KEGG   Lynx rufus (bobcat): 124523760
Entry
124523760         CDS       T08475                                 
Name
(RefSeq) RAF proto-oncogene serine/threonine-protein kinase isoform X1
  KO
K04366  RAF proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf01521  EGFR tyrosine kinase inhibitor resistance
lruf01522  Endocrine resistance
lruf04010  MAPK signaling pathway
lruf04012  ErbB signaling pathway
lruf04014  Ras signaling pathway
lruf04015  Rap1 signaling pathway
lruf04022  cGMP-PKG signaling pathway
lruf04024  cAMP signaling pathway
lruf04062  Chemokine signaling pathway
lruf04068  FoxO signaling pathway
lruf04071  Sphingolipid signaling pathway
lruf04072  Phospholipase D signaling pathway
lruf04140  Autophagy - animal
lruf04150  mTOR signaling pathway
lruf04151  PI3K-Akt signaling pathway
lruf04210  Apoptosis
lruf04218  Cellular senescence
lruf04270  Vascular smooth muscle contraction
lruf04360  Axon guidance
lruf04370  VEGF signaling pathway
lruf04371  Apelin signaling pathway
lruf04510  Focal adhesion
lruf04540  Gap junction
lruf04550  Signaling pathways regulating pluripotency of stem cells
lruf04613  Neutrophil extracellular trap formation
lruf04625  C-type lectin receptor signaling pathway
lruf04630  JAK-STAT signaling pathway
lruf04650  Natural killer cell mediated cytotoxicity
lruf04660  T cell receptor signaling pathway
lruf04662  B cell receptor signaling pathway
lruf04664  Fc epsilon RI signaling pathway
lruf04666  Fc gamma R-mediated phagocytosis
lruf04720  Long-term potentiation
lruf04722  Neurotrophin signaling pathway
lruf04726  Serotonergic synapse
lruf04730  Long-term depression
lruf04810  Regulation of actin cytoskeleton
lruf04910  Insulin signaling pathway
lruf04912  GnRH signaling pathway
lruf04914  Progesterone-mediated oocyte maturation
lruf04915  Estrogen signaling pathway
lruf04916  Melanogenesis
lruf04917  Prolactin signaling pathway
lruf04919  Thyroid hormone signaling pathway
lruf04921  Oxytocin signaling pathway
lruf04926  Relaxin signaling pathway
lruf04928  Parathyroid hormone synthesis, secretion and action
lruf04929  GnRH secretion
lruf04935  Growth hormone synthesis, secretion and action
lruf05010  Alzheimer disease
lruf05022  Pathways of neurodegeneration - multiple diseases
lruf05034  Alcoholism
lruf05132  Salmonella infection
lruf05152  Tuberculosis
lruf05160  Hepatitis C
lruf05161  Hepatitis B
lruf05163  Human cytomegalovirus infection
lruf05164  Influenza A
lruf05165  Human papillomavirus infection
lruf05167  Kaposi sarcoma-associated herpesvirus infection
lruf05170  Human immunodeficiency virus 1 infection
lruf05200  Pathways in cancer
lruf05205  Proteoglycans in cancer
lruf05206  MicroRNAs in cancer
lruf05207  Chemical carcinogenesis - receptor activation
lruf05208  Chemical carcinogenesis - reactive oxygen species
lruf05210  Colorectal cancer
lruf05211  Renal cell carcinoma
lruf05212  Pancreatic cancer
lruf05213  Endometrial cancer
lruf05214  Glioma
lruf05215  Prostate cancer
lruf05218  Melanoma
lruf05219  Bladder cancer
lruf05220  Chronic myeloid leukemia
lruf05221  Acute myeloid leukemia
lruf05223  Non-small cell lung cancer
lruf05224  Breast cancer
lruf05225  Hepatocellular carcinoma
lruf05226  Gastric cancer
lruf05230  Central carbon metabolism in cancer
lruf05231  Choline metabolism in cancer
lruf05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    124523760
   04012 ErbB signaling pathway
    124523760
   04014 Ras signaling pathway
    124523760
   04015 Rap1 signaling pathway
    124523760
   04370 VEGF signaling pathway
    124523760
   04371 Apelin signaling pathway
    124523760
   04630 JAK-STAT signaling pathway
    124523760
   04068 FoxO signaling pathway
    124523760
   04072 Phospholipase D signaling pathway
    124523760
   04071 Sphingolipid signaling pathway
    124523760
   04024 cAMP signaling pathway
    124523760
   04022 cGMP-PKG signaling pathway
    124523760
   04151 PI3K-Akt signaling pathway
    124523760
   04150 mTOR signaling pathway
    124523760
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    124523760
  09143 Cell growth and death
   04210 Apoptosis
    124523760
   04218 Cellular senescence
    124523760
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124523760
   04540 Gap junction
    124523760
   04550 Signaling pathways regulating pluripotency of stem cells
    124523760
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    124523760
 09150 Organismal Systems
  09151 Immune system
   04613 Neutrophil extracellular trap formation
    124523760
   04625 C-type lectin receptor signaling pathway
    124523760
   04650 Natural killer cell mediated cytotoxicity
    124523760
   04660 T cell receptor signaling pathway
    124523760
   04662 B cell receptor signaling pathway
    124523760
   04664 Fc epsilon RI signaling pathway
    124523760
   04666 Fc gamma R-mediated phagocytosis
    124523760
   04062 Chemokine signaling pathway
    124523760
  09152 Endocrine system
   04910 Insulin signaling pathway
    124523760
   04929 GnRH secretion
    124523760
   04912 GnRH signaling pathway
    124523760
   04915 Estrogen signaling pathway
    124523760
   04914 Progesterone-mediated oocyte maturation
    124523760
   04917 Prolactin signaling pathway
    124523760
   04921 Oxytocin signaling pathway
    124523760
   04926 Relaxin signaling pathway
    124523760
   04935 Growth hormone synthesis, secretion and action
    124523760
   04919 Thyroid hormone signaling pathway
    124523760
   04928 Parathyroid hormone synthesis, secretion and action
    124523760
   04916 Melanogenesis
    124523760
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    124523760
  09156 Nervous system
   04726 Serotonergic synapse
    124523760
   04720 Long-term potentiation
    124523760
   04730 Long-term depression
    124523760
   04722 Neurotrophin signaling pathway
    124523760
  09158 Development and regeneration
   04360 Axon guidance
    124523760
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124523760
   05206 MicroRNAs in cancer
    124523760
   05205 Proteoglycans in cancer
    124523760
   05207 Chemical carcinogenesis - receptor activation
    124523760
   05208 Chemical carcinogenesis - reactive oxygen species
    124523760
   05230 Central carbon metabolism in cancer
    124523760
   05231 Choline metabolism in cancer
    124523760
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    124523760
  09162 Cancer: specific types
   05210 Colorectal cancer
    124523760
   05212 Pancreatic cancer
    124523760
   05225 Hepatocellular carcinoma
    124523760
   05226 Gastric cancer
    124523760
   05214 Glioma
    124523760
   05221 Acute myeloid leukemia
    124523760
   05220 Chronic myeloid leukemia
    124523760
   05218 Melanoma
    124523760
   05211 Renal cell carcinoma
    124523760
   05219 Bladder cancer
    124523760
   05215 Prostate cancer
    124523760
   05213 Endometrial cancer
    124523760
   05224 Breast cancer
    124523760
   05223 Non-small cell lung cancer
    124523760
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    124523760
   05161 Hepatitis B
    124523760
   05160 Hepatitis C
    124523760
   05164 Influenza A
    124523760
   05163 Human cytomegalovirus infection
    124523760
   05167 Kaposi sarcoma-associated herpesvirus infection
    124523760
   05165 Human papillomavirus infection
    124523760
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    124523760
   05152 Tuberculosis
    124523760
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    124523760
   05022 Pathways of neurodegeneration - multiple diseases
    124523760
  09165 Substance dependence
   05034 Alcoholism
    124523760
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    124523760
   01522 Endocrine resistance
    124523760
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:lruf01001]
    124523760
Enzymes [BR:lruf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.1  non-specific serine/threonine protein kinase
     124523760
Protein kinases [BR:lruf01001]
 Serine/threonine kinases: TKL group
  RAF family [OT]
   124523760
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr RBD C1_1 Kinase-like ABC1 zf-RING-like Pkinase_fungal C1_2
Other DBs
NCBI-GeneID: 124523760
NCBI-ProteinID: XP_046951592
LinkDB
Position
Unknown
AA seq 648 aa
MEHIQGAWKTISNGFGFKDAVFDGPSCISPTIVQPFGFQRRASDDGKLTDSSKTSNTIRV
FLPNKQRTVVNVRNGMSLHDCLMKALKVRGLQPECCAVFRLLHEHKGKKARLDWNTDATS
LIGEELQVDFLDHVPLTTHNFARKTFLKLAFCDICQKFLLNGFRCQTCGYKFHEHCSTKV
PTMCVDWSNIRQLLLFPNSPIGDSGVPALPSLTMRRMRESVSRMPVSSQHRYSTPHAFTF
NSSSPSSEGSLSQRQRSTSTPNVHMVSTTLPVDSRMIEDAIRSHSESASPSALSSSPNNL
SPTGWSQPKTPVPAQRERAPGSGTQEKNKIRPRGQRDSSYYWEIEASEVMLSTRIGSGSF
GTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIV
TQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGL
TVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYE
LMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFP
QILSSIELLQHSLPKINRSASEPSLHRAAHTEDINACTLTTSPRLPVF
NT seq 1947 nt   +upstreamnt  +downstreamnt
atggagcacatacaaggggcctggaagacgatcagcaatggctttggattcaaagatgca
gtgtttgatggccccagctgcatctcccctacaatagttcagccatttggctttcagcgt
cgggcatcagatgatggcaaacttacggactcttctaagacaagcaacactatccgtgtt
ttcttgccaaacaagcaaagaacagtggtcaatgtgagaaatggaatgagcttgcatgat
tgccttatgaaagcactcaaggtgaggggcctgcagccggagtgctgtgcagtgttcaga
cttctccatgaacataaaggtaaaaaagcgcgtttagattggaatactgatgccacctcg
ttgattggagaagaacttcaagtagatttcctggatcacgttcccctcacaacacacaac
tttgctcggaagaccttcctgaagcttgccttctgtgacatctgtcagaagttcctgcta
aatggatttcgatgtcagacttgtggctacaaatttcatgagcactgtagcaccaaagta
cctactatgtgtgtggactggagtaatatcagacaactcttattgttcccaaattctcct
attggtgatagtggggtcccagcactgccttctttgacaatgcgtcggatgcgagagtct
gtttcccggatgcctgttagttcccagcacagatactccacaccccacgccttcacgttc
aactcttccagcccttcctctgaaggttccctctcccagaggcagaggtcaacatccaca
cctaatgtccacatggtcagcaccaccctgcctgtggacagcaggatgattgaggatgca
attcgaagccacagtgaatcagcctcaccttcagccttgtccagcagccctaacaatctg
agcccaacgggctggtcacagcccaaaacccctgtgccagcacagagagagagggcacca
ggatctgggacccaggagaaaaacaaaatcaggcctcgtggacagagagattcaagctat
tactgggaaatagaagccagcgaagtgatgctttccactcggattggatcaggctcattt
ggaacggtgtataagggcaagtggcatggagatgttgcagtgaaaattctgaaagttgtc
gaccccacgccagagcagttccaggccttcaggaatgaggtggctgtcctacgcaaaaca
cggcacgtgaacatcctgctctttatgggctacatgacaaaggacaacctggcaattgtg
acccagtggtgcgagggcagcagcctctacaaacacctgcatgtccaggagactaagttc
cagatgttccagttgattgacatcgcccgccagactgctcagggaatggactatttgcat
gcaaagaatatcatccacagagacatgaaatccaacaatatatttctccatgaaggcctg
acggtgaaaattggagattttggtttggcaacagtaaagtcgcgctggagcggttctcag
caggtcgaacaacccactggctctgtcctgtggatggcccccgaggtgatccgaatgcag
gataataacccattcagcttccagtctgatgtctactcctacggcattgtgctctatgag
ctcatgacaggggagcttccttactcccacatcaataaccgcgaccagatcatcttcatg
gtgggccgaggatatgcctccccagacctcagtaagctatataagaactgccccaaagca
atgaagaggcttgtagctgactgtgtgaagaaggttaaggaagagaggcctctttttccc
cagatcctgtcttccatcgagcttctccaacactctctgccgaaaatcaaccggagtgct
tctgagccatccctgcaccgggcggcccacactgaggatatcaacgcctgcacgttgacc
acatcccctagactgcctgtcttctag

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