Lynx rufus (bobcat): 124523735
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Entry
124523735 CDS
T08475
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
124523735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lruf03009
]
124523735
Ribosome biogenesis [BR:
lruf03009
]
Eukaryotic type
Pre-60S particles
RNases
124523735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
124523735
NCBI-ProteinID:
XP_046951550
LinkDB
All DBs
Position
Unknown
AA seq
1211 aa
AA seq
DB search
MLRSTGFFRAIDCPYWAGAPGGPCRRPYCHFRHRGARGPGALVGGGAAPPAAGLGYDPYN
PELPKPPVQRENGALGSGGEPRSDILELELVNQAIEAVRSEVELEQRRYQELLETAREHR
SAEAPAVAPRGPAASPAAGLDEDAFPLSFDYNPGGRPGLLSPDAGYQPTPLATAAEAAGK
YSLAVDRAQGHGGGAGGALEYVPKAVSQPQRYSRPVPSGKYVVDDSKPSTDLEYDPLSNF
SARLLSRASSKDDRAPKRPRGSRGSEPYTPALKKPCDPFAGCDARFSDSDDDAAAPGDGP
VTSSPPRAQAGPEGKAPGKPASREGQETEEGSLRETKEMAVQYDVEDLGQPPKGPGGEPG
AKPASPARVSQDPSGPKEGRPKKKRGGALPAPGRKDGVRRKDRGKDGEQGRPAGKPCADR
RGARAGSPRHRAKQPEGTKKKPSSATPVASSGNSRPDRGGAHQLPSRTGGKTPPGKLAER
KARSLDEGASRDAPKLQKRALSHADLFGDESEDEGLGPGPAAPPALPCLSSSSDSDSDSD
SDRSLGCSPAQGPRKRLKAPQPPCPAPAPAPPSPSSSSSSSGAGGDVDYSALEKEVDFDS
DPLEECLRIFNESTSVKTEDRGRRARQPPKEEKVEAQGHSGLTTLFPGQKRRISHLSKQG
KEAEPGRRGPAPPARPPTAQEVCYRRAQQAQRDSAAWLQATQQPAEKPSSSVHISAPGEK
RRIAHVPNPRLAAAPTGAKRTLAASSGQPPNGPEPGGQPLKARTLSGMASKTTATVTPKR
VAHSPSLQSLKKPIIPKEFGGKVPTVIRQRYLNLFIEECLKFCSSNQEAVEKALNEEKVA
YDRSPSKNIYLNVAVNTLKKLRGLVPSSTPGLNKTSGRRVVSHEMVLGGKLATKTSFSLS
RPSSPRVEDLKGAALYGRLKEYLLTEDQLKENGYPFPHPERPGGAVIFTAEDKKPKDSAC
RICCRCGTEYLVSSSGRCVREEECYYHWGRLRRNRVAGGWETQYTCCSAAIGSAGCQVAK
QHVQDGRKENLEGFVKTFDKELSEDAHPGVYALDCEMSYTTYGLELTRVTVVDTDMRVVY
DTFVKPDNEIVDYNTRFSGVTEADLVDTSISLRDVQAVLLSMFSADTVLIGHSLESDLLA
LKVIHSTVVDTSVLFPHRLGLPYKRSLRNLMADYLRRIIQDNVDGHSSSEDASACMHLVI
WKIREDAKTKR
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgctacgctccaccggtttcttccgggccatcgactgcccctactgggctggggcgccc
ggggggccctgccggcggccctactgccacttccggcaccgtggggcccggggccccggc
gcgctggtcggcggtggagcggcgccccccgcggcagggcttggatatgacccgtacaac
cccgagctgcccaagccccccgtgcagagggagaatggcgccctgggcagcggcggggag
ccccgctcggacatcctggagctggagctggtcaaccaggccatcgaggcggtgcgctcg
gaggtagagctggagcagcggcggtaccaggagctcctggagacggctcgcgagcaccgc
tcggccgaggcccctgccgtggcgccccgaggccccgccgctagtcccgccgcgggcctg
gacgaggacgccttcccgctgtccttcgattacaaccctggcggccgcccgggcctgtta
agccccgatgccggctaccagcccactcccctggccaccgccgccgaggcggccggcaag
tactcgctggctgtggatcgcgctcagggccacggcggaggggctggcggcgccttggag
tacgtgcccaaggctgtgagccagccccagcggtacagccgccctgtccccagcggcaag
tacgtggtggatgactccaagccgtccacggacctggagtatgaccctctgtccaacttc
tctgcccggctgctcagcagggccagctccaaagatgaccgggcccccaagcggccccgg
ggctcccggggtagcgagccctacacgcccgccctcaagaagccctgcgacccctttgcc
ggctgcgacgccaggttctcagactcggatgatgacgccgccgctccgggtgatgggccg
gtcacctcgagccccccgcgagcccaggcgggccccgagggcaaggcccccgggaagcca
gcctccagggagggccaggagaccgaggagggcagcctgcgcgagaccaaggagatggcc
gtgcagtatgacgtcgaggacctcgggcagccccccaagggtcccggtggggagcccggg
gccaagcctgcctccccggccagggtctcgcaggaccccagcggccccaaggaggggaga
cccaagaagaagagaggcggggccctgcccgcccctggccgcaaggacggtgtccggagg
aaggaccggggtaaagacggagagcaggggcggcctgccgggaaaccctgtgcagaccgg
cggggcgcgcgggccggcagcccccggcacagggccaagcagcccgaagggaccaagaaa
aagccatcttcggccaccccggtggccagctcagggaacagccggcccgaccgcgggggt
gcccaccagctgccaagcaggacgggcgggaagacgccgccggggaagctggccgagcgg
aaggcccgctcgctggacgagggtgcctcccgggacgcccccaagctgcagaagcgggcg
ctgagccatgcggacctctttggggacgagagtgaggatgagggcctgggcccggggccc
gcggcaccccccgccctgccctgcctcagctccagctcggactcggactcggactcggac
tcggaccgcagcctgggctgctcccccgctcaggggccgcgcaagcgcctcaaggccccg
cagcccccctgtcctgcccccgcccccgcccccccctccccctcctcctcttcctcctcc
tccggggctggcggggatgtggactactcagctttggagaaggaggtcgactttgactcc
gaccccctggaggagtgtctgcgcatcttcaacgaatccaccagtgtcaagacagaggac
agaggccggcgggcccggcagcctcccaaggaagagaaggtcgaagcccaggggcattcg
ggcctcaccactctgttcccggggcagaagcggaggatttctcatctctccaagcaaggc
aaggaggcagagcccgggaggagaggcccagcgccccctgcccggcctcccaccgcccag
gaggtgtgctaccggcgggcccagcaggcccagagggactccgccgcctggctccaggcc
acccagcagccggccgagaagccgtcgtcctccgtccacatctcggcccccggcgagaag
aggaggatcgcccacgtccccaacccccgcctggctgcagcccccacaggtgccaagagg
accctcgccgccagcagcggccagcctcccaatggccccgaaccgggcggccagcccctg
aaggcgcgcacgctgtccggcatggcgtccaagaccaccgccaccgtcacccccaagcgt
gttgcccacagcccgtctttacagagtttaaagaagcccattatcccaaaagagtttggg
ggcaaggtccccaccgtcatccgccagcggtatctcaacctgtttattgaggagtgtctc
aaattctgctcttcaaaccaggaagccgtagagaaggcgctgaacgaggagaaggtggcc
tacgaccgcagccccagcaagaacatctatctgaacgtagctgtgaataccctcaagaag
ctccggggcctggtccccagctccacacctggtctcaacaaaaccagcggccggagggtt
gtgtcccacgagatggtgctggggggcaagttggccaccaaaaccagcttctcactcagc
cgcccgagcagcccccgggtggaggatctgaaaggggccgccctgtatggccgcctcaag
gaatacctgctcaccgaggaccagctcaaggagaacggctaccccttccctcaccccgag
cggccggggggcgcagtcatcttcacggccgaggacaagaagcccaaggactccgcctgt
agaatctgctgccgctgtggcaccgagtacctggtgtcctcatccggccgctgcgtgcgc
gaagaggagtgttactaccactgggggcggctccgccggaaccgagtggctggcggctgg
gagactcagtacacgtgctgctcggctgccattggctctgccggctgtcaggtcgccaag
caacatgtgcaggacggccggaaggagaacctggaaggctttgtgaaaacttttgacaaa
gagctttcggaagatgctcacccgggcgtttatgcccttgactgtgaaatgtcctacacc
acgtatggcctggagctgacgcgcgtcacggtggtggacacagacatgcgggtggtctac
gacacctttgtcaagccggacaacgagatcgtcgactacaacaccaggttttcaggggtc
actgaggctgacctcgtggacacgagcatctcgctccgggatgtccaggccgtcctgctg
agcatgttcagcgctgacaccgtcctcatcggacacagcctggagagcgacctgctggcc
ttgaaggtcattcacagcaccgtggtggacacgtccgtgctcttcccgcaccgcctgggc
ctcccctacaagcgctccctgcggaacctcatggctgactacctcagacggatcatccag
gacaacgtggacgggcacagctccagcgaggacgccagcgcctgcatgcacctggtgatc
tggaagatccgagaagacgccaagaccaagcggtga
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integrated database retrieval system
