Lynx rufus (bobcat): 124523921
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Entry
124523921 CDS
T08475
Name
(RefSeq) DNA repair protein complementing XP-C cells-like
KO
K10838
xeroderma pigmentosum group C-complementing protein
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
124523921
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lruf03400
]
124523921
DNA repair and recombination proteins [BR:
lruf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
124523921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BHD_3
Rad4
BHD_1
BHD_2
Transglut_core
zf-B_box
Motif
Other DBs
NCBI-GeneID:
124523921
NCBI-ProteinID:
XP_046951816
LinkDB
All DBs
Position
Unknown
AA seq
944 aa
AA seq
DB search
MVRKRAAGREPQGREPCGRKAKGKSTARREEKEADVLQDEKPLKGSLLSKVSRETRKRGC
SDPGGPAHSPAKRKAAKVTVKSENAEVKDEALSDGEDFRDFASAPKKAHHPKREAAVDKG
SCEGDEEEESDDDWEEVEELSEPVPSDAGENAAFSKSALPVKPVEIEIETPQQAKARERS
ERIKMEFETYLRRMMNRFSKEVREDTHKVHLLCLLANGFYRSNICSQPDLLAIGLSIIPA
RFTKVPPQDVDACYLSNLVKWFIGTFTVNADLSTNEQDGLQTTLERRFAIYSARDDEELV
HIFLLILRALQLPTRLVLSLQPVPLKLPTAKGKKASKERSTEGPGGSLETSSPVPENQAK
PKSGKGTGQEGTPSAGTGSPSARGKRSKAAAVGKKRRGPSSSEEEERKAGGQEEGPRRRR
QGRERQVASRVSYKEESGSERGSSGSDFEPSSGEARHSSDEDSEPGLPRQRRAPGPQRTK
AGSKSDSRTHRGRHPRRSGFPAASTSSSSSKSKRGKKISSDGEGAQRGTAAGRDQWLEVF
CEQEEKWVCVDCVHGVVGQAVACYKYATKPMTYVVGIDGDGWVRDVTQRYDPAWMTTTRK
CRVDAKWWAETLRPYQSPLVEREKKEDSEFQAKHLGQPLPTVIGTYKNHPLYALKRHLLK
YEAIYPETAAILGYCRGEAVYSRDCVHTLHSRDTWLKQARVVRLGEVPYKMVKGYSNRAR
KARLAEPQLQDQNDLGLFGRWQTEEYQPPVAVDGKVPRNEFGNVYLFLPSMMPVGCVQLN
LPNLHRIARKLDIDCVQAITGFDFHKGYSHPITDGYIVCEEYKDVLLAAWENEQALIEKK
EKEKREKRALGNWKLLVKGLLIREKLKIRYGDKSEAVAAQAHAGGGLSSDEEEGTSSQAE
ASRILAASWPQNREAEEEQKPQCPKKTKREKKAAASHLFPFEKL
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggttcggaagcgtgcggccggtagggagccgcagggacgtgaaccgtgcggccggaag
gccaagggcaagagcacggcccggcgtgaggagaaggaggcggatgtcttgcaagatgag
aaacctctaaaggggagccttctctccaaagtctcacgagaaacgaggaagagaggttgc
agtgatcccgggggccccgcacacagtccagccaaaaggaaggcggccaaggtgactgtt
aaatctgaaaatgccgaggtgaaggatgaagctctcagcgatggggaggacttcagggac
tttgcaagtgcccccaagaaggcacaccatccaaagagagaggctgctgtggacaaaggc
agctgtgaaggagacgaggaggaagaaagtgacgatgattgggaagaggtagaagaactt
agtgagcctgtgccgagtgatgcaggagaaaatgcagccttctctaaatctgccctgcct
gtgaagccagtggagatagaaattgaaacaccccagcaggcaaaagccagagaaagaagt
gaaaggataaaaatggagtttgagacatatcttcggaggatgatgaaccgtttcagtaaa
gaagtccgtgaggacacacacaaggttcacctgttgtgcctgctggcaaatggtttctat
cgcagtaacatctgcagccagccagatctgcttgccattggcctgtccatcatcccagct
cgctttaccaaagtgccacctcaggatgtggatgcctgctacctgtcgaacctggtgaaa
tggttcattggaacatttacagttaatgcagacctttcaaccaacgagcaagatggccta
cagaccacattggaaaggagatttgctatttactctgcgcgggatgatgaagagttggtc
cacatatttttactgattctccgggccctgcagctccccacccgactggtattgtctctg
cagccggttcctctgaagttacctacagcaaagggaaagaaagcttccaaggagagatct
acagagggtcccggaggctccttggaaacttccagcccagttccggaaaaccaagctaaa
cccaagagcggcaaggggaccggacaagagggcactccttctgcgggcactggcagtccg
agcgccagagggaagaggagcaaggcagccgcggttgggaagaaacggcgtgggccctcc
tccagtgaggaagaggagcgcaaggcgggggggcaggaggagggcccccggagacgtcgg
cagggccgggaacggcaggtggcctccagggtgtcgtacaaagaggagagtgggagtgag
aggggcagcagtggctctgacttcgagccatccagtggggaagcccgtcattcatccgat
gaggattctgagcctggccttcccaggcagaggagggccccgggcccccagaggacaaag
gcagggtctaagagtgactccaggacccaccgtggaaggcaccctaggcgctctggcttt
ccggcagcgtccacgagctcttcgagcagtaagagcaagcgaggcaagaaaatctccagt
gatggtgagggggcacagagagggacagcagccggcagagaccagtggctggaggtgttc
tgtgagcaggaggaaaagtgggtgtgtgtggactgtgtgcacggtgtggtgggccaggcc
gtggcctgttacaagtacgccaccaagcccatgacctacgtggtgggcatcgacggtgac
ggctgggtccgggatgtcacccagaggtacgacccagcctggatgaccacaacccgcaag
tgccgagttgatgccaagtggtgggctgaaaccttgagaccgtatcagagcccgttggtg
gagagggagaagaaggaggactcagagtttcaggcaaagcacctgggccagcctttgcca
acggtcattggcacgtataagaaccaccctctgtacgccctgaagaggcatctcctgaaa
tacgaggccatctaccccgagacagccgccattctggggtattgtcgaggagaggctgtc
tactccagggattgcgtgcataccctgcactcccgggacacgtggctgaaacaagctaga
gtggtgaggctgggagaagtgccctacaagatggtgaagggctattccaaccgggcccgg
aaagcccgcctcgccgagccccagctgcaggaccaaaatgacctgggtctgtttggcagg
tggcagacggaggagtaccagccccctgtggctgtggacggcaaggtcccccggaatgaa
tttgggaacgtgtacctcttcctgcccagcatgatgcctgtcggctgtgtccagctgaac
ctgcccaacctgcaccgcatagcccgcaagctggacattgactgtgtccaggccatcact
ggcttcgacttccataaaggctactcccatcccataactgacggctacattgtctgtgag
gaatacaaagacgtgctcctggctgcctgggaaaatgagcaggcactcatcgaaaagaag
gagaaggagaaaagggagaagcgggccctcgggaactggaagctgctggtcaaaggactg
ctcatcagggagaagctgaagattcgctacggggacaagagtgaggccgtcgctgcccag
gcacatgcgggaggtggactctcttctgatgaagaggaggggaccagctctcaagcagaa
gcgtccaggatcctggctgcctcctggccccaaaaccgagaggctgaagaggagcagaag
ccacagtgccctaagaagaccaaaagggaaaagaaagcggcagcctcccacctgttccca
tttgagaagctgtga
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