Lynx rufus (bobcat): 124523515
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Entry
124523515 CDS
T08475
Name
(RefSeq) transcription intermediary factor 1-alpha isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lruf01001
]
124523515
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lruf04121
]
124523515
Enzymes [BR:
lruf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
124523515
Protein kinases [BR:
lruf01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
124523515
Ubiquitin system [BR:
lruf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
124523515
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
PHD-1st_NSD
zf-RING_5
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_2
CRIC_ras_sig
Motif
Other DBs
NCBI-GeneID:
124523515
NCBI-ProteinID:
XP_046951232
LinkDB
All DBs
Position
Unknown
AA seq
1050 aa
AA seq
DB search
MEVAVEKAATAAAAASAAAAGGPSAAPSGENEAESRQGPDSERGGEAARLNLLDTCAVCH
QNIQSRAPKLLPCLHSFCQRCLPAPQRYLMLPAPMLGSAETPPPVPAPGSPVSGSSPFAT
QVGVIRCPVCSQECAERHIIDNFFVKDTTEVPSSTVEKSNQVCTSCEDNAEANGFCVECV
EWLCKTCIRAHQRVKFTKDHTVRQKEEVSPEAVGVTSQRPVFCPFHKKEQLKLYCETCDK
LTCRDCQLLEHKEHRYQFIEEAFQNQKVIIDTLITKLMEKTKYIKFTGNQIQNRIIEVNQ
NQKQVEQDIKVAIFTLMVEINKKGKALLHQLESLAKDHRMKLMQQQQEVAGLSKQLEHVM
HFSKWAVSSGSSTALLYSKRLITYRLRHLLRARCDASPVTNNTIQFHCDPSFWAQNIINL
GSLVIEDKESQPQMPKQNPVVEQNSQPPGGLSSNQLSKFPTQISLAQLRLQHMQQQVMAQ
RQQVQRRPAPVGLPNPRMQGPIQQPSISHQQPPPRLINFQNHSPKPNGPVLPPHPQQLRY
PPNQNMPRQAIKPNPLQMAFLAQQAIKQWQISSGQAAPSTASSTSSTPSSPTITSAAGYD
AKAFGSPMIDLSSPVGGSYNLPSLPDIDCSSTIMLDNIVRKDTSIDHGQPRPPSNRTVQS
PNSSVPSPGLAGPVTMTSVHPPIRSPSASSVGSRGSSGSSSKPAGADSTHKVPVVMLEPI
RIKQENSGPPENYDFPVVIVKQESDEESRPQNTNYPRSILTSLLLNSSQSSTSEESVLRS
DAPDSTGDQPGLHQENSSNGKSEWPDASQKSPVHVGETRKEDDPNEDWCAVCQNGGELLC
CEKCPKVFHLSCHVPTLANFPSGEWICTFCRDLSKPEVEYDCDAPSHNSEKKKSEGLVKL
TPIDKRKCERLLLFLYCHEMSLAFQDPVPLTVPDYYRIIKNPMDLSTIKKRLQEDYSMYT
KPEDFVADFRLIFQNCAEFNEPDSEVANAGIKLESYFEELLKNLYPEKKFPKLEFRNESE
DNKFSDDSDDDFVQPRKKRLKSIEERQLLK
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggctgtggagaaggcggcgacggcggccgcggcggcttcggcggcggccgcc
ggggggccctcggcggcgccaagcggggagaatgaggccgagagtcggcagggccccgac
tcggagcgcggaggcgaggcggcccggctcaacctgttggacacttgcgccgtgtgccac
cagaacatccagagccgggcgcccaagctgctgccctgcctgcactccttctgccagcgc
tgcctacccgcgccccagcgctacctcatgctgcccgcgcccatgctgggctcggccgag
accccgccgcccgtccccgcccccggctcgccggtcagcggctcctcgccgttcgccacc
caagttggagtcattcgatgtccagtttgcagccaagaatgtgcagagagacacatcata
gataatttttttgtgaaggacactactgaggttcccagcagtacagtagaaaagtctaat
caggtgtgtacaagctgtgaggacaatgcagaagctaatgggttttgtgtagagtgtgtt
gagtggctctgcaagacatgcatcagagctcatcaaagagtgaagttcacaaaagaccac
actgtgagacagaaggaggaagtatctccagaggcagttggtgtgaccagtcagcggcca
gtgttttgtccttttcataagaaggagcagctgaagctttactgtgaaacatgtgacaaa
ctgacatgccgggactgccagttattagaacataaagagcatagataccaatttatagaa
gaagcttttcagaatcagaaagtgatcatagatacactaatcacaaaactgatggaaaaa
acaaaatacataaaattcacaggaaatcagatccaaaacaggataattgaagtaaatcaa
aatcaaaagcaggtggagcaggatattaaagttgctatatttacattgatggtagaaata
aataaaaaaggaaaagccctactgcatcagcttgagagccttgcaaaggaccatcgcatg
aaacttatgcaacaacaacaggaagtggccggactttctaaacaattggaacatgtcatg
catttttctaaatgggcagtttccagtggcagcagcacagcattactttatagcaagcga
ctgattacataccggttacggcacctccttcgagcaaggtgtgatgcttccccagtgacc
aacaataccatccagtttcactgtgatcctagtttctgggctcaaaatattatcaattta
ggttctttagtaattgaagataaagagagccagccacaaatgcctaagcagaatcctgtc
gtggaacagaattcacagccaccaggtggtttatcttcaaaccagttatccaagtttcca
acacagatcagcctagctcaattacgactccagcatatgcagcaacaggtaatggctcag
aggcaacaggtgcaacggaggccagcacctgtgggtttaccaaaccctagaatgcagggg
cccatccagcaaccttccatctctcatcagcaaccccctccacgtttgataaatttccaa
aatcacagccccaaacccaatggaccagttcttcctccacatcctcaacagctgagatac
ccaccgaaccagaacatgccgcgacaagcaataaagcccaacccgctacagatggctttt
ttagctcaacaagctataaaacagtggcagatcagcagtgggcaggctgccccatcaacc
gccagcagcacatcctctactccttctagtcctaccattacgagtgcagcaggatatgat
gcaaaggctttcggctcacctatgattgatttgagctcaccagtgggaggctcttataat
cttccttctcttccagatattgactgttcaagtactattatgctggacaatattgtgagg
aaagataccagtatagatcatggccagccaagaccaccctcaaacagaaccgtccagtca
ccaaactcatccgtgccatctccaggccttgcaggacctgttactatgactagtgttcac
ccaccaatacgttcacctagtgcctccagtgttgggagccgaggaagctctggctcttcc
agcaaaccagcaggagctgattccacacacaaagtcccggtggtcatgttggagccaatc
cgaataaaacaggaaaacagtggaccgcctgaaaattatgattttcctgtggtcatagtg
aaacaagaatccgatgaagaatctaggcctcaaaataccaactatccaaggagcatactc
acctccctgctcttaaatagtagtcagagctctacctctgaggagtccgtgctaaggtca
gatgctcctgatagtacaggagatcaacctggacttcaccaggaaaattcctccaatgga
aagtcagagtggccggatgcctcccagaagtcacctgttcatgtcggagagaccaggaaa
gaggatgaccccaatgaggactggtgtgcagtttgtcagaatggaggggagctcctgtgc
tgtgagaagtgtcccaaagtgtttcatctttcttgtcatgtgcccaccttggcaaatttt
ccaagtggagagtggatttgtactttctgccgggacttatctaaaccagaagttgaatat
gattgtgatgctcccagtcacaactcagagaaaaagaaaagtgaaggccttgttaaatta
acaccaatagataaaaggaagtgtgaacgcctacttttatttctttattgccatgaaatg
agcctggcttttcaagatccagttcctctaactgtgcctgattattatagaataattaaa
aatccaatggacttgtcaaccatcaagaagagactacaagaagattattccatgtataca
aagcctgaagattttgtagctgattttagattgatctttcaaaactgtgccgaattcaat
gagcctgattcagaagtagccaatgctggtataaaacttgaaagctattttgaagaactt
ctaaagaacctttatccagaaaaaaagtttcctaaactagaattcaggaatgaatcagaa
gataataaatttagtgatgactcagatgatgactttgtacagccccggaagaaacgcctc
aaaagcatagaggaacgccagttgcttaaataa
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