Lynx rufus (bobcat): 124524431 Help Entry 124524431         CDS       T08475                                  Name (RefSeq) collagen alpha-1(VII) chain   KO K16628   collagen type VII alpha Organism lruf  Lynx rufus (bobcat) Pathway lruf04382   Cornified envelope formation lruf04974   Protein digestion and absorption Brite KEGG Orthology (KO) [BR:lruf00001]  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     124524431   09158 Development and regeneration    04382 Cornified envelope formation     124524431 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Collagen fn3 VWA VWA_2 Pur_ac_phosph_N Kunitz_BPTI DUF4992 Motif Other DBs NCBI-GeneID:  124524431 NCBI-ProteinID:  XP_046952661 LinkDB All DBs Position Unknown AA seq 2938 aa AA seqDB search MRLPLLVAALCAGILAGALRVRAQQRERVTCTRLYAADIVFLLDGSSSIGRGNFREVRGF LEGLVLPFSGAASAQGVRFAAVQYSDDPRTEFGLDALGSGSGGEVIRAIRELSYKGGNTR TGAAILHVADHIFLPQLARPGVPKVCILITDGKSQDLVDTAAQRLKGQGVKLFAVGIKNA DPEELKRVASQPTSDFFFFVNDFSILRTLLPLVSRRVCTTAGGVPVTLPTDDLTSGPRDL VLSEAGSQSLRVRWTAASGPVTGYKVQYAPLTGLGQPLPGERREVSIPAGETSTQLQGLR PLTEYQVTVVALYANSIGEAVSGTARTTALEGPELTIQNTTAHSLLVAWRSVPGATGYRV TWRVLSGGVTQQQELGPGQGSVLLRDLEPGTDYEVTVSTLLGRSIGSAASLTARTDASVE QTLRPVILGPTSILLSWNLVPEARGYRLEWRRESGLGVPQKVVLPSDVTRYQLDGLQPGT EYRLTLYTLLEGREVATPATVVPTGPELPVGPVTDLKATELPGQRVRVSWSPVPGATEYR ITVRSTQGVERTLVLPGSQTAFDLDDVRAGLSYTVRVSARVGSREGGASTLTVRREPETP LAIPGLRVVASDATRVRVAWGPVPGASGFRISWRTDSGPESSQTLPPESTATDIMGLRPG TSYQVAVSALRGREEGPPVVIVARTDPLGPVRTVHVTQTSSSSVTISWNRVPGATGYRVS WHSGHGPEKSQLVSGEATVAELDGLEPDTEYTVHVWPHVAGVDGTPASVVVRTDPAPVGS VSKLQILNASSDVLRVTWVGVTGATAYRLAWGRSEGGPTRQQMLPGNTDSAVIRGLEGGV SYSVRVTALVGDREGAPVSIVVTTPPEAPPALETLRVVQRGEHSLSLRWQPVPGAHGFRL RWRPEGGQEQSRVLGPGISSYELDGLESATPYRVWLSVLGSAGEGPPTEVIARTESPRVP STELRVVDTSIDSVTLAWTPVSGVSSYILSWQPLRRPGQDIPGASQTLPGISNSQQVTGL EPGISYTFSLTPIREGIRGSEASVTQNPVCPHGQMDVVFLLHTTQDNAHRAEAVKRALER LVSALGPLGPQAIQVGLLSYSHRPSPLFPLNSSYDPNIILQKIRSIPYMDPSGNNLGTAV VTAHRHLLAPDAPGRRQHVPGVMVLLVDEPLRGDIFNPIREAQAAGLRVMILGQAGADPE QLRRLVPGMDPVQTFFAVDDGPSLDRAVSGLATSLCQTALATQPQPEPCTLHCPKGQKGE RGEMGLKGQAGPPGPPGLPGRAGAPGPPGPPGSTVAKGERGFPGADGPPGSPGRPGTPGT PGSKGSPGWPGPRGDPGERGPRGPKGEPGDPGRVIGGEGPGLPGQKGDPGPPGLPGSRGP LGDPGPRGPPGLPGTTVKGDKGDRGERGPPGPGDGGTVPGEPGLPGLPGGPGPQGPVGPS GEKGEKGDCEDGAPGLPGQPGSPGERGPRGPPGDIGPKGDRGLKGAVGEIGEKGERGPPG PVGPQGLPGVAGRPGAEGPEGPPGPTGRRGEKGEPGRPGDPAVGPDGAGAKGEKGDVGPT GPRGATGVKGERGPPGLVLQGDPGPKGDPGDRGPIGLTGRAGPPGDSGPPGEKGDPGRPG PPGLVGPRGRDGEVGEKGDEGPPGDPGLPGKAGERGLRGAPGARGPVGEKGDQGDPGEDG RNGSPGPSGPKGDRGEPGLPGPPARLVDMGVGAGEKGEPGDRGQEGPRGPKGDPGPPGAA GERGISGLRGPPGPQGDPGVRGPTGEKGDRGSPGLDGRSGLDGKPGAPGPPGLHGAAGKA GDPGRDGLPGLRGEHGPPGPSGPPGAQGKPGEDGKPGLNGKNGEPGDPGEDGRKGEKGDS GTPGREGHEGPKGERGAPGSPGLQGPPGLPGQVGPSGQGFPGVPGNTGPKGDRGESGPKG EQGLPGERGLRGEPGSVGNVERLLETIGIKTSALREIVETWDESSGSFLPLPDRRRGPKG DPGERGPPGKEGPIGFSGERGLKGDRGDPGPQGPPGLALGERGPPGPPGLAGEPGKPGIP GLPGRAGDAGEAGRPGERGERGEKGERGEQGRDGPPGLPGPPGPPGPKVAVDELGPGLSG VQGPPGLKGTKGDPGSDGDRGPKGDRGVPGIKGDRGEPGQRGLDGSPGLPGERGVAGPEG KPGLQGPRGTPGPVGGHGDPGPPGAPGLAGSTGPQGPSGLKGEPGETGPPGRGLPGPTGA VGLPGPPGPSGLVGPQGAPGLPGQVGETGKPGAPGRDGASGKDGDRGAPGVPGSPGLPGP VGPKGEPGPMGAPGQAVVGPPGAKGEKGAPGGLAGDLVGEPGAKGDRGLPGPRGEKGEAG RAGEPGDPGEDGQKGAPGLKGNKGDPGIGVQGPLGPAGPPGLKGDAGPPGPPGAPGVVGF PGQTGLRGEMGQPGPSGERGLAGLPGREGAPGPLGPPGPPGSAGVPGPSGLKGDKGDPGA GLPGARGERGEPGVRGEDGRPGQEGPRGLTGPPGSRGERGEKGDTGTTGLKGDKGDAAMA VGPPGPRGAKGDMGERGPRGIDGDKGPRGDTGNPGEKGTKGEPGDKGSTGLLGARGLTGP KGEPGAAGIPGDPGSPGKDGTPGIRGDKGDIGFMGPRGLKGERGIKGACGLDGEKGDKGE AGPPGRPGLAGRKGDVGEPGMPGQSGTPGKEGLIGPKGDRGFDGQPGSKGDQGEKGERGP PGIGGFPGPRGNDGSSGPPGPPGSVGPKGPEGLQGQKGERGPPGERVVGAPGAPGAPGER GEQGRPGPAGPRGEKGEAALTEDDIRGFVRQEMSQHCACQGQFIASGSRPLPSYAADTAS PQLHPVPVLRVSHAEEEGEVPPEDDEYEYSEYSVEEYQDPEVLQDGDDPCLLPLDEGSCT AYTLRWYHRAVAGGTDACHPFVYGGCGGNANRFGTREACERRCMPRMVQSQGTGAARS NT seq 8817 nt NT seq  +upstreamnt  +downstreamnt atgaggctgccgctcctggtggccgcgctctgcgccgggatcctggcaggggcgctccga gtgcgggcccagcagagggagagagtgacctgcactcgcctttatgctgctgacatcgtg ttcctacttgatggctcttcgtctatcggccgtggcaacttccgtgaagtgcgtggtttc ctggagggactggtgcttccattctctggggcagccagtgcacaaggtgtgcgctttgct gctgtgcagtatagcgacgatccacggacggagtttggcctcgatgcacttggctcaggc tcagggggcgaggtgatccgagccatccgtgagctcagctacaaggggggcaacacgcgc acgggggctgcaattctccacgtggctgaccacattttcctgccccagctggcccgacct ggtgtccccaaggtctgcatcctcatcacagatgggaagtcgcaggacctggtggatacg gctgcccagcggctgaaggggcagggggtcaagctgtttgctgtgggcatcaagaatgcc gaccccgaggagctgaagcgagttgcctcacagccgaccagtgatttcttcttcttcgtc aacgacttcagtatcttgaggacactgctgccccttgtttcccggagagtgtgcacaact gctggtggtgtacctgtgaccttgcccactgatgacttgacatcggggccacgagacctg gtgctgtccgaagcaggcagtcaatccttgagagtacggtggacggcggccagtggccct gtgactggctacaaggtccagtacgctcctctgacagggctgggacagccactgccaggc gagcggcgggaggtgagcatcccagctggtgagaccagcacacagctgcagggtctccgg ccactgactgagtaccaagtgaccgtggtagccctctacgccaacagcatcggggaggct gtgagcgggacagctcggaccactgccctggaggggccagagctgaccatccagaatacc actgcccacagcctcctggtggcctggcggagtgtgccaggtgccactggctaccgtgtg acatggcgggtcctcagtggtggtgtcacacagcagcaggagctgggccctgggcagggg tcagtgttgctgcgtgacctggagcctggcacggactacgaggtgactgtgagcaccctg cttggccgtagcataggatctgccgcctccctgactgcccgtactgacgcttccgttgaa cagaccctgcgcccagtcatcctggggcccacatccattctcctttcctggaacttggtg cctgaggcccgcggctaccggctagaatggcggcgtgagagtggcttgggggtgccacag aaggtggtactgccctctgatgtgacccgctaccagctggatgggctgcaaccaggcact gagtatcgcctcacgctctatactctgctggagggccgcgaggtagccacgcctgcaact gtggtccccaccgggccagagctgcccgtgggccctgtgacggacttgaaggcaaccgag cttcctgggcagcgggtgcgagtatcctggagcccagtccccggtgccaccgagtaccgc atcactgtgcgcagcacacagggggttgagcggaccctcgtgcttcctgggagtcaaaca gcctttgacttggatgatgtccgggctggcctaagctacactgtgcgggtgtctgcccga gtgggcagccgtgagggcggtgccagcactctcactgtccgccgggaaccggaaacccca cttgccatcccagggctacgagttgtggcatcagatgcaacacgggtgagggtggcctgg ggacctgttcctggagccagtggatttcggattagctggaggacagacagtggtccggaa tccagccagacattgcccccagaatccactgccacagatatcatggggctacggcctgga acctcctaccaggtggctgtgtcagcactgcgagggagagaggagggtccccctgtggtc atcgtggctcgcactgacccactaggcccagtgaggactgttcatgtgacgcagaccagc agctcatctgtcaccatctcctggaacagggttcctggtgccacgggatacagggtctcc tggcactcaggccatggcccagagaaatcccagttggtttctggagaggccacagtggct gagctggatgggctggagccagatacggagtacacggtgcatgtgtggcctcatgtggcc ggtgtggatgggacacccgcctctgtggttgtgaggacagaccctgcgcccgtgggcagt gtgtcgaagctgcagatcctcaatgcctccagtgatgttctgcgggtcacctgggtcggg gtcactggagccacagcctacagactggcctggggccggagcgagggtggccccacaaga cagcagatgctcccaggaaacacggactccgccgtaatacggggcctcgaaggcggagtc agctactcggtgcgagtgactgctcttgtgggggaccgtgagggagcaccggtctccatt gtcgtcaccacgccgcctgaggctccgccagccctggagacccttcgcgtagtgcagcga ggcgagcactcgctgagtctgcgctggcagccggtgccgggggcacacggcttccgtctg cgttggcgacccgagggtggccaggaacagtcccgggtcttggggcccggtatcagcagc tatgaactggatgggctggaatcagcaaccccataccgagtgtggctgagcgttttgggg tcagctggagaagggccccccacagaagtgattgcacgcactgagtcaccccgggtgcca agcactgaactgcgtgtggtggacacttcaattgactcagtgactctggcctggacccca gtgtctggagtatccagctatattctgtcctggcagccgctcagacgccctggccaagac atccctggggcctcacagacacttccagggatctcgaactcccagcaggtgacagggcta gaacctggcatctcctataccttctcgttgacaccgatccgggagggtatacggggttct gaggcctctgtcacacagaacccagtgtgtccccatggccagatggatgtggtgttcctg ctgcacaccactcaggacaatgctcatcgtgcagaggccgtaaagcgagccctggagcgt ctggtgtctgcgcttgggcctcttgggccacaggcaatccaggttggcctcctgtcctac agtcatcggccctccccactgttcccactgaatagctcctatgatcctaacatcatcctg cagaagatccgcagcatcccttacatggacccaagtgggaacaacctgggcacagctgtg gttactgctcacagacacctattagcaccagatgctcctgggcgccgccagcatgtacca ggggtaatggttttgctagtagatgagcccttgagaggtgacatcttcaaccctatccgt gaggcccaggctgctgggctcagagtgatgatactgggccaggctggagctgacccggaa cagttgcgtcgcttggtgccaggcatggaccctgtccagactttctttgctgtggatgac ggtccaagcttggaccgggcagtcagtggtttggcaacatccctgtgtcagacagccttg gccactcagccacagccagagccttgcacattgcattgtccaaagggtcagaaaggggaa cgtggagagatgggcctgaaaggacaagccgggcctcctggcccccccggcctcccgggc agggctggtgctcctggacccccagggcctcctggaagtaccgttgcaaagggtgagagg ggctttcctggggcagatgggcctccaggcagccctggccgccctgggactcctggaacc cctggctccaagggctccccagggtggcctggccctcgtggagatccaggagagcgagga cctcgaggcccaaagggggagccgggagatcctgggcgagtcattggaggcgaaggccca gggcttcctgggcagaaaggggaccctggacctccaggcctccctggatcccgtggccca ctgggggacccaggaccccgtggtcccccaggacttcctggaacgactgtgaagggtgac aaaggcgatcgtggggagcggggccccccgggaccaggtgatggtggcactgttccaggg gagcctgggctgccgggtcttcctggaggccctggaccccaaggcccggttggcccctct ggagagaaaggagaaaagggtgactgtgaggatggagccccaggcctcccaggacaacct gggagcccgggtgagcggggcccacgaggacctcctggggacattggccccaaaggtgac cgaggactgaaaggggctgtgggtgagattggcgagaagggtgaacgtggaccccccggc ccagtgggaccgcaggggctgcctggagtggctggacgtccaggagctgaggggcccgaa gggccgccaggacccaccggccgcagaggagagaagggggagcctggtcgccctggggac cctgcagtgggacctgatggtgctggggccaaaggagagaagggagatgtggggcccacg gggcctagaggagctacaggagtcaaaggggagcggggcccgcctggcttggttcttcaa ggagaccctggccccaaaggagaccctggagaccggggtcccattggcctgacaggcaga gcaggacccccaggtgactcaggacctcctggagagaagggagaccctgggcggcctggc cccccaggactcgtcggcccccgaggacgagatggtgaagttggagagaaaggtgacgaa ggtcccccgggtgacccaggtttgcctggaaaagctggcgaacgtggccttcggggggca cctggagctcggggacctgtgggtgagaagggagaccaaggagatcctggagaggatgga cgaaacggcagccctggaccatctggacccaagggtgaccgtggggagccgggtctcccg ggaccccctgcacggctggtagacatgggagttggagctggagagaagggagagccgggg gaccgtggacaggagggtcctcgaggacccaagggtgacccaggcccccctggagctgct ggggagaggggcatcagtggactccgggggcccccaggccctcagggggacccaggtgtc cgaggcccaacaggagagaagggtgaccggggttcacctggcctggatggccgcagtggg ctggatggtaaaccaggagcccctggcccccctgggctgcatggtgctgcaggcaaagct ggagacccagggagagacggccttccaggcctccgaggagaacacggaccccctggcccg tctggcccccctggagcccagggaaagccaggagaggatggcaagcctggcctgaatggg aaaaatggggaacctggggaccctggagaagatggaaggaagggagagaagggagattca ggcacccccgggagagaaggccatgagggtcccaagggtgagcgtggagctcctggtagc cctggactccagggtcccccaggcctccctgggcaggtgggcccttctggccagggtttt cctggggttccaggaaacacaggccccaagggtgaccgtggggagagtggacccaaaggg gaacagggccttccgggagaacgtggcctgagaggagaacctgggagcgtggggaatgtg gagcggttgctggaaacgattggcatcaagacatctgccctgcgagagatcgtggagacc tgggatgagagctccggcagcttcctgcccttgcctgaccggcgccgtggtcctaagggg gacccaggcgagcggggccctccaggcaaggagggacccattggcttttctggagaacgt gggctgaagggagatcgtggagaccctggccctcaggggccaccaggcctggctcttggg gaaaggggcccccctggacctcccggccttgccggggagcctggaaagcctggtattcct gggctcccaggccgggctggggacgcaggggaggcaggaaggccaggagagaggggagaa cgaggagagaaaggagaacgtggggaacagggcagagacggccctcctggcctccctgga cctcctggccctcctggccccaaggtggctgtggatgagctaggtcctggactctctgga gtgcaaggaccccctggactcaaaggcactaagggggatccaggcagtgatggcgaccga ggccccaagggagacaggggtgtgccaggcatcaagggagaccggggagagcctggacag aggggtcttgatggcagcccgggtctaccaggagagcgtggtgtggctgggcctgaaggg aagccgggtttgcaaggtccaagggggacccctggcccagtgggtggccacggagaccct ggacctcctggtgccccgggccttgctggctccacaggaccccagggtccttctggcctg aagggggagcctggagagacaggaccaccaggacggggcctgcccggacccaccggggct gtgggacttcctggccctcctggcccttcaggcctcgtgggtcctcaaggggcaccgggt ctgcctggacaagtgggggagacagggaagccgggagccccaggtcgtgatggtgccagt ggcaaagatggagacagaggagctcctggtgtgccggggtcgccaggtctgcccggccct gttggacctaaaggagagcctggacccatgggggctcctggacaggctgtggtcgggccc cctggagcaaagggagagaagggagcccccggaggccttgctggagacctggtgggagag ccgggagccaaaggtgatcgaggactgccagggcctcggggcgagaagggtgaagctggc cgtgcaggggagcctggagaccctggggaagatggtcaaaaaggggctcctggactcaag ggtaataagggtgacccaggaatcggggtccagggcccccttgggccagctggtcctcca ggtctgaagggagatgcgggcccccctgggccccctggtgctcctggtgttgtcggattc cccggtcagacaggccttcgtggagagatgggtcagccaggccccagtggagagcggggt ctggcaggtctcccggggagagagggagccccaggtcccttggggccacctggaccacca gggtcagcgggagtgcccgggccctctggactcaaaggagacaagggagaccctggagca gggctgcccggggcccgaggcgagcgtggggaacctggtgtccggggtgaagacggccgt cccggccaggagggaccccgaggactcacggggcctccgggcagccggggggaacgtggg gagaagggtgacactggaactacagggctaaagggtgacaagggtgatgcagccatggct gtggggcctccagggccacggggtgccaaaggggacatgggcgaacgagggcctcggggc atagatggtgacaaaggacctcgaggagacactgggaaccctggagagaagggcaccaag ggagagcctggtgacaagggctcaaccgggttgctgggagctcgtggactcacaggaccc aagggtgaacctggtgctgcagggatcccaggtgacccgggatcaccaggaaaggatgga acccctggtatccgaggcgacaaaggagatattggcttcatgggtccccggggcctcaag ggtgaacgagggataaagggggcctgtggccttgatggagagaagggagataagggagaa gctggtccccctggccgccctgggctggcaggacgcaagggagatgtgggggagccgggc atgccgggccagtcggggacccctggaaaggagggcctgattggtcccaagggtgatcga ggctttgatgggcagccaggatccaagggtgaccagggtgagaaaggggagcgggggccc ccaggaattgggggcttcccaggtcccaggggcaatgatggctctagtggcccccctggg ccacctggcagtgttggtcccaaaggccctgaaggacttcagggccagaagggtgagcga ggtccccctggagagagagtggtgggtgcccctggggcccctggggcccctggagagaga ggggagcaggggcggccagggcctgctggcccccgcggggaaaagggagaagctgcgtta acagaggatgacattcggggctttgtgcgtcaggagatgagtcagcattgtgcctgccag ggccagtttattgcatctggatcacgacccctccctagttatgctgcagacactgccagc ccccagctccaccctgtgcctgtgctccgggtctctcatgcagaggaggaaggcgaggtg cccccagaggacgatgaatatgaatattctgagtattctgtggaggaataccaggaccct gaagttcttcaggatggtgatgacccctgcttgcttccactggatgagggctcctgcact gcctacaccctgcgctggtaccatcgagctgtggcgggtggcacagatgcctgtcacccc tttgtctatggcggctgtggagggaatgcgaatcgttttgggacccgtgaggcctgtgag cgccgctgcatgccccgcatggtccagagccagggaacaggtgctgcccgaagctga

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