| Entry |
|
|---|
| Name |
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
|
|---|
| KO |
| K11649 | SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C |
|
|---|
| Organism |
|
|---|
| Pathway |
|
|---|
| Brite |
KEGG Orthology (KO) [BR:lruf00001]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
124522969
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
124522969
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
124522969
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:lruf03021]
124522969
03036 Chromosome and associated proteins [BR:lruf03036]
124522969
Transcription machinery [BR:lruf03021]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
124522969
Chromosome and associated proteins [BR:lruf03036]
Eukaryotic type
Chromatin remodeling factors
BAF complex
124522969
PBAF complex
124522969
GBAF(ncBAF) complex
124522969
|
|---|
| SSDB |
|
|---|
| Motif |
|
|---|
| Other DBs |
|
|---|
| LinkDB |
|
|---|
| Position |
Unknown
|
|---|
| AA seq |
1105 aa
MAAAAGGGGLGAAAGAAGAGGAAAAAGLAVYRRKDGGPASKFWESPETVSQLDSVRVWLG
KHYKKYVHADAPTNKTLAGLVVQLLQFQEDAFGKHVTNPAFTKLPAKCFMDFKAGGTLCH
ILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQSNCLTRPSIYLIPDIDLKL
ANKLKDIIKRHQGTFTDEKSKASHHIYPYPSSQEDEEWLRPVMRKDKQVLVHWGFYPDSY
DTWVHSNDVDAEVEDPPIPEKPWKVHARWILDTDVFNEWMNEEDYEVDENRKPVSFRQRI
STKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQASLYGKRRSQKE
EDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLDEQDEETVTTGG
KEDEDPSKGDQSRSLDPGEDNVTEQTNHIIIPSYASWFDYNCIHVIERRALPEFFNGKNK
SKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFLEQWGLVNYQVD
PESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKNKEKPIDLQNFG
LRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILH
FLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALE
EFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDEPEKLEGAEEEK
METDTDVQQPEKAENKGENETDEGDKAQDGENEKHSEKEQDSEVSEDTKSEEKETEENKE
LTDACKERESDLGKKKVEHEISEGNVATAAAAALASAATKAKHLAAVEERKIKSLVALLV
ETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKYAELRARQQMEQ
QQHGQNPQQAHQHSGGPGLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPPHPPQPGQIPGP
GSMIPGQPMPGRMIPTVAANIHPPGSGPAPPGMPPMPGNILGPRVPLTAPNGMYAPPPQQ
PPPPPPPTDGVPPPPAPGPPASAAP |
|---|
| NT seq |
3318 nt +upstreamnt +downstreamnt
atggccgcggcggcgggcggcggcgggctcggggcggcggcgggcgccgcgggcgcggga
ggcgcggcggcggctgcgggcctggccgtttatcggcggaaggacggtggcccggccagc
aagttttgggaaagcccggagacggtgtcccagctggattcggtgcgggtctggctgggc
aagcactacaagaagtatgttcacgcagatgctcctaccaacaaaacgctggctgggcta
gtggtacagcttctccaattccaggaagatgcctttgggaagcatgtcaccaacccggcc
ttcaccaaacttccggcaaaatgtttcatggatttcaaagctggaggcaccttgtgtcac
attcttggggctgcttacaagtataaaaatgaacagggatggcgtaggtttgatctacag
aatccgtctcgaatggatcgtaacgttgaaatgtttatgaatattgaaaaaacattggtg
cagagcaattgtctgaccagacccagcatctacctcattccagacattgatctgaagttg
gctaacaaattgaaagatatcatcaaacgacatcaggggacatttactgatgagaagtca
aaggcttcccaccacatttatccatatccttcctctcaagaggatgaagaatggttgaga
ccggtgatgagaaaagataagcaggtgttagtgcactgggggttttacccagacagctat
gatacttgggtccatagtaatgatgttgatgcagaagttgaagatcccccaattccggaa
aagccatggaaggttcatgcaagatggattttggatactgatgttttcaatgaatggatg
aatgaggaggattatgaggtggatgagaacaggaagcctgtgagttttcgtcagcgaatt
tcaacaaagaatgaagagccagtcagaagtccagagagaagagataggaaagcatcagct
aatgctcgaaagaggaaacattcgccttctcctccacctccaacacccacagaatcccgg
aagaaaagtggaaagaaaggccaagctagtctttatgggaagcgcagaagtcagaaagag
gaagatgagcaagaagatcttaccaaggacatggaagacccaacaccagtacccaacata
gaggaagtggtacttccaaaaaatgtgaacccaaagaaagatagtgaaaatacacctgtt
aaaggaggaactgtggccgatctagatgagcaggatgaagaaacagtgacaacaggagga
aaggaagacgaagatcctagcaaaggtgatcagagtcgttcacttgacccaggagaagat
aatgtgacagagcagaccaatcacattattattcctagttatgcatcatggtttgattat
aactgtattcacgtgattgaacggcgtgctcttcctgaatttttcaatgggaaaaacaaa
tccaagactccagaaatatacttggcatatcgaaattttatgattgacacatatcgccta
aacccccaagaatatttaaccagcactgcttgtcggcgaaacttgactggagatgtgtgt
gctgtgatgagggttcatgcctttttagagcagtgggggcttgtcaattaccaagtggat
ccagaaagtcgacccatggcaatgggacctcctcctactcctcatttcaatgtattagct
gataccccttctgggcttgtgcctctacatcttcgatcacctcaggtccctgctgctcag
cagatgttaaattttcctgagaagaacaaggaaaaaccaattgatttgcagaactttggt
cttcgtactgacatttactccaagaaaaccttagcaaaaagtaaaggtgctagtgctgga
agagaatggactgaacaggagacccttctgctcctggaggccctggagatgtacaaggat
gattggaacaaagtgtcagagcatgtcggaagtcgtactcaggatgaatgcatcctccac
tttctgaggcttcctattgaggacccgtaccttgagaattcggatgcctccctggggccc
ctggcttaccagcctgtccctttcagtcagtcaggaaacccagtcatgagcactgttgct
tttttggcatctgtggtggaccctcgtgtggcatctgctgcagcaaaagcagctttggag
gagttttctcgggtccgagaggaggtaccactggaattggttgaagctcacgtcaagaaa
gtacaagaagcagctcgagcctctgggaaagtggaccccacgtatggcctggagagcagt
tgcattgcaggcacgggacctgatgagccagagaagcttgaaggggctgaggaggaaaaa
atggaaacagataccgatgttcagcagcctgaaaaggcagaaaacaaaggggaaaacgaa
acagatgaaggtgataaagcacaagatggagaaaatgaaaaacatagtgagaaggagcag
gacagtgaagttagtgaggataccaaatcagaagaaaaggaaactgaagagaacaaggaa
ctcactgatgcttgtaaagaaagagaaagtgatctcgggaagaagaaagtagaacatgaa
atttccgaaggaaatgtggccacggccgcagcagctgctcttgcttcagctgcaaccaaa
gccaagcacctggctgccgtggaagagagaaagatcaagtctctggtggccctgctggtt
gagacacaaatgaagaaattggagatcaaactgcgacattttgaggagctggaaactatc
atggacagagagaaggaggctttagaacaacagaggcagcagttgcttactgaacgccag
aacttccacatggaacagctgaaatacgctgaattgcgagcccgacagcaaatggaacag
cagcagcatgggcagaaccctcagcaggcacaccagcactcaggaggacctggcctggca
ccactcggagcagcggggcaccccggcatgatgcctcatcagcagcctcctccctaccct
ctcatgcaccaccagatgccaccacctcatccaccccagccaggtcagataccaggccca
ggttccatgatccctgggcagcccatgccaggccgcatgattcccaccgttgcagccaac
atccacccgcctgggagtggcccagcccctcccggtatgcctccaatgccaggaaacatc
ttaggaccccgggtacccctcacggcacctaacggcatgtatgcccctccgccgcagcag
ccgccaccgcctccgccgcccacggatggagtccctccgcctcctgctccaggcccacca
gcctcggccgccccctag |
|---|
