Lynx rufus (bobcat): 124522769
Help
Entry
124522769 CDS
T08475
Name
(RefSeq) transcription intermediary factor 1-beta
KO
K08882
tripartite motif-containing protein 28 [EC:
2.3.2.27
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lruf01001
]
124522769
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124522769
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124522769
Protein kinases [BR:
lruf01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
124522769
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124522769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_5
zf-RING_UBOX
zf-B_box_Trim66
PHD_2
PHD-1st_NSD
zf-C3HC4
Prok-RING_1
YqxI
YaaC
Motif
Other DBs
NCBI-GeneID:
124522769
NCBI-ProteinID:
XP_046950321
LinkDB
All DBs
Position
Unknown
AA seq
832 aa
AA seq
DB search
MAASAAAASAAAAAAASASPGPGEGSAGGEKRAAASSAAAAASASASSPAGGGGEALELL
EHCGVCRERLRPEREPRLLPCLHSACSACLGPPAPAAANSSGDGGAAGDGAVVDCPVCKQ
QCFSKDIVENYFMRDSGSKAATDSQDANQCCTSCEDNAPATSYCVECSEPLCETCVEAHQ
RVKYTKDHTVRSTGPAKSRDGERTVYCNVHKHEPLVLFCESCDTLTCRDCQLNTHKDHQY
QFLEDAVRNQRKLLASLVKRLGDKHATLQKNTKEVRSSIRQVSDVQKRVQVDVKMAILQI
MKELNKRGRVLVNDAQKVTEGQQERLERQHWTMTKIQKHQEHILRFASWALESDNNTALL
LSKKLIYFQLHRALKMIVDPVEPHGEMKFQWDLNAWTKSAEAFGKIVAERPGTNSTGPTP
MAPPRAPGPLSKQGSGSSQPMEVQEGYGFGSDDPYSSAEPHVSGVKRSRSGEGEVSGLMR
KVPRVSLERLDLDLTADSQPPVFKVFPGSTTEDYNLIVIERGAAAAAAGQPGTAPPGAPG
APPLPGMAIVKEEETEAAIGAPPAATEGPETKPVLMALAEGPGAEGPRLASPSGSTSSGL
EVVAPEGTSAPAGGPGALDDSATICRVCQKPGDLVMCNQCEFCFHLDCHLPALQDVPGEE
WSCSLCHVLPDLKEEDGSLSLDGGDSTGVVAKLSPANQQKCERVLLALFCHEPCRPLHQL
ATDSTFSLDQPGGTLDLTLIRARLQEKLSPPYSSPQEFAQDVGRMFKQFNKLTEDKADVQ
SIIGLQRFFETRMNEAFGDTKFSAVLVEPPPLSLPGAGLSAQELSSGPGDGP
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctcggcggcggcggcctcggccgcggcggcggcggcggcctcggccagcccg
ggtccgggcgagggttcggcgggcggcgaaaagcgcgccgccgcctcctcggccgcggct
gcggcctcggcctcggcgtcgtcgcccgcggggggcggtggcgaggcgctggagctcctg
gagcattgcggtgtgtgccgggagcgcctgcgccccgagagggagccgcgcctgctgccc
tgcctgcactcggcctgcagtgcctgcctcgggcctccggcgcccgccgccgccaacagc
tcgggggatggcggtgcggcgggcgacggcgccgtggttgactgtcctgtgtgcaagcag
caatgcttctccaaagacattgtggagaattattttatgcgtgacagtggcagcaaggct
gccacagactcccaggatgcaaatcagtgctgcactagctgtgaggataacgcccctgcc
accagctactgtgtggagtgctctgagccgctgtgtgagacgtgtgtggaggcacaccag
cgggtgaagtacaccaaggaccacactgtgcgctccactgggccagccaagtccagggac
ggtgagcgcacagtgtactgcaacgtgcacaagcacgagccccttgtgctgttctgtgag
agctgtgacaccctcacttgtagagactgccagctcaacacccacaaggaccaccaatat
cagtttctggaggatgcagtgaggaaccagcgcaagctcctggcctcactggtaaaacgc
cttggggacaagcatgcgacgctgcagaagaacaccaaggaggttcgcagctcgatccgc
caagtgtctgatgtacagaagcgtgtgcaggtggatgttaagatggccattttgcagatc
atgaaggaactgaacaagcggggccgtgtgctggtcaacgatgcccagaaggtgacagag
gggcagcaggagcgcctggagcgacaacactggaccatgaccaagatccaaaagcaccag
gaacatatcctgcgctttgcctcgtgggctctggagagtgacaacaacacagctctgctg
ctctccaagaagctgatctatttccagctgcatcgggccctcaagatgattgtggatcct
gtggagccacatggcgagatgaagttccagtgggacctcaatgcctggaccaagagtgca
gaggctttcggcaagatcgtggcagagcgtccaggcaccaactcaacaggccctacgccc
atggcccctcctcgggctccagggcccttgagcaagcagggttctggcagcagccagccc
atggaggtgcaggaaggctatggctttggctcagacgatccttactcgagtgcagagccc
catgtgtcaggtgtgaagcggtcccgctcaggtgagggcgaggtgagtggcctcatgcgc
aaggtgccacgggtgagccttgagcgcctggacctggatctcacggctgatagccagcca
ccagttttcaaagtcttcccaggcagcaccactgaagattacaatctcattgttattgag
cgtggtgctgcagctgctgctgctggacagcctgggactgctccacctggggctcctggt
gcccctccactgcctggcatggccattgtcaaggaggaagagacagaggcggccatcgga
gccccacctgctgccactgaaggccctgagaccaagcctgtgctgatggccctggcggag
ggccccggcgctgagggcccccgcctggcctcacccagtggcagcactagttcaggtcta
gaggtggtggctccagagggcacttcagccccagcaggtggccccggtgccctggatgac
agtgccaccatctgccgcgtctgccagaagccaggcgatctggtcatgtgcaaccagtgc
gagttctgcttccacctggactgccacctgcctgccctgcaggatgtgccaggggaggag
tggagttgctctctctgccatgtgctacctgatctgaaagaggaagatggcagcctgagt
ctggatggtggtgatagcactggtgtggtggccaagctctcgccagccaaccagcagaag
tgtgagcgtgtcctgctggccctgttttgtcacgagccctgccgtcccctgcaccagctg
gctactgactccactttctccctggatcagcctggcggcaccctggacttaaccctgatc
cgcgcccgtctccaggagaagttgtcacctccctatagctccccccaggagtttgcccag
gatgtgggccgcatgtttaagcagttcaacaagctgacagaggacaaggcagatgtgcag
tccatcatcggcctgcaacgcttcttcgagactcgcatgaacgaggcctttggtgacacc
aagttctcagctgtgctggtggagcccccaccgctgagcctgcctggtgctggcctgagt
gcccaggagctatccagtggtcctggtgatggcccctga
DBGET
integrated database retrieval system
