Lynx rufus (bobcat): 124524406
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Entry
124524406 CDS
T08475
Name
(RefSeq) pseudouridylate synthase 7 homolog
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lruf03016
]
124524406
Enzymes [BR:
lruf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
124524406
Transfer RNA biogenesis [BR:
lruf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
124524406
Prokaryotic type
124524406
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
124524406
NCBI-ProteinID:
XP_046952630
LinkDB
All DBs
Position
Unknown
AA seq
715 aa
AA seq
DB search
MPGRPRSWLFRVALVAAALLRPEQRARPLAARPGPRPRSQAPGSLKCFLGALKMEMTEVT
GVSLKRGSVAVEDNDRVAPAEEAKRQKILDHCLTKSQSELEHVSPPSGVNVPEPPEAVSA
REGTKNSDVQLEEEEEEEEDGLSEEGEEEEEAESFADMMKHGLTELDVGITKFVSSHQGF
SGILKERYSDFVVHEIGKDGRISHLDDLSVPVDEEDPTEDVFTVLTAEEKQRLEELQLFK
NKETSVAIEVIEDTKEKRTIIHQAIKSLFPGLETKTEDREGKKYIVAYHAAGKKALANPR
KHSWPKSRGSYCHFVLYKENKDTMDAINVLSKYLRVKPNIFSYMGTKDKRAITVQEIAVL
KITAQRLAHLNKCLMNFKLGNFSYQKNPLKLGELQGNHFTVVLRNITGTDEQVQQAMNSL
KEIGFINYYGMQRFGTTAVPTYQVGRAILQNSWTEVMDLILKPRSGAEKGYLVKCREEWA
KTKDPAAALRKLPVKRCVEGQLLRGLSKYGMKNIVSAFGIIPRNNRLMYIHSYQSYVWNN
MVSKRIEEYGLRPVPGDLVLKGATATYVDEEDVNNYSIHDVVMPLPGFDVIYPKHKISEA
YREMLTADNLDIDNMRHKIRDYSLSGAYRKIIIRPQNVSWEVVAYDDPKIPLFNTDVDNL
EGKPPPVFASEGKYRALKMDFSLPPSTYATMAIREVLKMDTSIKNQTQLNTTWLR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgccggggcgccctcgcagctggcttttccgagtggccctcgtcgccgccgcactcctg
cgcccagagcagcgcgcccgccccctcgccgcccggcccgggccgcgcccgcgctcccag
gccccgggttctcttaaatgttttcttggagccttaaaaatggagatgacagaagtgact
ggtgtgtcgctgaaacgtgggtctgttgctgttgaagacaatgacagggtggccccagct
gaggaggcaaaaagacagaagatcttggaccattgtctgaccaaaagtcagagcgagctg
gagcatgtctctccacccagtggagtcaacgtgcctgagccacctgaggctgtgagtgcc
agagagggtacaaagaattctgatgtgcagttggaagaagaggaagaggaggaggaagat
ggcctctctgaggagggtgaggaggaggaggaagctgagagttttgcagacatgatgaag
catggcctcactgaacttgacgttggcatcaccaagtttgtaagttctcatcagggattc
tcaggcatcttgaaagaaagatactccgactttgttgttcatgaaataggaaaagacgga
cgcatcagccatttggatgacttgtctgtccccgtggatgaagaggatccaacggaagac
gtatttacagttttgacagctgaagaaaagcagcgtttagaagagctccagctttttaaa
aataaggaaactagtgttgccatcgaggttattgaggacaccaaagagaaaagaaccatc
atccatcaagcgattaaatctctgtttccaggattagagacaaaaacagaggatagagag
gggaagaaatatattgtagcctaccatgcagctggaaaaaaggctctggcaaatccaaga
aaacattcttggccaaaatctaggggaagttactgccactttgtactctacaaggaaaac
aaagacaccatggatgctattaacgtactgtctaaatatttacgagtcaaaccaaacata
ttctcctacatgggaaccaaagataaacgggccataaccgttcaagagattgctgttctc
aaaataactgctcaaagacttgcccacttgaacaagtgcttgatgaactttaagctagga
aatttcagctatcagaaaaaccctctgaaattgggagagcttcaagggaaccacttcact
gttgtcctcagaaatataacaggaacggatgaacaagttcagcaagccatgaactctctc
aaggagattggatttattaactactatggaatgcaaagatttggaactaccgctgtcccc
acatatcaagttggaagagctatattacagaattcctggactgaagtcatggatttaata
ttgaaaccccgttctggagctgaaaagggctacttggttaagtgcagggaagagtgggcg
aagaccaaagacccagctgctgccctcagaaaactacctgtcaaaaggtgtgtggaaggg
cagctgctgcgaggactttcaaaatatggaatgaagaatatagtctctgcatttggcata
ataccaagaaataatcgcttaatgtatattcatagctaccaaagctatgtgtggaataac
atggtaagcaagaggatagaggagtatggactgagacccgtcccgggggacctcgttctc
aaaggagctacagccacctatgttgatgaagaagatgttaataattactccatccatgat
gtggtaatgcctttgcctggtttcgatgttatctacccaaagcataaaattagcgaagcc
tacagggaaatgctcacagcagacaatctggatattgacaacatgagacacaaaattcga
gattactccttatcaggagcctaccgaaagatcattattcgtcctcagaatgtcagttgg
gaagtcgttgcatatgatgatcccaaaattccactcttcaacacagatgtggacaaccta
gaagggaaaccaccaccggtgtttgcttctgaaggcaaatacagagctctgaagatggat
ttttctcttcctccttctacctacgctaccatggccattcgcgaagtgctaaaaatggat
accagcatcaagaaccagacccagctgaacaccacctggctccgctga
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