Lynx rufus (bobcat): 124522536
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Entry
124522536 CDS
T08475
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03013
Nucleocytoplasmic transport
lruf03015
mRNA surveillance pathway
lruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124522536
09122 Translation
03013 Nucleocytoplasmic transport
124522536
03015 mRNA surveillance pathway
124522536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124522536
03041 Spliceosome [BR:
lruf03041
]
124522536
03009 Ribosome biogenesis [BR:
lruf03009
]
124522536
03012 Translation factors [BR:
lruf03012
]
124522536
Enzymes [BR:
lruf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
124522536
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
124522536
mRNA cycle factors
Stress granule specific factors
124522536
Spliceosome [BR:
lruf03041
]
Complex C
Other components
EJC/TREX
124522536
Ribosome biogenesis [BR:
lruf03009
]
Eukaryotic type
90S particles
Helicases
124522536
Translation factors [BR:
lruf03012
]
Eukaryotic type
Initiation factors
eIF-4
124522536
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_30
AAA_22
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
124522536
NCBI-ProteinID:
XP_046949970
LinkDB
All DBs
Position
Unknown
AA seq
411 aa
AA seq
DB search
MAATATMATSGSARKRLLKEEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEK
PSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQVRETQALILAPTRELAV
QIQKGLLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRA
IKMLVLDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRIL
VKRDELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREA
NFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNREL
YIHRIGRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggcggccacggccacgatggcgacctcgggctcggcgcggaagcggctgctcaaagag
gaggacatgaccaaagtggaattcgagaccagcgaggaggtggacgtgacgcccacgttc
gacaccatgggcctgcgggaagacctgctgcgcggcatctacgcctacggttttgaaaaa
ccgtcagccatccagcagcgagccatcaagcagataattaaaggcagagacgtcatcgct
cagtctcagtctggcacaggcaaaaccgccacgttcagcatctccgtcctccagtgtttg
gatattcaggttcgtgaaacccaggctttgatcttggctccaacgagggagttggctgtg
cagatccagaagggcctgctcgcgctgggcgactacatgaacgtccagtgccatgcctgc
atcgggggcaccaacgtgggggaggacatcaggaagctggactacgggcagcacgtcgtc
gccggcacccccgggcgtgtctttgacatgattcggcgcagaagtttgaggacgcgcgct
atcaagatgttggttttggatgaggctgacgaaatgttgaataaaggtttcaaggagcag
atatacgacgtgtacaggtacctgcccccggccacacaggtggtgctcatcagtgccacg
ctgcctcacgaaatcctggagatgaccaacaagttcatgacggaccccatccgcatcttg
gtgaagcgtgatgaactgaccctagaaggcatcaagcagttttttgtagcggtggagagg
gaagagtggaaattcgataccttgtgtgacctgtacgacacgctgaccatcactcaggcg
gtcatcttctgtaacaccaaacggaaggtggactggctgacggagaagatgcgagaggcc
aacttcacggtgtcgtccatgcacggcgacatgccgcagaaggagcgcgagtccatcatg
aaggagttccggtccggcgccagccgtgtgctcatctccacggacgtctgggccaggggc
ttggacgtccctcaggtgtccctcatcattaactacgacctgcccaataacagagagttg
tacatacacagaatcgggcgctcgggccgctacggccggaagggggtggccatcaacttt
gtgaagaacgacgacatccgtatcctgagagacatcgagcagtactactccacccagatc
gacgagatgcccatgaacgtggctgacctgatctga
DBGET
integrated database retrieval system
