggcccttccctcgcaggcgagctcgggctat
gccagcctgttatcctcaccgcccactgagtctttgcagaatcagccagtcttgattgcc
cagcctgatcaaagctataatttggctcagcccattaattttgctgtgtccttatcgagt
cctaatgagaagagtccgccctggagagatgctttggtgggggataaaccgacagcaagc
agccggactgtcgggggggactccggagaaagcgctcctgcgtctgggatcgcagccgcc
tctgtcacccgctcgcctctgcccaagagtctcccgcaaggtagctttccacaagttcct
ggcacatcggagaccgtttgtaatcaacctgctaatttgctggttcagccgccacctcat
ccggttccaaagaacttgcttccagaaggccaaaaggttcataatgcagagaacgttctt
cccgagctggttggtagccctgctggaagcacaggcgtgatgttggtgccgcctgcaaac
gctacctcggtccctgctggtagtaaagcggatccctccggtaatcgggaagaaacttct
ggagccctagacttcacgctgaataggactctggaaaattctctgaggatgtatggcccg
tcccgttctgacagcccagcttgtccgcaaaccgtcaccggtcagcctagacaacctggg
ccaggggcacataacccagaccgtttctaccagcaggtgacaaaagacgctcaggaccca
tgtggcctagggagggcccagcaggagccgtcgccggccccccagcaagggcccagagca
acatgttcagaaccttcaaacccaggaagcccgccggtgcaggggcagtcccaaaactcg
gtcccgccaccggcaagtcccgctccagctgacacgggtcagcagctgctgcctcggccg
cctcggtcctccagcgcgtccatcgtgtccaccagctccagccaggcagccgcgcggtcg
gaccagcagtggctgcagccgccgcctccctcggacttggcagcttactactattacaga
cccctgtacgatggctaccagtcgcagtacccctcgccatacccgccggatcccggcaca
gcctccctctattaccagcaggacgtctatggcctgtatgagcccagatacaggtcctac
gacagcgcggtgtccgcctacgctgagagctaccgctgccccgagcccgagcggcccagc
tcccgggcaagtcactgctcggaccggccacctgccaggcaaggctatcctgaaggttac
tacaactccaaaagcggatggagcagccacagtgattactatgcgggttactactccagc
cagtatgactacggagatgcgggccgctgggaccgataccactatggctccagattcagg
gacccccgcgcctgtgaccggaggtattggtatgatgcggaatacgatccgtaccggaaa
gaaaactacacttacggggacaggcccgagaggtacgatgacccctggaggtacgaccct
cgcttcactggcagctttgacgacgaccctgagccccacagggacccttacggggaggag
gcggacagacgcagcgtgcacagcgagcgctccgcacagagtctgcgcagcagcctcagc
tcccgctcgcgccagagtcaggtttacagaaatcacggcatggctgctacttcctacgag
gccccgcctcccccagactccttgcccggagattatgcctacggcaacaactttggcagc
gtccagggcttcccggagtacggttaccctgccgaagccggctggcccgcgacggagcaa
gctccatcaagaccaacttctcctgagaaattctcagtgcctcatgtctgtgcccggttt
ggtcctgggggtcagctcattaaagtgattccaaatctgccttcagaaggacagcccgcg
ctggtcgagatccacagcatggagaccttgctgcagcacacgccggaccaggaggagatg
cgctcgttcccgggaccgctcggcaaaggtgacacccataaagtggatgttattaatttt
gcacagaacaaagctacgaaatgtttgcagaatgaaaatttaattgacaaggagtctgcc
agtctcctttggaatttcattgttctcttgtgcaggcagaacgggaccgtggtgggaaca
gacatcgcggaacttctgttacgagaccaccgaacggcatggcttcctgggaagtcaccc
aacgaggccaacctgattgattttactaacgaggcggtgggacaagtggaggaggaggag
tccggggaggcccagctctcgttcctcaccgacagccacgcggccaccaccagcactctc
gagaaggaaactgagaggttccgagagctgctgctctatggacgcaagaaggatgcttta
gaatccgcgatgaaaaatgccttgtggggacatgctctgttgctggcaagcaagatggac
agccggacacacgcccgggtcatgaccaggttcgccaacagtcttccaatcaacgaccct
ctgcagacagtgtaccagctgatgtcgggccggatgcccgctgcgtccacgtgttgcgga
gacgagaagtggggagattggaggccgcatcttgctatgattttgtccaacctgagcagc
agtgtggatgtggagtccagggcgatgaccaccatgggcgacacgctagcttcgaaaggt
ctcttagatgctgcgcacttctgctacctcatggcccaggtcgggttaggggtctatacg
aagaaaaccgcaaaactggttttaattggatcgaatcacagtttgccgtttttccagttt
gcgaccaatgaagccattcagaggacggaggcctatgagtatgcccagtccctcggggca
cagacctgctccttccccaacttccaggtgttcaagttcatctactcctgccgcctggcg
gagatggggctggccacgcaagccttccactactgcgaggtgattgccaagaccatcctg
acgcagccccacgcgcactctccggtgctcatcagccagctggctcagatcgcctcgcag
ttgcggctcttcgaccctcagctgagagagaagccggaggaggagtccttcgtggagccc
gcctggttggtccagctgcagcgcgtcgagaagcaggtcaaggagggcgccgcgccgtgg
agcctggacggggccctctcccagcgctgccccagcacacccagccctgaggccgggcag
cacgacggcccgggacccgcccagccgggcaacccgctgctggcactgcctgtgcccagc
gccgagcgcttcggtcagggcgtgcggctgctgccttcagctccgccgacgctccccgac
agccagccggccctccccgccagggtgccgttgttccccgtgccaccaccccccggccct
gcggagctggggcctggctgcggacccccagggtctgcgcttggctttccagagccctct
gtgcctgagcctgcagctctgtacccgggacctggcctgccagcgggcgcaccgtctctg
caggaaagcgagcacctgccccaggaggccggaagccaggacccagggctgatgccacag
gaggcgcttgggagaaactcgcttccggaacggagagaagatggttttggcggaaaattt
gctcatctgggcccctccgggacgtcccaggactccgaggtccctccggcgtgggagcgt
gctggccccggagccctgcagccgcctctcacgtccacgcccgaagggaagaggcctgca
caggcggccgggaaagaggtcaaggagcctaagaagagcagcgagtcctggttatttcgt
tggctgcccgggaagaaaaggacggaggcttatctgcccgacgacaagaacaagtcgatc
gtctgggatgaaaagaaaaaccgatgggtagatgtaaatgagccagaggaggagaagaag
gctccgcccccaccaccaacctccctccccaaggctgcacaggctgggccccctggtccc
ggtggacccccgagagcctccgtgaacatgttttccaggaaagcagccggagcccgagcg
cgctacgtggacgtcttaaacccggggggcccccagcggagtgaaccggctctcgccccg
gcggagttttttgctcctctggccccgatgccgattcccacccacttgttcggaccaaac
gcagatgcggaggaggccccacccgcagagggggccggcagggaagggcgtgcgcctgcg
gggggggccatcaatccagagcctgcctcagagccccaggtgttaggtttgccagcgtcg
ctccccggccctgagctcccacccgcccacgaggacggttccaagggaggagaggctccc
agtgaccaccccgcagcagggggcgcctccggggcagccgtgcccttctacagccctgct
cactttgcacaggcctctgccgcctcggggggctccaggatggggaggatcggccagagg
aagtacccggcgttgagctag
DBGET
integrated database retrieval system
