Lynx rufus (bobcat): 124523318
Help
Entry
124523318 CDS
T08475
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124523318
04131 Membrane trafficking [BR:
lruf04131
]
124523318
04121 Ubiquitin system [BR:
lruf04121
]
124523318
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124523318
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
124523318
Membrane trafficking [BR:
lruf04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
124523318
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
124523318
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-RING_2
Zn_ribbon_6
zf-MIZ
Motif
Other DBs
NCBI-GeneID:
124523318
NCBI-ProteinID:
XP_046951136
LinkDB
All DBs
Position
Unknown
AA seq
491 aa
AA seq
DB search
MDHTDNELQGTNSSGSLGGLDVRRRIPIKLISKQGNKAKTAPRTPRTINRMPAKAPPGDE
EGFDYNEEERYDCKGGELFGNQRRFPGHLFWDFQINILGEKDDTPVHFCDKCGLPIKIYG
RMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQRIEQCTRGSLFMCSIVQGCKRTYLSQR
DLQAHINHRHMRAGKPVPRASLENVHPPIAPPPAEIPDRFIMPPDKHHMSHIPPKQHIMM
PPPPLQHVPHEHYNQPHEDIRAPPAELAMAPPPPRSVSQETFRISTRKHSNLITVPIQDD
SNSGAREPPPPAPAPAHHHPEYQGQPVVSHPHHIMPPQQHYAPPPPPPPPISHPMPHPPQ
ATGTPHLVYSQAPPPPMTSAPPPITPPPGHIIAQMPPYMNHPPPGPPPPQHGGPPVTAPP
PHHYNPNSLPQFTEDQGTLSPPFTQPGGMSPGIWPAPRGPPPPPRMQGPPSQTPLPGPHH
PDQTRYRPYYQ
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggatcacactgacaatgagttacaaggcactaatagttctggatcattgggtggtctt
gatgttcgaagacgaattcctataaagcttatctccaaacaagggaacaaagccaaaact
gcacctcgaactccaaggactataaacaggatgcctgcaaaggctccacctggtgatgaa
gaaggatttgattataatgaagaagaacggtatgactgtaaagggggcgaactgtttgga
aatcagcgaagatttcctggacaccttttttgggacttccagataaacatcttaggtgaa
aaggatgatacgccagttcatttctgtgacaagtgtggattgcctattaaaatctatggg
cgaatgattccgtgcaagcatgtgttttgctatgactgtgcaattttacatgaaaaaaaa
ggagataagatgtgtccaggctgtagtgatcccgttcagcggatcgagcagtgtacgcga
ggttctctcttcatgtgtagcattgttcaagggtgcaagagaacctacctgtctcagaga
gacttacaggcgcatatcaaccaccgccacatgagagctggaaaacctgttccccgtgct
tcacttgaaaacgtccatcctcctatcgccccaccaccagctgaaatccctgatcgtttt
ataatgccgccagacaagcaccacatgagccatattccgccaaagcagcacatcatgatg
ccgccacctccgttgcagcatgtgccacatgagcactataaccagccacacgaggatatc
cgtgctccgccagcagaattggccatggctccacctcctcctcgttcggtcagtcaggaa
acctttcgtatttcaacaagaaaacacagcaatttaataactgtccctattcaggatgac
tccaattcaggtgctagagaaccaccacctcctgccccagcacctgctcaccaccatcct
gaatatcagggccaaccagtggtctcgcaccctcatcatattatgcctccacagcaacat
tacgcaccccccccacctcctccaccaccaataagccatccaatgccacatcctccccag
gccacagggactcctcacttggtttatagccaagctccacctccaccaatgacctctgct
ccaccaccaataacccctccccccggacatattattgcccagatgccaccttatatgaat
catcctcctccaggacctcccccgcctcagcacggcggcccacctgtaactgcaccccct
cctcaccattataatcctaactctctaccccagttcactgaagatcaaggaactctgagc
cctccatttacacaaccaggaggaatgagtcctggtatatggcctgcaccaagagggcca
cctcctcctccacgaatgcagggtccgccttctcaaaccccacttcctggaccacatcat
ccagatcagacaagatatagaccgtattaccaatga
DBGET
integrated database retrieval system
