Lynx rufus (bobcat): 124524744
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Entry
124524744 CDS
T08475
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04151
PI3K-Akt signaling pathway
lruf04510
Focal adhesion
lruf04512
ECM-receptor interaction
lruf05145
Toxoplasmosis
lruf05146
Amoebiasis
lruf05165
Human papillomavirus infection
lruf05200
Pathways in cancer
lruf05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
124524744
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
124524744
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
124524744
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124524744
09162 Cancer: specific types
05222 Small cell lung cancer
124524744
09172 Infectious disease: viral
05165 Human papillomavirus infection
124524744
09174 Infectious disease: parasitic
05146 Amoebiasis
124524744
05145 Toxoplasmosis
124524744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
CorA
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
124524744
NCBI-ProteinID:
XP_046953088
LinkDB
All DBs
Position
Unknown
AA seq
1786 aa
AA seq
DB search
MGLLQVFAFSFLALCGAQVRAQEPEFSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHK
PEPYCIVSHLQEDKKCFICNSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVEN
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCEGSFPGISTG
PMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFRIEDPYSPRIQNLLKITNLRIKFVKL
HTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGINEEVEGMVHGHCMC
RHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSSSCHFDMAVYLATGNVSGG
VCDDCQHNTMGRNCEQCKPFYFQHPERDVRDPHLCERCTCDPAGSQNGGICDSYTDFSAG
LIAGQCRCKLHVEGEHCELCKEGFYGLSAEDPFGCKSCACNPLGTIPGGNPCDSETGYCY
CKRLVTGQHCDQCLPEHWGLSNDLDGCRPCDCDLGGALNNSCSPESGQCACRPHVIGRQC
NEVESGYYFTTLDHYIYEAEEANFGPGVSIVERQYVQDRIPSWTGAGFVRVPEGAYLEFF
IDNIPYSMEYDILIRYEPQLPDRWEKAVIMVQRPGKIPTSSRCGNTIPDDDNQVVSLSPG
SRYVVLPRPVCFEKGVNYTVRLELPQYTSSDSDLESPYTLIDSLVLMPFCKSLDIFTVGG
SGDGLVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLACECDPQGS
LSSVCDPNGGQCQCRPNVVGRTCDRCAPGTFGFGPSGCKPCECHLQGSVNAFCDPITGQC
HCFQGVYARQCDRCLPGYWGFPSCQPCQCNGHADDCDSATGACSGCQDYTTGHNCERCLA
GYYGDPIIGSGDHCRPCPCPDGPDSGRQFANSCYQDPVTLQLACVCNPGYVGSRCDDCAS
GFFGNPSDVGGSCQPCECHGNIDTTDPEACDRETGRCLKCLYHTEGDQCQLCRLGYYGDA
LRQDCRKCVCNYLGTVQDHCNGSDCQCDKTTGQCSCLPNVVGQNCDRCAPNTWQLASGTG
CDPCSCDPAHSFGPSCNEFTGQCQCMPGFGGRTCSECQELFWGDPNVECRACDCDPRGIE
TPQCDQSTGRCVCVEGVEGPRCDKCTRGYSGVFPDCTPCHQCFAVWDVIVAELTNRTQKF
LEKAKALKISGVIGPYRETVDSVEKKVNEIRDILAQSPATEPLKNIGDLFEEAEKLTKDV
TDKMAQVEVKLSDTASQSNSTARELDSLQTEAESLDNTVKELAEQLEFIKNSDIRGALDS
ITKYFQMSLEAEERVNASTTDSNSTVDQSTLTRDRVEELLLERESQFREKQEEQARLLDE
LAGKLQSLDLSAVAEMTCGTPPGASCSETECGGPNCRTDEGEKKCGGPGCGGLVTVAHSA
WQKAMDFDRDVLSALAEVEQLSKMVSEAKLRADEAKQNAQDVLQKTNATKEKVDKSNEDL
RNLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPEQLQNLTEDIRERVESLSQVEVI
LQQSAADIARAEMLLEEAKRASKSATDVKVTADMVKEALEEAEKAQIAAEKAIKQADEDI
QGTQNLLTSIESETAASEENLLNASQRISELERNVEELKRKAAQNSGEAEYIEKVVYTVK
QSADDVKKALDGEVDEKYKKVEKLIAQKTEESADARRKAEMLQNEAKTLLAQANSKLQLL
KDLERKYEDNQKYLEDKAQELVRLEGEVRSLLKDISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atggggctgctccaggtgttcgctttcagtttcttagccctgtgcggagcccaagtgcgc
gctcaagaacccgaattcagctacggctgcgcggagggcagctgctaccccgccactggc
gaccttctcatcggccgagcacaaaagctctcggtgacctcgacgtgcgggctgcacaag
cctgagccctactgtattgtcagccacctccaggaggacaaaaaatgcttcatatgcaat
tcacaagatccttatcatgagaccctcaatcctgacagtcatctcattgaaaatgtggtc
actacatttgctccaaaccgccttaagatttggtggcaatccgaaaatggcgtggaaaac
gtaactatccaactggatctggaagcagaattccattttacgcatctcataatgactttc
aagacattccgtccggccgcgatgctgatagaacgatcgtctgacttcgggaaaacctgg
ggtgtgtacagatactttgcctatgactgtgagggctcatttccaggcatttcaactggc
cccatgaaaaaagtggatgatataatctgtgattcccgctattctgacattgaaccctcg
acggaaggagaggtgatatttcgtgctttagatcccgcgttcagaatagaggatccttat
agtccgaggatacagaatctcttaaaaatcaccaacttgagaatcaagtttgtgaagctc
cacactttgggagataaccttttggattcccggatggaaatcagggaaaagtattactat
gcagtttatgatatggtggttcgaggaaattgcttctgctacggtcatgccagcgaatgc
gcccctgtggatggaatcaatgaagaagtagaaggaatggttcatgggcactgcatgtgc
aggcataataccaagggcttaaactgtgaactgtgcatggatttctaccacgatttacct
tggagacccgctgaaggtcgaaacagcaatgcctgtaaaaagtgtaactgcaatgaacat
tcgagctcgtgccactttgacatggccgtgtacttggccaccggcaatgtcagcggaggg
gtgtgtgatgactgtcagcacaacaccatgggacgcaactgtgaacagtgcaagccgttt
tacttccagcacccggagagagacgtccgagaccctcacctctgtgaacgatgtacctgt
gacccagctggatctcagaatgggggaatctgtgacagttacaccgatttttctgctggc
ctcattgccggccagtgtcggtgtaaattacacgtggaaggagaacattgtgaactttgc
aaagagggcttctacggcttaagtgctgaggatccatttggttgtaaatcttgtgcctgc
aatcctctgggaacgattcctggcggcaatccttgtgattctgagactggttactgctac
tgtaagcgtctggtgacaggacagcattgtgaccagtgtctgccggagcactggggcttg
agcaatgatttggatggatgtcgaccttgtgactgtgaccttggaggggctttaaacaac
agctgttcccctgaatcgggccagtgcgcgtgccgaccgcacgtgatcgggcgtcagtgc
aacgaagtggagtctggttactacttcaccaccttggatcactacatctacgaagcagaa
gaagccaactttgggcccggggtcagcatcgtggagcggcagtacgttcaagaccggatt
ccttcctggacgggagccggcttcgtccgagtgcctgaaggggcttatttggagtttttc
attgacaacataccatattccatggagtatgacatcttaattcgctatgagccacagctc
cccgaccgctgggaaaaagctgtcatcatggtgcagcgacctggaaagatcccaaccagc
agccgatgcggtaataccattcccgatgatgacaaccaggtggtgtccttatcgcctggc
tcaaggtatgtcgtccttccgcgccccgtgtgctttgagaagggtgtgaattacacggtg
aggttagagctgcctcagtacacgtcctccgacagcgacctggagagtccctacacgctt
atcgactcccttgttctcatgccgttttgtaaatcactggatatcttcaccgtgggagga
tcaggggacgggttggtcaccaacagcgcctgggaaacctttcagagatacagatgcctg
gagaacagcagaagcgttgtgaaaacaccaatgaccgacgtgtgcagaaacataatcttc
agcatttctgccctgttacaccagacaggcctggcttgtgaatgtgacccccagggctcc
ttaagttccgtctgcgatcccaatggaggccagtgccagtgccggcccaacgtggttgga
agaacctgcgacagatgtgccccgggcaccttcggctttggccccagtggctgcaaacct
tgtgagtgccacctgcaagggtccgtcaacgccttctgcgaccccatcactggccagtgc
cactgcttccagggggtatatgctcggcagtgtgaccggtgcttgcccggctactggggc
ttccccagctgccagccctgccagtgtaacggccacgccgacgactgtgactctgccacc
ggggcgtgctcgggctgccaggactacaccacggggcacaactgtgaaaggtgcttggcc
ggttactatggcgatcccatcattgggtcaggagatcactgccgcccttgtccttgccca
gatggtcccgacagcggacgccagttcgccaatagctgctatcaagatcctgttacttta
cagcttgcctgtgtctgtaatcccggatacgttggctccagatgtgacgactgtgcctca
ggcttctttggcaatccctcggacgtggggggctcctgtcagccttgcgagtgtcacggc
aacattgacacaacagacccggaagcctgtgacagggagaccggaaggtgccttaagtgc
ctgtaccacacggaaggggaccagtgccagctctgccgactcgggtactatggggatgcg
ctccgccaggactgtcgaaaatgtgtttgcaattacctgggcaccgtgcaggaccactgc
aacggctctgactgccagtgtgacaaaaccaccggtcagtgctcgtgtcttcctaatgtg
gtcgggcagaactgtgaccgctgtgcgcccaacacctggcagctggccagcgggaccggg
tgtgacccgtgcagctgtgatcccgctcattcctttgggccatcttgcaatgagttcacg
gggcagtgccagtgcatgcctgggttcggaggccgcacctgcagcgagtgccaggagctc
ttctggggagaccccaacgtggagtgccgagcctgtgactgtgaccccaggggcatcgag
acaccacagtgtgaccagtccaccggccggtgcgtctgcgtggagggtgtcgagggccca
cgctgtgataaatgcacacgcgggtactcgggggtcttccccgactgcactccctgccac
cagtgctttgccgtgtgggatgtgatcgtcgccgagttgaccaatcggacccagaagttc
ctggagaaagccaaggccctgaagatcagcggcgtgattgggccttaccgggagactgtg
gactcggtggagaagaaagtcaatgagatcagagacatcctggcccagagcccagccacg
gagccactgaagaacatcggggatctctttgaggaagcagagaaattaacgaaagatgtt
acagacaagatggctcaagtagaagtgaaattgtctgacacagcttcccaaagcaacagc
acggccagagaactagattctctacagacagaagcagaaagcctagacaacacagtgaaa
gagcttgctgagcagttggaatttatcaaaaactcagatattcggggcgccttggatagc
atcaccaagtatttccagatgtctctagaggcagaggagagggtgaacgcctccaccaca
gattccaacagcactgtggaccagtcgactctcactcgggacagagtagaagagttgttg
ttggaacgagaatcccagttcagggaaaaacaagaggaacaggcccgccttctggatgaa
ctggcaggcaaactacagagtctagacctttcagccgttgccgagatgacctgtgggacg
cctccgggggcctcttgttccgagaccgagtgtggcggcccgaactgcaggactgacgaa
ggagagaagaagtgtgggggacccggctgcggcggcctggtcacggtcgcccacagtgcc
tggcagaaagccatggactttgaccgcgatgtcctgagcgccctggccgaggtggagcag
ctctccaagatggtctctgaagcgaaactgagggcagacgaggcaaaacaaaatgctcag
gatgttctgcagaaaaccaatgccaccaaagaaaaagtggacaagagcaatgaggacctg
agaaatctgatcaagcaaatccgaaactttttgacccaggatagtgctgatttggacagc
attgaagcagttgctaacgaagtgctgaaaatggaaatgcccagcaccccagagcagtta
cagaacttgacagaagacattcgggagcgagttgaaagcctttctcaagtagaggttatt
ctacagcaaagcgctgctgacattgccagagcagagatgttgctagaagaagctaaaaga
gccagcaaaagtgcaactgatgttaaagtcactgcagacatggtcaaggaggctctggag
gaagcagaaaaggcccagattgcagcagagaaagcaattaaacaagcagatgaagacatc
cagggaacccagaacctgctgacttcgattgagtcggaaacagcggcttcggaggagaac
ttgctcaacgcctcccagcgcatcagcgagcttgagaggaatgtggaagaactgaaacgg
aaggctgcccagaactctggggaggcagaatatattgagaaagtagtatacaccgtgaaa
caaagtgcggatgatgttaagaaggctctggacggtgaagttgatgaaaagtataagaaa
gtagaaaaattaattgcccaaaaaactgaagagtcagctgatgccagaagaaaagctgaa
atgctacaaaatgaagcaaaaacacttttggctcaagcaaacagcaagctgcagctcctg
aaagatttagaaagaaaatatgaggacaatcaaaaatacttagaagataaagctcaagaa
ttagtaagactggaaggagaagtccgttcgctcctcaaggatataagccagaaagttgct
gtttacagcacctgcttgtaa
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integrated database retrieval system