Lynx rufus (bobcat): 124523931 Help Entry 124523931         CDS       T08475                                  Name (RefSeq) pre-mRNA-splicing factor SYF1   KO K12867   pre-mRNA-splicing factor SYF1 Organism lruf  Lynx rufus (bobcat) Pathway lruf03040   Spliceosome Brite KEGG Orthology (KO) [BR:lruf00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     124523931  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lruf03019]     124523931    03041 Spliceosome [BR:lruf03041]     124523931 Messenger RNA biogenesis [BR:lruf03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     Other transport factors      124523931 Spliceosome [BR:lruf03041]  Complex B   Other components    Prp19-related factors     124523931  Complex C     124523931 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  HAT_Syf1_CNRKL1_C HAT_Syf1_M HAT_Syf1_CNRKL1_N HAT_PRP39_C HAT_PRP39_N TPR_14 TPR_12 TPR_2 TPR_8 Suf TPR_19 TPR_15 ARM_TT21 ARM_TT21_C TPR_1 TPR_NPHP3 Motif Other DBs NCBI-GeneID:  124523931 NCBI-ProteinID:  XP_046951826 LinkDB All DBs Position Unknown AA seq 855 aa AA seqDB search MVVMARLSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL MDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA QFEESMIAAKMETASELGREEEDDVDLELRLARFEQLIGRRPLLLNSVLLRQNPHHVHEW HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA AEAERDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGGDEDEDEMDLEPNEVRLE QQSVPAAVFGSLKED NT seq 2568 nt NT seq  +upstreamnt  +downstreamnt atggtggtgatggcgcgtctttcccggccggagcggccggaccttgttttcgaggaagag gacctcccctacgaggaggaaatcatgcggaaccagttctccgtcaaatgctggctccgc tacattgagttcaagcagggtgccccgaagccgaggctcaatcagctgtacgagcgggcc ctgaagctgctgccctgcagctacaaactctggtaccgatacctgaaggcgcgccgggca caggtgaagcatcgctgcgtgaccgacccggcctacgaagatgtcaacaactgccacgag agggcctttgtgttcatgcacaagatgccacggctgtggctggactattgccagttcctg atggaccagggccgaatcacacacacccgccgcactttcgaccgtgctctccgggcactg cccatcacgcagcactctcgcatctggcccctgtacctgcgcttcctgcgctcacaccca ctacctgagacggccgtgcggggctaccggcgcttcctcaagctgagccccgagagtgcg gaggagtacatcgagtacctcaagtccagtgaccggctggatgaagccgcgcagcgcctg gccaccgtggtgaacgacgagcgctttgtgtccaaggctggcaagtccaactaccagctg tggcacgagctctgtgacctcatctcccagaacccagacaaggtgcagtcactcaatgtg gacgccatcatccgcgggggcctcacccgcttcaccgaccagctgggcaagctctggtgc tcgctggctgactactacatccgcagcggccacttcgagaaggctcgagacgtgtacgag gaggccatccggactgtgatgaccgtgcgcgacttcacccaggtgtttgacagctacgcg cagtttgaggagagcatgatcgcagccaagatggagacggcctcagaactggggcgggag gaggaagatgacgtggacctggagctgcgcctggcccgcttcgagcagctcattggccgg cggcccctgctcctcaacagcgtcttgctgcgccagaacccacaccacgtgcacgagtgg cacaagcgcgtggccctgcaccagggccgcccccgggagatcatcaacacgtacacggag gccgtgcagacggtggaccctttcaaggctacaggcaagccccacacactgtgggtcgcg tttgccaagttttacgaggacaatgggcagctggacgatgcccgcatcatcctggagaag gccaccaaggtgagcttcaagcaggtggacgacctggccagcgtgtggtgtgagtgtggc gagttggagctccggcacgagaactacgaccaggctttgcggctgctgcggaaggccacc gcgctgcctgcccgccgagccgagtacttcgacggctcggagcccgtgcagaaccgcgtg tacaagtccctgaaggtgtggtcgatgctcgccgacctggaggagagcctgggcaccttc cagtccaccaaggccgtctacgaccgcatcttggatctgcgtattgccacgccccagatt gtcatcaactacgccatgttcttggaggagcacaagtacttcgaggagagcttcaaggcg tacgagcgtggcatctcgctgttcaagtggcccaacgtgtctgacatctggagcacctac ctgaccaaattcattgcccgctacgggggccgcaagctggagcgggcgcgggacctcttc gaacaggcgctggacggctgccctcccaaatacgcgaagacgctgtacctgctgtacgcc cagctggaggaagagtggggcctggcccggcacgccatggcagtgtacgagcgcgccacc cgggccgtggagcccgcccagcagtacgacatgttcaacatctacatcaagcgtgcggcc gagatctacggggtcacccatacccgcggcatctaccagaaggccatcgaggtgctgtcg gacgaacacgcccgggagatgtgcctgcggttcgcggacatggagtgcaagctcggcgag atcgaccgggcgcgggccatctacagcttctgctcccagatctgtgacccccggaccacc ggggctttctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc cgggagatgctgcggatccgccgcagcgtgcaggccacgtacaacacgcaggtcaacttc atggcctcgcagatgctcaaggtgtcgggcagcgccacgggcaccgtgtccgacctcgcc cccgggcagagcggcatggacgacatgaagctgctggagcagcgggcagagcagctggcg gccgaggccgagcgggaccagcccccgcgggcccagagcaagatcctgtttgtgaggagc gacgcatcccgggaggagctggccgagctggcccagcaagccaaccccgaggagattgag ctagggggggacgaggacgaggacgagatggatctggaacccaacgaggtgcggttggag cagcagagtgtgccggctgccgtgttcgggagcctgaaggaggactga

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