Lynx rufus (bobcat): 124524385
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Entry
124524385 CDS
T08475
Name
(RefSeq) polycystic kidney disease protein 1-like 1
KO
K04987
polycystin 1L1
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lruf03037
]
124524385
04040 Ion channels [BR:
lruf04040
]
124524385
Cilium and associated proteins [BR:
lruf03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
124524385
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124524385
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
REJ
PKD
Polycystin_dom
PLAT
PKD_4
T6SS-SciN
Motif
Other DBs
NCBI-GeneID:
124524385
NCBI-ProteinID:
XP_046952582
LinkDB
All DBs
Position
Unknown
AA seq
2775 aa
AA seq
DB search
MASSEYSVPAGYLSASSAARQGAQEEAGRLAAVAGAMTRGHREGPGSRGPRRSLKAFLMT
QREVRANPAPFMNTNESSRPLGARTQVEGDPGLEKPPSLVSLVSWDKNILETTGEAPLSV
VSGRTGAASDPGDSANRNNREPSVTISSSSSSRGLRPCRQQMCVAGKVSSAFCGLPQCTR
PVVGSCSVMVGTPSCTMGRQRSAEDMAPDLLPGTDVTSAAVTMGAPVGARASAQTSAPIS
HSPTLPRSSLGHDGSVFWPRPKQLCPLAQCLPGAISVQGPADAVDPAVRCFPEADTWAPP
SLGFRVQVASDASLCLLLDFGDGCGVQVRIRDVSEGTAVTTFHQFGKEGVYMLKAVIHSE
FRGTEKELGPYYVDIGPATVSVSMNSSSIHKDGLLVLTDSRTDQKGTVVTHRFPTGPSWN
VSFTSRTRAGGGQAWKPVTVRFQMQPVSVYTNGTVFATNTDITFLAVTKETVPLEFLWYF
GEGPPVRTTSRSVRKRLRIPQWYSVTVQASSRLGRVASEPHRIRAQRRIVANRLASPSSA
LLNTSVTFECRLNFGSDVAFLWDFGDGAVGPGGSSASHSYSRHSGDPHTARPAWEGVRAH
RKPRSREGEFTVQVLAFNDVSTASLRKQLFVVREPCQPPPVKNMGPGKVQVWRSQSVNLG
VTFESAILCDISQGLSYTWTFWNSEGARVPLPPAVSTHGQTLTIPGYFLQPGNYTALAKV
QVEGSVVHSSYRVGVEVRARAPVSVISEGTHLFISRAPSFIIVLRGSQSYDPDSPGAVLR
YHWKCTAASAPGHPCFSTSSPRSLDAGAPTLSFPADSLNDNYDQFLVTLMVSSGGRNSSE
AQVFLSPRPNSALRFVHISWVNFRDVFVNWNEELCLQAECEVCGQVSGLSYSWDLFLVNA
TEGTSVEVPFCRTVGLLGSAGLGAVSRPPESSPPSTEPSWPECHTTGAPFSQEPPQTRGQ
PGLSAAGKPSSGPTVSRHWVPATGDTAAPGVTPQDQGSPGPSSPGGSSPSQGLSPSPSDF
EAYYGNIQEAELSRGRQPADWPNPSLPGSDPSSSADRGRGDGDNLLGPLPPTAAAGPPLM
VDWPKSPVGRTLFHGYTASGITGQTVTIKPFALSPGKTYVLQASVASKHGFLGRAQLYVT
LRPAPWAVTCQVQPHRGLEAHTVFSIFCMSGRPDFHYKFSYRIGNGSRHTLYRGTDTQYY
FALPAGEPLDDYKVMLSTEITDGSGSRVQPCAVAVTVLPRLHGGLCLDEDIYNSSLKHLS
TLQLMGSYAEIRNYITMIARILSRWAAEDRSPPCGQWSRIQDALISSACRLPSADQEEML
DSVLLFRDLLRFPHKVSFTSAALVLKSTQALLAQSLLSGRPAVAEGTMLELILLVSAIWE
VSDQETPRNMGFLQEEGIKVISALLLDGLSAAKKHQLCVSAGQMEFCTLLHHDCQGAVQS
LGPVRVHLPGSLARQRPAAAGMQSPCYISQLMLFKKNPYPGRRAPGQIGPLVALSLFTCS
GRRPISRQRLREPVVVEFGEEDGLDERRNRTTFALLRETVNFHRFTGRSESPQESLQIRI
EFSRPISRAFPVMVLVRFSEKPTPSDFLMKKVYVWDEPMVHMYVPAASLRDTSLGYLSLL
DADYDRSPQNKYFAKAVNYTVRFQWLRCVFWETREWRSANSSPQPGASPGKVSCSYDRLA
PVSVARRNLSAGFSVEGVSKLQRHPGNLLPSILIAVSVVLYALLVTKTRRVDRHEREKAG
YIFLQEDTPADHQLYAVVVDTGFRAPAHCSAKVYIVLCGENGVSEPRELYCPEKPLFERN
SRHTFVLSTPALLGPLRRIRLWHDSRGPCPAWYVSHLMVQELGTGPARHWLFPAECWLAA
GRGDGHVQRELGCLRRRPGFWKLLYSKFTEYLEDFHVWTSVYSRPSPSGFLRTPRLTVAF
TLLCAYACLAALVTASRQEQLLWALGAPDTATGSFQTGLLCTLLASPAAQLLSLLLRLGQ
EPSGPRRVKPRLPLRRAPMGAAQGPNSHGRTPEARKIHKRNTLPGCAGARRRAAGGGDAG
GPTPELEACGADPHQRTEGEEGAQVPTSGSGRLAVLQWPRAPPPWSGFAAWATCWMVSVA
CGLGTAFLGYRFNPTQCAQWLHLLTLSVLCCVFVTQPLLVGLVALGFAWRKRDDPHFFTE
SLREATKDLGSELEGRVRSPMAHRASQMEEMVAARQRARRLRWARPPSAAQLSVTRERMR
RETRTRVALRDVCMYTLMLLLHWFVLCGKVSQDEYSLNQAIRNEFTRNARSSSGGLTSVG
AWWDWSLTTLLDGLHGQGAHTAGVPRAQPGALGGKCYLMGALVIKQLRASSDSECELPSP
PSVLTEDSPPTHSPQVGATDTSSVTDPAIQGVAASGPGDYGAREHWVLSLGSTRAAAHAA
LSGLRASRWIDCSTRAVSVHFTLYNPPTRFLSSVSLHTELLPAGGLALSPLVESVAIFHS
DSSRWYRLTLPELVFLALNLIGLCLHLSGMAETGVRSYWHSPGRWLELTVVGAGLAYHAA
SSHLVTLTGEVADHFQKGLFHEFLDLSLVTSWNQRVSWLQGTLSFVLTLKCICLVGVQTP
VASCSFLTRRSFAGVFAAGLAGVLMLAVHSHLRAAPPGTFTDVSRGLPFRFPGRRQRDTF
PGLSKSDPWAPAWCCGAFFIVTSTVWLGTLRGSLMTLVRKRKSFQSKSLVSLEDVTACVW
GQCLALLGLERPQREEAETVESQHYYLDEVSDLLEELLLKINGLCDSLRLPLPEQQSCDE
TEARAEGGPLGSISA
NT seq
8328 nt
NT seq
+upstream
nt +downstream
nt
atggcctcttctgagtactctgtgccagctgggtatttgagtgcctcttccgctgctcgt
cagggggctcaggaggaagctggccggttggctgctgtggccggggccatgacccgggga
caccgggaaggacctgggtcccgagggcccaggaggtctctaaaggcgtttctgatgact
cagagagaggtccgcgctaatcctgcgccttttatgaacaccaacgagtccagccgtcct
ctgggtgcgcggacacaggtggaaggagacccaggactggagaaaccaccctcgctggtg
tcgctggtgtcgtgggacaagaacattctggaaacaactggtgaagcgccattaagtgtg
gtcagcgggagaacaggggctgcttcagatccaggcgacagtgccaacagaaacaaccgg
gaaccttccgttacaatctccagctcctcgagcagccgtggcctgcgcccctgtcgccaa
cagatgtgtgtggctgggaaagtgagcagtgccttctgtggtcttccccagtgcacccgc
cccgtggtgggctcctgcagcgtgatggtggggaccccctcctgcaccatgggacggcag
cgctctgcagaggacatggccccggacctgcttccagggactgacgtcacgtcggccgct
gtcacgatgggggccccggtcggggcgcgtgcatccgctcaaaccagcgccccgatttca
cattctcccaccttgcccagaagctcccttggccacgatggctcggtgttctggcctcgt
cccaagcagctctgtcccctcgctcagtgtctccctggggccatctccgtgcaaggtcct
gccgacgcagtcgatcccgccgttcgttgcttcccagaagctgacacttgggcccctccg
agtctggggtttcgggtccaggtggcttccgatgcgagtctgtgtctgctcctggatttc
ggggacggctgtggggttcaagtgaggatccgcgacgtgtccgagggaacggcggtcacc
accttccaccagtttgggaaagaaggagtctatatgctcaaggcagttattcacagtgag
ttccgtggaactgaaaaggagctcggcccctattatgtggacatcggccctgcgaccgtg
tccgtgtccatgaactccagcagcatccacaaggacgggcttcttgtcctcacggactcc
cgcacggatcagaaaggcactgtcgtcacacatcgttttccaactgggccctcgtggaac
gtgtccttcacttctcggacacgagcgggcggcggccaggcgtggaaacccgtgactgtt
cggttccagatgcagcccgtctctgtctacactaacggaaccgtgtttgccaccaacacc
gacatcacctttctggctgtgaccaaggagacggtccccctggagttcctgtggtatttc
ggagaaggcccacccgtgaggacaacttccaggagcgttaggaaaagactccgcatcccc
cagtggtatagcgtgacggtgcaggcttccagcaggctgggcagggtggcttcggagccc
caccgcatcagggcgcagaggagaatcgtcgccaatcggctcgcgtccccgtcctcggct
ctgctcaacaccagcgtgacctttgagtgcagactcaacttcggcagcgacgtcgctttc
ctgtgggacttcggggacggcgccgtgggcccagggggcagctctgccagccacagctac
agcaggcattctggagatccacacacagctaggcctgcctgggaaggtgtacgtgcccac
aggaagcctcgttcaagggaaggagagtttaccgtccaggtcctcgccttcaacgatgtc
agcaccgcctccctgagaaagcaacttttcgtcgtgcgtgagccctgccagccgcctccg
gtgaagaacatggggccagggaaggtgcaggtatggagatctcagtctgtgaacctgggt
gtgacgttcgagtctgcgatcctctgtgacatctcccaaggcctctcctacacctggacc
ttctggaactccgagggggcacgggtgcccctgccccctgctgtcagcactcacgggcag
accctcaccatccccggctacttcctgcagcccggaaactacaccgcgcttgccaaggtt
caggtggaaggcagcgtcgtgcacagcagctaccgtgtgggggtggaggtgcgagcccgg
gcccccgtgagcgtcatctccgagggcacgcacctgttcatctccagagccccctcgttc
atcatcgtcctcaggggatcccagtcttatgacccagacagtcctggggccgttctcagg
tatcactggaagtgcaccgcggccagcgcccctgggcacccctgcttctccacctcctct
ccacgcagcctggatgccggggctcccaccctttcctttcctgcggactctctgaacgac
aactatgaccagtttctcgtgacactgatggtgtccagcggcggccggaactcttcagag
gcacaggtgttcctgtcccctcgccccaactcggcactcagattcgtccacatctcctgg
gtcaactttagagacgtctttgttaactggaacgaggaactttgtcttcaggctgagtgc
gaagtctgtggccaagtgtccgggctgtcctactcctgggacctctttctggtcaacgca
acagaagggactagtgtggaagttcccttttgtaggacggtgggactgctgggctctgcc
gggctgggggccgtttccaggccaccagagtccagtccaccgtccacggagccgagctgg
ccggagtgccacacaacgggagcgccgttctcacaggagccgccacagacccggggccag
cccggcctttcagccgcggggaaaccctcctcagggcccacggtcagccgacactgggtt
cccgccacgggtgacactgcggccccgggagtgactccccaggaccagggctctccagga
cccagctcccctggaggaagttcgccctcccagggactgtccccttccccctctgatttt
gaagcctattacggcaatatccaagaagcagagctgtccagagggagacagcccgctgac
tggcccaaccccagcctcccaggatcagatccgagttccagtgccgacaggggccgtggt
gatggggacaacctgctgggccccttgccccccacagctgctgctgggccccctctcatg
gttgactggcccaagtccccggtgggccgcacactcttccacggctacactgcctccggt
atcacgggacagactgtgacaatcaagccattcgcactgagccctgggaagacctatgtc
ctgcaagcctctgtggcctccaagcacggcttcctggggcgagctcagctttacgtgacg
ctcaggccagctccgtgggccgtgacctgtcaagtgcagccacatcgtggcctcgaggca
cacaccgtcttcagcatcttctgcatgtcagggagaccggacttccattacaaattcagt
taccggataggaaacgggtccagacacactttgtaccgcgggacagacacccagtactac
tttgcactgcccgcgggcgagcccttggatgactataaagtcatgctgtccaccgagatc
acagatggctcgggctcccgggtacagccgtgtgccgtggcggtgactgtgctgccccgt
ctccacgggggtctctgcctggacgaggacatatataattccagcctgaagcacctgtcc
accctccagctgatgggcagttacgcagaaatcaggaactacatcaccatgatcgccagg
atcctgagtcgctgggctgcggaggacagaagtcccccgtgcggccagtggtcacgaata
caggatgcgctgatttcttccgcatgcagactgccttccgcagatcaggaggaaatgctt
gattctgttctcctgttcagggacctcctgcgcttccctcacaaggtaagctttacgagt
gcagctctcgtcctgaagtccacccaggcgctcctggctcagagcctgctctcggggagg
cccgcggtggccgagggcacgatgctggagctcatactgctggtgtctgccatctgggaa
gtgtccgaccaggagaccccgaggaacatgggcttcctgcaagaagagggcattaaggtc
atctcggccctcttgttggacggtctctctgcagccaagaagcatcagctctgcgtcagc
gctgggcagatggagttctgcacgcttcttcatcacgactgtcagggcgccgtgcagagc
ctgggccccgtgcgcgtgcatttacccggcagcctggccagacagaggcctgcggcagcg
gggatgcaaagcccgtgttacattagccagctcatgctcttcaagaagaacccatatccg
gggcgacgagctcccggccagattggcccacttgtcgccctgtccctgttcacctgctcc
ggcagaaggcccatcagcaggcagcggctgagggagcctgtggtcgtggagttcggggag
gaagacggcctggatgagaggagaaacaggacgacctttgcgttgcttcgggagacagtg
aattttcatcggttcaccgggcgttccgaaagcccccaggagtctctgcagataaggata
gaattctctaggcccatttcaagagcgttcccggtcatggtgctggtaaggttctctgag
aaacctactccttccgattttctcatgaaaaaggtctacgtctgggatgagccgatggta
cacatgtatgtccctgccgcttctctgagagacacaagcttgggatacttatccttactg
gatgctgactatgacagaagccctcagaacaagtatttcgccaaggccgtcaactacact
gtgcgtttccagtggctccgatgcgtcttctgggaaacgagggaatggaggtctgcaaac
tcctctccgcagccaggagcttctccagggaaagtgagctgcagctacgatcgcctcgca
ccggtctctgtcgcaagaagaaacctgagcgctggcttttcagtggagggcgtttccaag
ctgcagagacacccgggaaacctgcttcccagtattttgattgcggtttctgtggttctc
tatgcacttttggttaccaaaaccaggcgtgtggatcgtcacgagagagagaaggcgggg
tacattttcctgcaagaagacactccagccgaccaccagctgtacgcagttgttgtagac
acaggcttccgggctccagcccactgtagcgccaaggtttacattgttttgtgtggagaa
aatggagtttcagaacccagagaactctactgtccagagaagcccctgtttgaaaggaac
tccagacacacctttgtcctgagcaccccggctctgctgggcccgctccgcaggatccgc
ctctggcacgacagccgcgggccctgccccgcctggtacgtgagccacctcatggtgcag
gagctgggcaccgggcccgcgcggcactggctcttccccgccgagtgctggctggcggcg
ggccggggggacggccacgtgcagcgggagctgggctgccttcgccggagacccggcttc
tggaagctcttgtattcgaagttcacggagtatctggaagacttccacgtctggacctcc
gtgtacagccggccctcgcccagcggcttcctgcgcaccccgcgcctcaccgtcgccttc
accttgctgtgcgcgtacgcgtgtctcgctgccctggtcaccgcctcgaggcaagagcag
ctcctgtgggctctgggcgcccccgacacggccactgggtccttccagacgggtctcctg
tgcaccctgctggcgtctcccgcggctcagctcttgtcgctgctcttgaggctcggccag
gagcccagcgggccacgccgagtgaagccccgcctgcccctgaggagggcgcccatgggg
gcagcacagggccctaactcccatggcaggacaccagaggctcggaagatacacaagcgt
aacactctccctgggtgcgccggggcccgcagaagggcggcaggcggtggcgatgcaggc
ggtccgaccccggagctagaggcctgcggagctgacccccaccagcggaccgagggggag
gagggggcacaagtccccaccagtgggtctggacgacttgctgtgctccagtggccgagg
gcaccaccgccttggtcaggcttcgcagcgtgggccacttgctggatggtgtctgtggcc
tgtggcttggggacggcatttctggggtacaggtttaacccgacacaatgcgcacagtgg
ctgcacctgctgaccctgtccgtgctgtgctgtgtttttgtcacccagccacttctggtc
ggcctcgtggccttgggctttgcctggagaaagagagacgacccacatttcttcaccgag
tctctgcgcgaggccaccaaggacctgggctctgagctggaaggacgtgtaaggtccccc
atggcccaccgtgcaagccagatggaggagatggtggctgcccgacagcgagcacgccgc
ctgcgctgggcacgtccaccgtccgcggcccagctcagcgtcaccagggagaggatgagg
agagagacccggacgcgggtggccctgagagacgtttgcatgtacaccctcatgctgctc
ctgcattggtttgtactgtgtgggaaagtctcccaggatgaatattccctcaatcaagct
atccggaatgagtttacaaggaatgccaggagctcctccggcggcctgacaagtgtgggg
gcctggtgggactggagtctgaccacgctgctggatggcctgcatgggcaaggcgcccac
acagccggcgtgccacgtgctcagcccggagcccttggcgggaagtgctacctcatgggc
gctttggtcattaaacagctgagagcttcctctgacagcgagtgcgagcttcccagccca
ccttcagtgcttactgaagactctcctcctacacatagcccccaagtgggagccaccgac
accagctctgtgacagatccggccatccagggagtggctgcaagtggccccggggactac
ggggcgagggagcactgggtgctcagcctgggcagcacaagggcggcggcccacgcggcc
ctgagcggcctcagggccagcaggtggatagactgcagcaccagagccgtgtccgtgcac
ttcactctctataaccctccgactcgattcttgtccagcgtgtccctgcacaccgaactg
ctccctgcagggggcctggccctctccccgctggtggagtcggtggccatcttccacagt
gactcgtcccggtggtaccgcctcacgcttcccgagctggtcttcctggcgctcaacctg
atcggcctgtgtctgcatctctccggcatggctgagacgggcgtccgcagctactggcac
agcccggggcgctggctggagctcaccgtggttggagccggcctcgcctaccacgcagcc
tccagccacctggtcactctcaccggggaggtggccgaccacttccaaaagggacttttc
cacgagtttctagacctcagtcttgtgacttcatggaatcagagggtgtcgtggctgcag
gggaccctgtcattcgtcctgacgctgaagtgcatctgcctcgttggtgtccagacgccg
gtggcgtcctgctccttcctgacacgccgctctttcgctggcgtcttcgcggcagggctg
gcgggcgtcctgatgctagcagtccactcccacctgcgcgcagcaccacctggcaccttc
acggacgtctcccgaggcctgccgttccgttttccaggaagacgccaaagagacacgttc
cccggtctttccaagtctgacccgtgggccccggcttggtgctgcggtgctttctttata
gtaacgagcaccgtgtggttgggaacgctgagaggttccctcatgactcttgttcgaaaa
agaaaatctttccaaagcaaatcccttgtgagtctagaagacgtgactgcgtgcgtgtgg
ggacagtgcctggccttgctgggactggagcggccacagcgggaagaggctgagacggtc
gaaagtcagcattactacctggatgaagtctcagatctgctagaggaacttctgttgaag
attaatggcttgtgtgacagcctgcgacttcctcttccagagcagcaatcctgtgatgag
acagaggccagggcagaaggtggtcccttggggagcatttctgcctaa
DBGET
integrated database retrieval system
